A Curve Fitting Approach Using ANN for Converting CT Number to Linear Attenuation Coefficient for CT-based PET Attenuation Correction
Energy-mapping, the conversion of linear attenuation coefficients (μ) calculated at the effective computed tomography (CT) energy to those corresponding to 511 keV, is an important step in CT-based attenuation correction (CTAC) for positron emission tomography (PET) quantification. The aim of this s...
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description | Energy-mapping, the conversion of linear attenuation coefficients (μ) calculated at the effective computed tomography (CT) energy to those corresponding to 511 keV, is an important step in CT-based attenuation correction (CTAC) for positron emission tomography (PET) quantification. The aim of this study was to implement energy-mapping step by using curve fitting ability of artificial neural network (ANN). Eleven digital phantoms simulated by Geant4 application for tomographic emission (GATE) and 12 physical phantoms composed of various volume concentrations of iodine contrast were used in this study to generate energy-mapping curves by acquiring average CT values and linear attenuation coefficients at 511 keV of these phantoms. The curves were built with ANN toolbox in MATLAB. To evaluate the effectiveness of the proposed method, another two digital phantoms (liver and spine-bone) and three physical phantoms (volume concentrations of 3%, 10% and 20%) were used to compare the energy-mapping curves built by ANN and bilinear transformation, and a semi-quantitative analysis was proceeded by injecting 0.5 mCi FDG into a SD rat for micro-PET scanning. The results showed that the percentage relative difference (PRD) values of digital liver and spine-bone phantom are 5.46% and 1.28% based on ANN, and 19.21% and 1.87% based on bilinear transformation. For 3%, 10% and 20% physical phantoms, the PRD values of ANN curve are 0.91%, 0.70% and 3.70%, and the PRD values of bilinear transformation are 3.80%, 1.44% and 4.30%, respectively. Both digital and physical phantoms indicated that the ANN curve can achieve better performance than bilinear transformation. The semi-quantitative analysis of rat PET images showed that the ANN curve can reduce the inaccuracy caused by attenuation effect from 13.75% to 4.43% in brain tissue, and 23.26% to 9.41% in heart tissue. On the other hand, the inaccuracy remained 6.47% and 11.51% in brain and heart tissue when the bilinear transformation was used. Overall, it can be concluded that the bilinear transformation method resulted in considerable bias and the newly proposed calibration curve built by ANN could achieve better results with acceptable accuracy. |
doi_str_mv | 10.1109/TNS.2014.2375882 |
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The aim of this study was to implement energy-mapping step by using curve fitting ability of artificial neural network (ANN). Eleven digital phantoms simulated by Geant4 application for tomographic emission (GATE) and 12 physical phantoms composed of various volume concentrations of iodine contrast were used in this study to generate energy-mapping curves by acquiring average CT values and linear attenuation coefficients at 511 keV of these phantoms. The curves were built with ANN toolbox in MATLAB. To evaluate the effectiveness of the proposed method, another two digital phantoms (liver and spine-bone) and three physical phantoms (volume concentrations of 3%, 10% and 20%) were used to compare the energy-mapping curves built by ANN and bilinear transformation, and a semi-quantitative analysis was proceeded by injecting 0.5 mCi FDG into a SD rat for micro-PET scanning. The results showed that the percentage relative difference (PRD) values of digital liver and spine-bone phantom are 5.46% and 1.28% based on ANN, and 19.21% and 1.87% based on bilinear transformation. For 3%, 10% and 20% physical phantoms, the PRD values of ANN curve are 0.91%, 0.70% and 3.70%, and the PRD values of bilinear transformation are 3.80%, 1.44% and 4.30%, respectively. Both digital and physical phantoms indicated that the ANN curve can achieve better performance than bilinear transformation. The semi-quantitative analysis of rat PET images showed that the ANN curve can reduce the inaccuracy caused by attenuation effect from 13.75% to 4.43% in brain tissue, and 23.26% to 9.41% in heart tissue. On the other hand, the inaccuracy remained 6.47% and 11.51% in brain and heart tissue when the bilinear transformation was used. Overall, it can be concluded that the bilinear transformation method resulted in considerable bias and the newly proposed calibration curve built by ANN could achieve better results with acceptable accuracy.</description><identifier>ISSN: 0018-9499</identifier><identifier>EISSN: 1558-1578</identifier><identifier>DOI: 10.1109/TNS.2014.2375882</identifier><identifier>CODEN: IETNAE</identifier><language>eng</language><publisher>IEEE</publisher><subject>ANN ; Artificial neural networks ; Attenuation ; attenuation correction ; bilinear transformation ; Computed tomography ; Materials ; PET ; Phantoms ; Photonics ; Positron emission tomography</subject><ispartof>IEEE transactions on nuclear science, 2015-02, Vol.62 (1), p.164-170</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c403t-be1b8d0c4fe4f49c45bc13b30d3346ca3819a377a7ef6a33fd75b4cc5b6c22783</citedby><cites>FETCH-LOGICAL-c403t-be1b8d0c4fe4f49c45bc13b30d3346ca3819a377a7ef6a33fd75b4cc5b6c22783</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://ieeexplore.ieee.org/document/7017593$$EHTML$$P50$$Gieee$$H</linktohtml><link.rule.ids>314,776,780,792,27903,27904,54736</link.rule.ids><linktorsrc>$$Uhttps://ieeexplore.ieee.org/document/7017593$$EView_record_in_IEEE$$FView_record_in_$$GIEEE</linktorsrc></links><search><creatorcontrib>Lai, Chia-Lin</creatorcontrib><creatorcontrib>Lee, Jhih-Shian</creatorcontrib><creatorcontrib>Chen, Jyh-Cheng</creatorcontrib><title>A Curve Fitting Approach Using ANN for Converting CT Number to Linear Attenuation Coefficient for CT-based PET Attenuation Correction</title><title>IEEE transactions on nuclear science</title><addtitle>TNS</addtitle><description>Energy-mapping, the conversion of linear attenuation coefficients (μ) calculated at the effective computed tomography (CT) energy to those corresponding to 511 keV, is an important step in CT-based attenuation correction (CTAC) for positron emission tomography (PET) quantification. The aim of this study was to implement energy-mapping step by using curve fitting ability of artificial neural network (ANN). Eleven digital phantoms simulated by Geant4 application for tomographic emission (GATE) and 12 physical phantoms composed of various volume concentrations of iodine contrast were used in this study to generate energy-mapping curves by acquiring average CT values and linear attenuation coefficients at 511 keV of these phantoms. The curves were built with ANN toolbox in MATLAB. To evaluate the effectiveness of the proposed method, another two digital phantoms (liver and spine-bone) and three physical phantoms (volume concentrations of 3%, 10% and 20%) were used to compare the energy-mapping curves built by ANN and bilinear transformation, and a semi-quantitative analysis was proceeded by injecting 0.5 mCi FDG into a SD rat for micro-PET scanning. The results showed that the percentage relative difference (PRD) values of digital liver and spine-bone phantom are 5.46% and 1.28% based on ANN, and 19.21% and 1.87% based on bilinear transformation. For 3%, 10% and 20% physical phantoms, the PRD values of ANN curve are 0.91%, 0.70% and 3.70%, and the PRD values of bilinear transformation are 3.80%, 1.44% and 4.30%, respectively. Both digital and physical phantoms indicated that the ANN curve can achieve better performance than bilinear transformation. The semi-quantitative analysis of rat PET images showed that the ANN curve can reduce the inaccuracy caused by attenuation effect from 13.75% to 4.43% in brain tissue, and 23.26% to 9.41% in heart tissue. On the other hand, the inaccuracy remained 6.47% and 11.51% in brain and heart tissue when the bilinear transformation was used. Overall, it can be concluded that the bilinear transformation method resulted in considerable bias and the newly proposed calibration curve built by ANN could achieve better results with acceptable accuracy.</description><subject>ANN</subject><subject>Artificial neural networks</subject><subject>Attenuation</subject><subject>attenuation correction</subject><subject>bilinear transformation</subject><subject>Computed tomography</subject><subject>Materials</subject><subject>PET</subject><subject>Phantoms</subject><subject>Photonics</subject><subject>Positron emission tomography</subject><issn>0018-9499</issn><issn>1558-1578</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>RIE</sourceid><recordid>eNpdkEFLwzAYhoMoOKd3wUv-QGfSJEtyLGVTYVTB7lyS9ItGXDvSbOAP8H_bueHB0_e-8Lzf4UHolpIZpUTf19XrLCeUz3ImhVL5GZpQIVRGhVTnaEIIVZnmWl-iq2H4GCsXREzQd4HLXdwDXoaUQveGi-029sa94_XwW6sK-z7isu_2EH-JssbVbmMh4tTjVejARFykBN3OpNB3IwreBxegS8dpnVkzQItfFvU_MEZwh3iNLrz5HODmdKdovVzU5WO2en54KotV5jhhKbNArWqJ4x6459pxYR1llpGWMT53himqDZPSSPBzw5hvpbDcOWHnLs-lYlNEjn9d7Ichgm-2MWxM_GooaQ4am1Fjc9DYnDSOk7vjJADAHy4JlUIz9gPmcG_C</recordid><startdate>20150201</startdate><enddate>20150201</enddate><creator>Lai, Chia-Lin</creator><creator>Lee, Jhih-Shian</creator><creator>Chen, Jyh-Cheng</creator><general>IEEE</general><scope>97E</scope><scope>RIA</scope><scope>RIE</scope><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>20150201</creationdate><title>A Curve Fitting Approach Using ANN for Converting CT Number to Linear Attenuation Coefficient for CT-based PET Attenuation Correction</title><author>Lai, Chia-Lin ; Lee, Jhih-Shian ; Chen, Jyh-Cheng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c403t-be1b8d0c4fe4f49c45bc13b30d3346ca3819a377a7ef6a33fd75b4cc5b6c22783</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>ANN</topic><topic>Artificial neural networks</topic><topic>Attenuation</topic><topic>attenuation correction</topic><topic>bilinear transformation</topic><topic>Computed tomography</topic><topic>Materials</topic><topic>PET</topic><topic>Phantoms</topic><topic>Photonics</topic><topic>Positron emission tomography</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lai, Chia-Lin</creatorcontrib><creatorcontrib>Lee, Jhih-Shian</creatorcontrib><creatorcontrib>Chen, Jyh-Cheng</creatorcontrib><collection>IEEE All-Society Periodicals Package (ASPP) 2005-present</collection><collection>IEEE All-Society Periodicals Package (ASPP) 1998-Present</collection><collection>IEEE Electronic Library (IEL)</collection><collection>CrossRef</collection><jtitle>IEEE transactions on nuclear science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Lai, Chia-Lin</au><au>Lee, Jhih-Shian</au><au>Chen, Jyh-Cheng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Curve Fitting Approach Using ANN for Converting CT Number to Linear Attenuation Coefficient for CT-based PET Attenuation Correction</atitle><jtitle>IEEE transactions on nuclear science</jtitle><stitle>TNS</stitle><date>2015-02-01</date><risdate>2015</risdate><volume>62</volume><issue>1</issue><spage>164</spage><epage>170</epage><pages>164-170</pages><issn>0018-9499</issn><eissn>1558-1578</eissn><coden>IETNAE</coden><abstract>Energy-mapping, the conversion of linear attenuation coefficients (μ) calculated at the effective computed tomography (CT) energy to those corresponding to 511 keV, is an important step in CT-based attenuation correction (CTAC) for positron emission tomography (PET) quantification. The aim of this study was to implement energy-mapping step by using curve fitting ability of artificial neural network (ANN). Eleven digital phantoms simulated by Geant4 application for tomographic emission (GATE) and 12 physical phantoms composed of various volume concentrations of iodine contrast were used in this study to generate energy-mapping curves by acquiring average CT values and linear attenuation coefficients at 511 keV of these phantoms. The curves were built with ANN toolbox in MATLAB. To evaluate the effectiveness of the proposed method, another two digital phantoms (liver and spine-bone) and three physical phantoms (volume concentrations of 3%, 10% and 20%) were used to compare the energy-mapping curves built by ANN and bilinear transformation, and a semi-quantitative analysis was proceeded by injecting 0.5 mCi FDG into a SD rat for micro-PET scanning. The results showed that the percentage relative difference (PRD) values of digital liver and spine-bone phantom are 5.46% and 1.28% based on ANN, and 19.21% and 1.87% based on bilinear transformation. For 3%, 10% and 20% physical phantoms, the PRD values of ANN curve are 0.91%, 0.70% and 3.70%, and the PRD values of bilinear transformation are 3.80%, 1.44% and 4.30%, respectively. Both digital and physical phantoms indicated that the ANN curve can achieve better performance than bilinear transformation. The semi-quantitative analysis of rat PET images showed that the ANN curve can reduce the inaccuracy caused by attenuation effect from 13.75% to 4.43% in brain tissue, and 23.26% to 9.41% in heart tissue. On the other hand, the inaccuracy remained 6.47% and 11.51% in brain and heart tissue when the bilinear transformation was used. Overall, it can be concluded that the bilinear transformation method resulted in considerable bias and the newly proposed calibration curve built by ANN could achieve better results with acceptable accuracy.</abstract><pub>IEEE</pub><doi>10.1109/TNS.2014.2375882</doi><tpages>7</tpages></addata></record> |
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subjects | ANN Artificial neural networks Attenuation attenuation correction bilinear transformation Computed tomography Materials PET Phantoms Photonics Positron emission tomography |
title | A Curve Fitting Approach Using ANN for Converting CT Number to Linear Attenuation Coefficient for CT-based PET Attenuation Correction |
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