Multiple Kernel Learning in the Primal for Multimodal Alzheimer's Disease Classification
To achieve effective and efficient detection of Alzheimer's disease (AD), many machine learning methods have been introduced into this realm. However, the general case of limited training samples, as well as different feature representations typically makes this problem challenging. In this pap...
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Veröffentlicht in: | IEEE journal of biomedical and health informatics 2014-05, Vol.18 (3), p.984-990 |
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description | To achieve effective and efficient detection of Alzheimer's disease (AD), many machine learning methods have been introduced into this realm. However, the general case of limited training samples, as well as different feature representations typically makes this problem challenging. In this paper, we propose a novel multiple kernel-learning framework to combine multimodal features for AD classification, which is scalable and easy to implement. Contrary to the usual way of solving the problem in the dual, we look at the optimization from a new perspective. By conducting Fourier transform on the Gaussian kernel, we explicitly compute the mapping function, which leads to a more straightforward solution of the problem in the primal. Furthermore, we impose the mixed L 21 norm constraint on the kernel weights, known as the group lasso regularization, to enforce group sparsity among different feature modalities. This actually acts as a role of feature modality selection, while at the same time exploiting complementary information among different kernels. Therefore, it is able to extract the most discriminative features for classification. Experiments on the ADNI dataset demonstrate the effectiveness of the proposed method. |
doi_str_mv | 10.1109/JBHI.2013.2285378 |
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However, the general case of limited training samples, as well as different feature representations typically makes this problem challenging. In this paper, we propose a novel multiple kernel-learning framework to combine multimodal features for AD classification, which is scalable and easy to implement. Contrary to the usual way of solving the problem in the dual, we look at the optimization from a new perspective. By conducting Fourier transform on the Gaussian kernel, we explicitly compute the mapping function, which leads to a more straightforward solution of the problem in the primal. Furthermore, we impose the mixed L 21 norm constraint on the kernel weights, known as the group lasso regularization, to enforce group sparsity among different feature modalities. This actually acts as a role of feature modality selection, while at the same time exploiting complementary information among different kernels. Therefore, it is able to extract the most discriminative features for classification. Experiments on the ADNI dataset demonstrate the effectiveness of the proposed method.</description><identifier>ISSN: 2168-2194</identifier><identifier>EISSN: 2168-2208</identifier><identifier>DOI: 10.1109/JBHI.2013.2285378</identifier><identifier>PMID: 24132030</identifier><identifier>CODEN: IJBHA9</identifier><language>eng</language><publisher>United States: IEEE</publisher><subject>Accuracy ; Algorithms ; Alzheimer Disease - cerebrospinal fluid ; Alzheimer Disease - classification ; Alzheimer Disease - pathology ; Alzheimer's disease (AD) ; Artificial Intelligence ; Biomarkers ; Biomarkers - cerebrospinal fluid ; Brain - pathology ; Databases, Factual ; Fourier Analysis ; Fourier transforms ; group Lasso ; Humans ; Kernel ; Magnetic Resonance Imaging ; multimodal features ; multiple kernel learning (MKL) ; random Fourier feature (RFF) ; Support vector machines ; Training</subject><ispartof>IEEE journal of biomedical and health informatics, 2014-05, Vol.18 (3), p.984-990</ispartof><rights>Copyright The Institute of Electrical and Electronics Engineers, Inc. (IEEE) May 2014</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c349t-8c33864596017bc64208b82d74d338da94a6d8a6e32bf5a891a7a3fd7e53e03f3</citedby><cites>FETCH-LOGICAL-c349t-8c33864596017bc64208b82d74d338da94a6d8a6e32bf5a891a7a3fd7e53e03f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://ieeexplore.ieee.org/document/6627945$$EHTML$$P50$$Gieee$$H</linktohtml><link.rule.ids>314,776,780,792,27903,27904,54736</link.rule.ids><linktorsrc>$$Uhttps://ieeexplore.ieee.org/document/6627945$$EView_record_in_IEEE$$FView_record_in_$$GIEEE</linktorsrc><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24132030$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Liu, Fayao</creatorcontrib><creatorcontrib>Zhou, Luping</creatorcontrib><creatorcontrib>Shen, Chunhua</creatorcontrib><creatorcontrib>Yin, Jianping</creatorcontrib><title>Multiple Kernel Learning in the Primal for Multimodal Alzheimer's Disease Classification</title><title>IEEE journal of biomedical and health informatics</title><addtitle>JBHI</addtitle><addtitle>IEEE J Biomed Health Inform</addtitle><description>To achieve effective and efficient detection of Alzheimer's disease (AD), many machine learning methods have been introduced into this realm. However, the general case of limited training samples, as well as different feature representations typically makes this problem challenging. In this paper, we propose a novel multiple kernel-learning framework to combine multimodal features for AD classification, which is scalable and easy to implement. Contrary to the usual way of solving the problem in the dual, we look at the optimization from a new perspective. By conducting Fourier transform on the Gaussian kernel, we explicitly compute the mapping function, which leads to a more straightforward solution of the problem in the primal. Furthermore, we impose the mixed L 21 norm constraint on the kernel weights, known as the group lasso regularization, to enforce group sparsity among different feature modalities. This actually acts as a role of feature modality selection, while at the same time exploiting complementary information among different kernels. Therefore, it is able to extract the most discriminative features for classification. Experiments on the ADNI dataset demonstrate the effectiveness of the proposed method.</description><subject>Accuracy</subject><subject>Algorithms</subject><subject>Alzheimer Disease - cerebrospinal fluid</subject><subject>Alzheimer Disease - classification</subject><subject>Alzheimer Disease - pathology</subject><subject>Alzheimer's disease (AD)</subject><subject>Artificial Intelligence</subject><subject>Biomarkers</subject><subject>Biomarkers - cerebrospinal fluid</subject><subject>Brain - pathology</subject><subject>Databases, Factual</subject><subject>Fourier Analysis</subject><subject>Fourier transforms</subject><subject>group Lasso</subject><subject>Humans</subject><subject>Kernel</subject><subject>Magnetic Resonance Imaging</subject><subject>multimodal features</subject><subject>multiple kernel learning (MKL)</subject><subject>random Fourier feature (RFF)</subject><subject>Support vector machines</subject><subject>Training</subject><issn>2168-2194</issn><issn>2168-2208</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>RIE</sourceid><sourceid>EIF</sourceid><recordid>eNpdkDtPwzAQgC0Egqr0ByAkZIkBlha_4thjKa9CEQwgsUVucqGunKTYyQC_HpcWBryc7-670-lD6IiSEaVEX9xf3k1HjFA-YkwlPFU7qMeoVEPGiNr9_VMtDtAghCWJT8WSlvvogAnKGeGkh94eO9falQP8AL4Gh2dgfG3rd2xr3C4AP3tbGYfLxuMftGqKmI7d1wJsBf4s4CsbwATAE2dCsKXNTWub-hDtlcYFGGxjH73eXL9M7oazp9vpZDwb5lzodqhyzpUUiZaEpvNcinj8XLEiFUVsFEYLIwtlJHA2LxOjNDWp4WWRQsKB8JL30flm78o3Hx2ENqtsyME5U0PThYwmjAsipBYRPf2HLpvO1_G6SAmdCCZTHim6oXLfhOChzFZrBf4zoyRbm8_W5rO1-WxrPs6cbDd38wqKv4lfzxE43gAWAP7aUrJUi4R_A7hHhYs</recordid><startdate>20140501</startdate><enddate>20140501</enddate><creator>Liu, Fayao</creator><creator>Zhou, Luping</creator><creator>Shen, Chunhua</creator><creator>Yin, Jianping</creator><general>IEEE</general><general>The Institute of Electrical and Electronics Engineers, Inc. (IEEE)</general><scope>97E</scope><scope>RIA</scope><scope>RIE</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QF</scope><scope>7QO</scope><scope>7QQ</scope><scope>7SC</scope><scope>7SE</scope><scope>7SP</scope><scope>7SR</scope><scope>7TA</scope><scope>7TB</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>F28</scope><scope>FR3</scope><scope>H8D</scope><scope>JG9</scope><scope>JQ2</scope><scope>K9.</scope><scope>KR7</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>NAPCQ</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20140501</creationdate><title>Multiple Kernel Learning in the Primal for Multimodal Alzheimer's Disease Classification</title><author>Liu, Fayao ; Zhou, Luping ; Shen, Chunhua ; Yin, Jianping</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c349t-8c33864596017bc64208b82d74d338da94a6d8a6e32bf5a891a7a3fd7e53e03f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Accuracy</topic><topic>Algorithms</topic><topic>Alzheimer Disease - cerebrospinal fluid</topic><topic>Alzheimer Disease - classification</topic><topic>Alzheimer Disease - pathology</topic><topic>Alzheimer's disease (AD)</topic><topic>Artificial Intelligence</topic><topic>Biomarkers</topic><topic>Biomarkers - cerebrospinal fluid</topic><topic>Brain - pathology</topic><topic>Databases, Factual</topic><topic>Fourier Analysis</topic><topic>Fourier transforms</topic><topic>group Lasso</topic><topic>Humans</topic><topic>Kernel</topic><topic>Magnetic Resonance Imaging</topic><topic>multimodal features</topic><topic>multiple kernel learning (MKL)</topic><topic>random Fourier feature (RFF)</topic><topic>Support vector machines</topic><topic>Training</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liu, Fayao</creatorcontrib><creatorcontrib>Zhou, Luping</creatorcontrib><creatorcontrib>Shen, Chunhua</creatorcontrib><creatorcontrib>Yin, Jianping</creatorcontrib><collection>IEEE All-Society Periodicals Package (ASPP) 2005-present</collection><collection>IEEE All-Society Periodicals Package (ASPP) 1998-Present</collection><collection>IEEE Electronic Library (IEL)</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Aluminium Industry Abstracts</collection><collection>Biotechnology Research Abstracts</collection><collection>Ceramic Abstracts</collection><collection>Computer and Information Systems Abstracts</collection><collection>Corrosion Abstracts</collection><collection>Electronics & Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Materials Business File</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>ANTE: Abstracts in New Technology & Engineering</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Nursing & Allied Health Premium</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>IEEE journal of biomedical and health informatics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Liu, Fayao</au><au>Zhou, Luping</au><au>Shen, Chunhua</au><au>Yin, Jianping</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Multiple Kernel Learning in the Primal for Multimodal Alzheimer's Disease Classification</atitle><jtitle>IEEE journal of biomedical and health informatics</jtitle><stitle>JBHI</stitle><addtitle>IEEE J Biomed Health Inform</addtitle><date>2014-05-01</date><risdate>2014</risdate><volume>18</volume><issue>3</issue><spage>984</spage><epage>990</epage><pages>984-990</pages><issn>2168-2194</issn><eissn>2168-2208</eissn><coden>IJBHA9</coden><abstract>To achieve effective and efficient detection of Alzheimer's disease (AD), many machine learning methods have been introduced into this realm. However, the general case of limited training samples, as well as different feature representations typically makes this problem challenging. In this paper, we propose a novel multiple kernel-learning framework to combine multimodal features for AD classification, which is scalable and easy to implement. Contrary to the usual way of solving the problem in the dual, we look at the optimization from a new perspective. By conducting Fourier transform on the Gaussian kernel, we explicitly compute the mapping function, which leads to a more straightforward solution of the problem in the primal. Furthermore, we impose the mixed L 21 norm constraint on the kernel weights, known as the group lasso regularization, to enforce group sparsity among different feature modalities. This actually acts as a role of feature modality selection, while at the same time exploiting complementary information among different kernels. Therefore, it is able to extract the most discriminative features for classification. Experiments on the ADNI dataset demonstrate the effectiveness of the proposed method.</abstract><cop>United States</cop><pub>IEEE</pub><pmid>24132030</pmid><doi>10.1109/JBHI.2013.2285378</doi><tpages>7</tpages></addata></record> |
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subjects | Accuracy Algorithms Alzheimer Disease - cerebrospinal fluid Alzheimer Disease - classification Alzheimer Disease - pathology Alzheimer's disease (AD) Artificial Intelligence Biomarkers Biomarkers - cerebrospinal fluid Brain - pathology Databases, Factual Fourier Analysis Fourier transforms group Lasso Humans Kernel Magnetic Resonance Imaging multimodal features multiple kernel learning (MKL) random Fourier feature (RFF) Support vector machines Training |
title | Multiple Kernel Learning in the Primal for Multimodal Alzheimer's Disease Classification |
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