Geometrical Modeling and Visualization of Pre- and Post-Synaptic Structures in Double-Labeled Confocal Images
3-D volume samples of selected dendritic segments are scanned by a confocal laser-scanning microscope to investigate the impact of alterations in the shape of dendritic spines for their synaptic functioning. Double-labeling techniques using green fluorescent protein-labeled neurons and synaptophysin...
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creator | Herzog, A. Krell, G. Michaelis, B. Westerholz, S. Helmeke, C. Braun, K. |
description | 3-D volume samples of selected dendritic segments are scanned by a confocal laser-scanning microscope to investigate the impact of alterations in the shape of dendritic spines for their synaptic functioning. Double-labeling techniques using green fluorescent protein-labeled neurons and synaptophysin-labeled presynaptic terminals allow us to capture images of dendrites and spines in one image channel and the presynaptic boutons in a second image channel. To detect spines and to reconstruct spine shape a parametric model is fitted in the noisy confocal image. Starting with the geometrical model of the spine head, voxels in the second image channel are labeled by a distance map to detect possible associated presynaptic terminals. This method enables a flexible visualization of geometrical models of spines and dendrites together with selected presynapses and an adjustable, distance-dependent quantification of boutons. These functional features are combined with morphological features from the geometrical model for every spine and establish a basis for advanced statistical analysis of the underlying learning processes in brain. The cellular events of changes in spine morphology can be studied in relation to functional properties. |
doi_str_mv | 10.1109/MEDIVIS.2006.12 |
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Double-labeling techniques using green fluorescent protein-labeled neurons and synaptophysin-labeled presynaptic terminals allow us to capture images of dendrites and spines in one image channel and the presynaptic boutons in a second image channel. To detect spines and to reconstruct spine shape a parametric model is fitted in the noisy confocal image. Starting with the geometrical model of the spine head, voxels in the second image channel are labeled by a distance map to detect possible associated presynaptic terminals. This method enables a flexible visualization of geometrical models of spines and dendrites together with selected presynapses and an adjustable, distance-dependent quantification of boutons. These functional features are combined with morphological features from the geometrical model for every spine and establish a basis for advanced statistical analysis of the underlying learning processes in brain. 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The cellular events of changes in spine morphology can be studied in relation to functional properties.</description><subject>Fluorescence</subject><subject>Image reconstruction</subject><subject>Image segmentation</subject><subject>Laser modes</subject><subject>Microscopy</subject><subject>Neurons</subject><subject>Proteins</subject><subject>Shape</subject><subject>Solid modeling</subject><subject>Visualization</subject><isbn>9780769526034</isbn><isbn>0769526039</isbn><fulltext>true</fulltext><rsrctype>conference_proceeding</rsrctype><creationdate>2006</creationdate><recordtype>conference_proceeding</recordtype><sourceid>6IE</sourceid><sourceid>RIE</sourceid><recordid>eNotjr1qwzAYRQWl0JJ67tBFL-BUsmTJGouTpgaHBlyyBtn-FFRsKVjykD593Z-73OFcDhehR0rWlBL1vN9uqmPVrDNCxJpmNyhRsiBSqDwThPE7lITwSZYwlXMm79G4Az9CnGynB7z3PQzWnbF2PT7aMOvBfulovcPe4MME6S85-BDT5ur0JdoON3GauzhPELB1eOPndoC01i0M0OPSO-N_1NWozxAe0K3RQ4Dkv1eoed1-lG9p_b6rypc6tYrENM-lkKKnlLaGFzkVIu8yA8pIWnCu-HKeQd-KYtm1WrAFdrJvNSu0Aa7YCj39WS0AnC6THfV0PVGhaCYk-wazGFds</recordid><startdate>2006</startdate><enddate>2006</enddate><creator>Herzog, A.</creator><creator>Krell, G.</creator><creator>Michaelis, B.</creator><creator>Westerholz, S.</creator><creator>Helmeke, C.</creator><creator>Braun, K.</creator><general>IEEE</general><scope>6IE</scope><scope>6IL</scope><scope>CBEJK</scope><scope>RIE</scope><scope>RIL</scope></search><sort><creationdate>2006</creationdate><title>Geometrical Modeling and Visualization of Pre- and Post-Synaptic Structures in Double-Labeled Confocal Images</title><author>Herzog, A. ; Krell, G. ; Michaelis, B. ; Westerholz, S. ; Helmeke, C. ; Braun, K.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-i90t-557676d111bf4851665c2fe9f71844940393edb68576ba63c2fc7dba38afe493</frbrgroupid><rsrctype>conference_proceedings</rsrctype><prefilter>conference_proceedings</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Fluorescence</topic><topic>Image reconstruction</topic><topic>Image segmentation</topic><topic>Laser modes</topic><topic>Microscopy</topic><topic>Neurons</topic><topic>Proteins</topic><topic>Shape</topic><topic>Solid modeling</topic><topic>Visualization</topic><toplevel>online_resources</toplevel><creatorcontrib>Herzog, A.</creatorcontrib><creatorcontrib>Krell, G.</creatorcontrib><creatorcontrib>Michaelis, B.</creatorcontrib><creatorcontrib>Westerholz, S.</creatorcontrib><creatorcontrib>Helmeke, C.</creatorcontrib><creatorcontrib>Braun, K.</creatorcontrib><collection>IEEE Electronic Library (IEL) Conference Proceedings</collection><collection>IEEE Proceedings Order Plan All Online (POP All Online) 1998-present by volume</collection><collection>IEEE Xplore All Conference Proceedings</collection><collection>IEEE Electronic Library (IEL)</collection><collection>IEEE Proceedings Order Plans (POP All) 1998-Present</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Herzog, A.</au><au>Krell, G.</au><au>Michaelis, B.</au><au>Westerholz, S.</au><au>Helmeke, C.</au><au>Braun, K.</au><format>book</format><genre>proceeding</genre><ristype>CONF</ristype><atitle>Geometrical Modeling and Visualization of Pre- and Post-Synaptic Structures in Double-Labeled Confocal Images</atitle><btitle>International Conference on Medical Information Visualisation - BioMedical Visualisation (MedVis'06)</btitle><stitle>MEDIVIS</stitle><date>2006</date><risdate>2006</risdate><spage>34</spage><epage>38</epage><pages>34-38</pages><isbn>9780769526034</isbn><isbn>0769526039</isbn><abstract>3-D volume samples of selected dendritic segments are scanned by a confocal laser-scanning microscope to investigate the impact of alterations in the shape of dendritic spines for their synaptic functioning. Double-labeling techniques using green fluorescent protein-labeled neurons and synaptophysin-labeled presynaptic terminals allow us to capture images of dendrites and spines in one image channel and the presynaptic boutons in a second image channel. To detect spines and to reconstruct spine shape a parametric model is fitted in the noisy confocal image. Starting with the geometrical model of the spine head, voxels in the second image channel are labeled by a distance map to detect possible associated presynaptic terminals. This method enables a flexible visualization of geometrical models of spines and dendrites together with selected presynapses and an adjustable, distance-dependent quantification of boutons. These functional features are combined with morphological features from the geometrical model for every spine and establish a basis for advanced statistical analysis of the underlying learning processes in brain. 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subjects | Fluorescence Image reconstruction Image segmentation Laser modes Microscopy Neurons Proteins Shape Solid modeling Visualization |
title | Geometrical Modeling and Visualization of Pre- and Post-Synaptic Structures in Double-Labeled Confocal Images |
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