Some initial results on hardware BLAST acceleration with a reconfigurable architecture

The BLAST algorithm is the prevalent tool that is used by molecular biologists for DNA sequence matching and database search. In this work we demonstrate that with an appropriate reconfigurable architecture, BLAST performance can be improved with a single-chip solution 5 times over a specialized and...

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Bibliographische Detailangaben

Hauptverfasser:	Sotiriades, E., Kozanitis, C., Dollas, A.
Format:	Tagungsbericht
Sprache:	eng
Schlagworte:	Acceleration Biology computing Clustering algorithms DNA Engines Hardware Large-scale systems Reconfigurable architectures Sequences
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