Genetic Diversity of Gazelles (Gazella marica and Gazella gazella) in Southeast Turkey: A Special Emphasis on Ongoing Conservation Studies of Gazella marica in Turkey
Objective: The genetic diversity parameters for gazelle populations sampled in Turkey were estimated to assess the effects of captive breeding on the populations' gene pools and effective population sizes. Materials and Methods: Four individuals from a recently discovered Gazella gazella popula...
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Veröffentlicht in: | European Journal of Biology 2019-12, Vol.78 (2), p.89-103 |
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container_title | European Journal of Biology |
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creator | Saatoglu, Fikriye Dilan Oncu, Melis Denizci Emir, Hasan Hatipoglu, Taner Acan, Sinan Can Kankilic, Tolga Togan, Inci Bastanlar, Evren Koban |
description | Objective: The genetic diversity parameters for gazelle populations sampled in Turkey were estimated to assess the effects of captive breeding on the populations' gene pools and effective population sizes. Materials and Methods: Four individuals from a recently discovered Gazella gazella population in Hatay and two captive gazelle populations were sampled (the Kizilkuyu State Farm (n=48) and the Erikce State Farm (n=25)) and analyzed using nuclear DNA, mtDNA and Y-chromosome markers. Results: The mtDNA cyt-b partial sequence analysis assigned the Erikce and Kizilkuyu samples to Gazella marica. The structure analysis differentiated significantly between them, and revealed samples originating from wild population. Both, the Y-chromosome INRA126 locus sequences of Gazella gazella and Gazella marica males and the mtDNA partial cyt-b region RFLP analysis from all the samples distinguished the two gazelle species from each other. Based on microsatellites, the estimated effective population sizes were 9.7, 8.9 and 6.4 for the Kizilkuyu, Erikce and Hatay populations, respectively. When the Kizilkuyu and Erikce populations (where severe inbreeding depressions seems to be occurring already) were pooled, the estimated Ne was 24.5. All these estimates were too small for the sustainability of either individual or pooled populations in the wild or even in captivity. Conclusion: The markers used in the study provided information on two of the gazelle species (Gazella marica, and Gazella gazella): their species identity, degree of divergences, effective population sizes and the presence of admixture within the populations. These results turned out to be invaluable in terms of their contribution to future studies for the conservation of these species. Keywords: Conservation Genetics, Biodiversity, Phylogeny, Microsatellites, mtDNA, Y-Chromosome, RFLP Analysis |
doi_str_mv | 10.26650/EurJBiol.2019.0014 |
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Materials and Methods: Four individuals from a recently discovered Gazella gazella population in Hatay and two captive gazelle populations were sampled (the Kizilkuyu State Farm (n=48) and the Erikce State Farm (n=25)) and analyzed using nuclear DNA, mtDNA and Y-chromosome markers. Results: The mtDNA cyt-b partial sequence analysis assigned the Erikce and Kizilkuyu samples to Gazella marica. The structure analysis differentiated significantly between them, and revealed samples originating from wild population. Both, the Y-chromosome INRA126 locus sequences of Gazella gazella and Gazella marica males and the mtDNA partial cyt-b region RFLP analysis from all the samples distinguished the two gazelle species from each other. Based on microsatellites, the estimated effective population sizes were 9.7, 8.9 and 6.4 for the Kizilkuyu, Erikce and Hatay populations, respectively. When the Kizilkuyu and Erikce populations (where severe inbreeding depressions seems to be occurring already) were pooled, the estimated Ne was 24.5. All these estimates were too small for the sustainability of either individual or pooled populations in the wild or even in captivity. Conclusion: The markers used in the study provided information on two of the gazelle species (Gazella marica, and Gazella gazella): their species identity, degree of divergences, effective population sizes and the presence of admixture within the populations. These results turned out to be invaluable in terms of their contribution to future studies for the conservation of these species. Keywords: Conservation Genetics, Biodiversity, Phylogeny, Microsatellites, mtDNA, Y-Chromosome, RFLP Analysis</description><identifier>ISSN: 2602-2575</identifier><identifier>ISSN: 1300-7041</identifier><identifier>EISSN: 2618-6144</identifier><identifier>DOI: 10.26650/EurJBiol.2019.0014</identifier><language>eng</language><publisher>Istanbul University Press</publisher><subject>Analysis ; Biological diversity conservation ; Biyoloji ; Breeding ; Captive wild animals ; Genetic research ; Phylogeny ; Tıp ; Wildlife conservation</subject><ispartof>European Journal of Biology, 2019-12, Vol.78 (2), p.89-103</ispartof><rights>COPYRIGHT 2019 Istanbul University Press</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3094-9974e1d0e8c6d789ea4f1c0d94d127beee8cdec340dbcaafef264f9083a29ec43</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,860,27901,27902</link.rule.ids></links><search><contributor>Bolkent,Şehnaz</contributor><creatorcontrib>Saatoglu, Fikriye Dilan</creatorcontrib><creatorcontrib>Oncu, Melis Denizci</creatorcontrib><creatorcontrib>Emir, Hasan</creatorcontrib><creatorcontrib>Hatipoglu, Taner</creatorcontrib><creatorcontrib>Acan, Sinan Can</creatorcontrib><creatorcontrib>Kankilic, Tolga</creatorcontrib><creatorcontrib>Togan, Inci</creatorcontrib><creatorcontrib>Bastanlar, Evren Koban</creatorcontrib><title>Genetic Diversity of Gazelles (Gazella marica and Gazella gazella) in Southeast Turkey: A Special Emphasis on Ongoing Conservation Studies of Gazella marica in Turkey</title><title>European Journal of Biology</title><description>Objective: The genetic diversity parameters for gazelle populations sampled in Turkey were estimated to assess the effects of captive breeding on the populations' gene pools and effective population sizes. Materials and Methods: Four individuals from a recently discovered Gazella gazella population in Hatay and two captive gazelle populations were sampled (the Kizilkuyu State Farm (n=48) and the Erikce State Farm (n=25)) and analyzed using nuclear DNA, mtDNA and Y-chromosome markers. Results: The mtDNA cyt-b partial sequence analysis assigned the Erikce and Kizilkuyu samples to Gazella marica. The structure analysis differentiated significantly between them, and revealed samples originating from wild population. Both, the Y-chromosome INRA126 locus sequences of Gazella gazella and Gazella marica males and the mtDNA partial cyt-b region RFLP analysis from all the samples distinguished the two gazelle species from each other. Based on microsatellites, the estimated effective population sizes were 9.7, 8.9 and 6.4 for the Kizilkuyu, Erikce and Hatay populations, respectively. When the Kizilkuyu and Erikce populations (where severe inbreeding depressions seems to be occurring already) were pooled, the estimated Ne was 24.5. All these estimates were too small for the sustainability of either individual or pooled populations in the wild or even in captivity. Conclusion: The markers used in the study provided information on two of the gazelle species (Gazella marica, and Gazella gazella): their species identity, degree of divergences, effective population sizes and the presence of admixture within the populations. These results turned out to be invaluable in terms of their contribution to future studies for the conservation of these species. Keywords: Conservation Genetics, Biodiversity, Phylogeny, Microsatellites, mtDNA, Y-Chromosome, RFLP Analysis</description><subject>Analysis</subject><subject>Biological diversity conservation</subject><subject>Biyoloji</subject><subject>Breeding</subject><subject>Captive wild animals</subject><subject>Genetic research</subject><subject>Phylogeny</subject><subject>Tıp</subject><subject>Wildlife conservation</subject><issn>2602-2575</issn><issn>1300-7041</issn><issn>2618-6144</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNptUcFqGzEQXUoLDWm-oBdBL-lh3ZFWq7V6cx3XTTHk4PQsFGnkKF1LRtoNOB_U76zcbQKFMocZ3rx5D-ZV1XsKMyZEC59WY_r-xcd-xoDKGQDlr6ozJui8FpTz16cZWM3arn1bXeT8AACshRYkPat-rTHg4A258o-Ysh-OJDqy1k_Y95jJ5TRpstfJG010sOQZ2k39I_GBbOM43KPOA7kd0088fiYLsj2g8bonq_3hXmefSQzkJuyiDzuyjCFjetSDL-B2GK0vZi_GL3ZFedJ7V71xus948befVz--rm6X3-rNzfp6udjUpgHJayk7jtQCzo2w3Vyi5o4asJJbyro7xLKwaBoO9s5o7dAxwZ2EeaOZRMOb8-py0vUWdR9D7wOqhzimUFzV9dVqsVG0FYyzQv0wUXe6R-WDi0PSZu-zUQtBQXSStlBYs_-wSlncexMDOl_wfw6a6cCkmHNCpw7Jl3ccFQX1J2_1nLc65a1OeTe_AVqUoPU</recordid><startdate>20191201</startdate><enddate>20191201</enddate><creator>Saatoglu, Fikriye Dilan</creator><creator>Oncu, Melis Denizci</creator><creator>Emir, Hasan</creator><creator>Hatipoglu, Taner</creator><creator>Acan, Sinan Can</creator><creator>Kankilic, Tolga</creator><creator>Togan, Inci</creator><creator>Bastanlar, Evren Koban</creator><general>Istanbul University Press</general><general>İstanbul Üniversitesi Yayınları</general><scope>AAYXX</scope><scope>CITATION</scope><scope>IEBAR</scope></search><sort><creationdate>20191201</creationdate><title>Genetic Diversity of Gazelles (Gazella marica and Gazella gazella) in Southeast Turkey: A Special Emphasis on Ongoing Conservation Studies of Gazella marica in Turkey</title><author>Saatoglu, Fikriye Dilan ; Oncu, Melis Denizci ; Emir, Hasan ; Hatipoglu, Taner ; Acan, Sinan Can ; Kankilic, Tolga ; Togan, Inci ; Bastanlar, Evren Koban</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3094-9974e1d0e8c6d789ea4f1c0d94d127beee8cdec340dbcaafef264f9083a29ec43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Analysis</topic><topic>Biological diversity conservation</topic><topic>Biyoloji</topic><topic>Breeding</topic><topic>Captive wild animals</topic><topic>Genetic research</topic><topic>Phylogeny</topic><topic>Tıp</topic><topic>Wildlife conservation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Saatoglu, Fikriye Dilan</creatorcontrib><creatorcontrib>Oncu, Melis Denizci</creatorcontrib><creatorcontrib>Emir, Hasan</creatorcontrib><creatorcontrib>Hatipoglu, Taner</creatorcontrib><creatorcontrib>Acan, Sinan Can</creatorcontrib><creatorcontrib>Kankilic, Tolga</creatorcontrib><creatorcontrib>Togan, Inci</creatorcontrib><creatorcontrib>Bastanlar, Evren Koban</creatorcontrib><collection>CrossRef</collection><collection>Idealonline online kütüphane - Journals</collection><jtitle>European Journal of Biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Saatoglu, Fikriye Dilan</au><au>Oncu, Melis Denizci</au><au>Emir, Hasan</au><au>Hatipoglu, Taner</au><au>Acan, Sinan Can</au><au>Kankilic, Tolga</au><au>Togan, Inci</au><au>Bastanlar, Evren Koban</au><au>Bolkent,Şehnaz</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic Diversity of Gazelles (Gazella marica and Gazella gazella) in Southeast Turkey: A Special Emphasis on Ongoing Conservation Studies of Gazella marica in Turkey</atitle><jtitle>European Journal of Biology</jtitle><date>2019-12-01</date><risdate>2019</risdate><volume>78</volume><issue>2</issue><spage>89</spage><epage>103</epage><pages>89-103</pages><issn>2602-2575</issn><issn>1300-7041</issn><eissn>2618-6144</eissn><abstract>Objective: The genetic diversity parameters for gazelle populations sampled in Turkey were estimated to assess the effects of captive breeding on the populations' gene pools and effective population sizes. Materials and Methods: Four individuals from a recently discovered Gazella gazella population in Hatay and two captive gazelle populations were sampled (the Kizilkuyu State Farm (n=48) and the Erikce State Farm (n=25)) and analyzed using nuclear DNA, mtDNA and Y-chromosome markers. Results: The mtDNA cyt-b partial sequence analysis assigned the Erikce and Kizilkuyu samples to Gazella marica. The structure analysis differentiated significantly between them, and revealed samples originating from wild population. Both, the Y-chromosome INRA126 locus sequences of Gazella gazella and Gazella marica males and the mtDNA partial cyt-b region RFLP analysis from all the samples distinguished the two gazelle species from each other. Based on microsatellites, the estimated effective population sizes were 9.7, 8.9 and 6.4 for the Kizilkuyu, Erikce and Hatay populations, respectively. When the Kizilkuyu and Erikce populations (where severe inbreeding depressions seems to be occurring already) were pooled, the estimated Ne was 24.5. All these estimates were too small for the sustainability of either individual or pooled populations in the wild or even in captivity. Conclusion: The markers used in the study provided information on two of the gazelle species (Gazella marica, and Gazella gazella): their species identity, degree of divergences, effective population sizes and the presence of admixture within the populations. These results turned out to be invaluable in terms of their contribution to future studies for the conservation of these species. Keywords: Conservation Genetics, Biodiversity, Phylogeny, Microsatellites, mtDNA, Y-Chromosome, RFLP Analysis</abstract><pub>Istanbul University Press</pub><doi>10.26650/EurJBiol.2019.0014</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Analysis Biological diversity conservation Biyoloji Breeding Captive wild animals Genetic research Phylogeny Tıp Wildlife conservation |
title | Genetic Diversity of Gazelles (Gazella marica and Gazella gazella) in Southeast Turkey: A Special Emphasis on Ongoing Conservation Studies of Gazella marica in Turkey |
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