The mutational spectrum of HRAS, KRAS, NRAS and FGFR3 genes in bladder cancer
Bladder cancer is one of the most common cancers worldwide. A number of genetic and epigenetic alterations have been identified in bladder tumorigenesis, including activating mutations in fibroblast growth factor receptor 3 (FGFR3) and RAS family genes. In this study, we have analysed the mutational...
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Veröffentlicht in: | Cancer biomarkers : section A of Disease markers 2011-01, Vol.10 (6), p.259-266 |
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description | Bladder cancer is one of the most common cancers worldwide. A number of genetic and epigenetic alterations have been identified in bladder tumorigenesis, including activating mutations in fibroblast growth factor receptor 3 (FGFR3) and RAS family genes. In this study, we have analysed the mutational spectrum of FGFR3 and RAS genes (HRAS, NRAS and KRAS). We have also studied the relationship between mutations. A total of 234 patients with different stages and grades were included in the present study (58 superficial low-grade, 53 superficial high-grade and 123 muscle-invasive tumours). Mutations in exons 1 and 2 of HRAS, KRAS and NRAS genes were screened by PCR and direct sequencing. The hot spot mutations in exons 7, 10 and 15 of the FGFR3 oncogene were studied by multiplex PCR and the SNaP-shot protocol. Overall, 8.97% (21/234) of samples were mutant for one of the RAS genes. Among these mutations 47.61% were detected in KRAS, 33.33% in HRAS and only 19.04% most frequent RAS mutations were KRAS p.G12C and p.G12D. The correlation between RAS mutations and tumour subgroups does not report a statistical significant association (p=0.876). The FGFR3 mutations were detected in 31.19% (73/234) of bladder tumours and were associated with low stages and grades. The study of relationship between RAS and FGFR3 genes revealed that FGFR3 mutations were mutually exclusive with RAS ones (p=10(-4)). In conclusion we retain that activated RAS and FGFR3 do not appear to be drivers in bladder cancer but the mutually exclusive relationship between RAS and FGFR3 mutations indicates a possible clonal advantage of modified signaling via a common pathway. |
doi_str_mv | 10.3233/CBM-2012-0254 |
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A number of genetic and epigenetic alterations have been identified in bladder tumorigenesis, including activating mutations in fibroblast growth factor receptor 3 (FGFR3) and RAS family genes. In this study, we have analysed the mutational spectrum of FGFR3 and RAS genes (HRAS, NRAS and KRAS). We have also studied the relationship between mutations. A total of 234 patients with different stages and grades were included in the present study (58 superficial low-grade, 53 superficial high-grade and 123 muscle-invasive tumours). Mutations in exons 1 and 2 of HRAS, KRAS and NRAS genes were screened by PCR and direct sequencing. The hot spot mutations in exons 7, 10 and 15 of the FGFR3 oncogene were studied by multiplex PCR and the SNaP-shot protocol. Overall, 8.97% (21/234) of samples were mutant for one of the RAS genes. Among these mutations 47.61% were detected in KRAS, 33.33% in HRAS and only 19.04% most frequent RAS mutations were KRAS p.G12C and p.G12D. The correlation between RAS mutations and tumour subgroups does not report a statistical significant association (p=0.876). The FGFR3 mutations were detected in 31.19% (73/234) of bladder tumours and were associated with low stages and grades. The study of relationship between RAS and FGFR3 genes revealed that FGFR3 mutations were mutually exclusive with RAS ones (p=10(-4)). In conclusion we retain that activated RAS and FGFR3 do not appear to be drivers in bladder cancer but the mutually exclusive relationship between RAS and FGFR3 mutations indicates a possible clonal advantage of modified signaling via a common pathway.</description><identifier>ISSN: 1574-0153</identifier><identifier>EISSN: 1875-8592</identifier><identifier>DOI: 10.3233/CBM-2012-0254</identifier><identifier>PMID: 22820081</identifier><language>eng</language><publisher>Netherlands: IOS Press</publisher><subject>DNA Mutational Analysis ; Gene Frequency ; Genetic Association Studies ; Humans ; Mutation, Missense ; Proto-Oncogene Proteins ; Proto-Oncogene Proteins - genetics ; Proto-Oncogene Proteins p21(ras) ; Proto-Oncogene Proteins p21(ras) - genetics ; ras Proteins ; ras Proteins - genetics ; Receptor, Fibroblast Growth Factor, Type 3 ; Receptor, Fibroblast Growth Factor, Type 3 - genetics ; Urinary Bladder Neoplasms ; Urinary Bladder Neoplasms - genetics</subject><ispartof>Cancer biomarkers : section A of Disease markers, 2011-01, Vol.10 (6), p.259-266</ispartof><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c430t-c1c3a29f6e6cba17a549b5549ef3bfffff5631cac236c3a817159fd094b2fd433</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27922,27923</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22820081$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://riip.hal.science/pasteur-00879650$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Ouerhani, Slah</creatorcontrib><creatorcontrib>Elgaaied, Amel Ben Ammar</creatorcontrib><title>The mutational spectrum of HRAS, KRAS, NRAS and FGFR3 genes in bladder cancer</title><title>Cancer biomarkers : section A of Disease markers</title><addtitle>Cancer Biomark</addtitle><description>Bladder cancer is one of the most common cancers worldwide. A number of genetic and epigenetic alterations have been identified in bladder tumorigenesis, including activating mutations in fibroblast growth factor receptor 3 (FGFR3) and RAS family genes. In this study, we have analysed the mutational spectrum of FGFR3 and RAS genes (HRAS, NRAS and KRAS). We have also studied the relationship between mutations. A total of 234 patients with different stages and grades were included in the present study (58 superficial low-grade, 53 superficial high-grade and 123 muscle-invasive tumours). Mutations in exons 1 and 2 of HRAS, KRAS and NRAS genes were screened by PCR and direct sequencing. The hot spot mutations in exons 7, 10 and 15 of the FGFR3 oncogene were studied by multiplex PCR and the SNaP-shot protocol. Overall, 8.97% (21/234) of samples were mutant for one of the RAS genes. Among these mutations 47.61% were detected in KRAS, 33.33% in HRAS and only 19.04% most frequent RAS mutations were KRAS p.G12C and p.G12D. The correlation between RAS mutations and tumour subgroups does not report a statistical significant association (p=0.876). The FGFR3 mutations were detected in 31.19% (73/234) of bladder tumours and were associated with low stages and grades. The study of relationship between RAS and FGFR3 genes revealed that FGFR3 mutations were mutually exclusive with RAS ones (p=10(-4)). In conclusion we retain that activated RAS and FGFR3 do not appear to be drivers in bladder cancer but the mutually exclusive relationship between RAS and FGFR3 mutations indicates a possible clonal advantage of modified signaling via a common pathway.</description><subject>DNA Mutational Analysis</subject><subject>Gene Frequency</subject><subject>Genetic Association Studies</subject><subject>Humans</subject><subject>Mutation, Missense</subject><subject>Proto-Oncogene Proteins</subject><subject>Proto-Oncogene Proteins - genetics</subject><subject>Proto-Oncogene Proteins p21(ras)</subject><subject>Proto-Oncogene Proteins p21(ras) - genetics</subject><subject>ras Proteins</subject><subject>ras Proteins - genetics</subject><subject>Receptor, Fibroblast Growth Factor, Type 3</subject><subject>Receptor, Fibroblast Growth Factor, Type 3 - genetics</subject><subject>Urinary Bladder Neoplasms</subject><subject>Urinary Bladder Neoplasms - genetics</subject><issn>1574-0153</issn><issn>1875-8592</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkTtPwzAURi0EouUxsiKPDBj8TOKxVLRFtCCVMluO49CgPIqdIPHvcWgpI3f4roejT9c6AFwQfMMoY7fjuwWimFCEqeAHYEiSWKBESHoY3iLmCBPBBuDE-3eMOSNUHoMBpQnFOCFDsFitLay6VrdFU-sS-o01resq2ORwthy9XMPHn3wKCXWdwcl0smTwzdbWw6KGaamzzDpodG2sOwNHuS69Pd_tU_A6uV-NZ2j-PH0Yj-bIcIZbZIhhmso8spFJNYm14DIVIWzO0rwfETFitKEsCmRCYiJknmHJU5pnnLFTgLa9a12qjSsq7b5Uows1G83VRvvWdk6FD8YyEviTBP5qy29c89FZ36qq8MaWpa5t03lFOJOUyjhm_6OYxlHoldHfFcY13jub708hWPVyVJCjejmqlxP4y111l1Y229O_Ntg3Qf6F-w</recordid><startdate>20110101</startdate><enddate>20110101</enddate><creator>Ouerhani, Slah</creator><creator>Elgaaied, Amel Ben Ammar</creator><general>IOS Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7TO</scope><scope>H94</scope><scope>1XC</scope></search><sort><creationdate>20110101</creationdate><title>The mutational spectrum of HRAS, KRAS, NRAS and FGFR3 genes in bladder cancer</title><author>Ouerhani, Slah ; Elgaaied, Amel Ben Ammar</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c430t-c1c3a29f6e6cba17a549b5549ef3bfffff5631cac236c3a817159fd094b2fd433</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>DNA Mutational Analysis</topic><topic>Gene Frequency</topic><topic>Genetic Association Studies</topic><topic>Humans</topic><topic>Mutation, Missense</topic><topic>Proto-Oncogene Proteins</topic><topic>Proto-Oncogene Proteins - genetics</topic><topic>Proto-Oncogene Proteins p21(ras)</topic><topic>Proto-Oncogene Proteins p21(ras) - genetics</topic><topic>ras Proteins</topic><topic>ras Proteins - genetics</topic><topic>Receptor, Fibroblast Growth Factor, Type 3</topic><topic>Receptor, Fibroblast Growth Factor, Type 3 - genetics</topic><topic>Urinary Bladder Neoplasms</topic><topic>Urinary Bladder Neoplasms - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ouerhani, Slah</creatorcontrib><creatorcontrib>Elgaaied, Amel Ben Ammar</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Cancer biomarkers : section A of Disease markers</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ouerhani, Slah</au><au>Elgaaied, Amel Ben Ammar</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The mutational spectrum of HRAS, KRAS, NRAS and FGFR3 genes in bladder cancer</atitle><jtitle>Cancer biomarkers : section A of Disease markers</jtitle><addtitle>Cancer Biomark</addtitle><date>2011-01-01</date><risdate>2011</risdate><volume>10</volume><issue>6</issue><spage>259</spage><epage>266</epage><pages>259-266</pages><issn>1574-0153</issn><eissn>1875-8592</eissn><abstract>Bladder cancer is one of the most common cancers worldwide. A number of genetic and epigenetic alterations have been identified in bladder tumorigenesis, including activating mutations in fibroblast growth factor receptor 3 (FGFR3) and RAS family genes. In this study, we have analysed the mutational spectrum of FGFR3 and RAS genes (HRAS, NRAS and KRAS). We have also studied the relationship between mutations. A total of 234 patients with different stages and grades were included in the present study (58 superficial low-grade, 53 superficial high-grade and 123 muscle-invasive tumours). Mutations in exons 1 and 2 of HRAS, KRAS and NRAS genes were screened by PCR and direct sequencing. The hot spot mutations in exons 7, 10 and 15 of the FGFR3 oncogene were studied by multiplex PCR and the SNaP-shot protocol. Overall, 8.97% (21/234) of samples were mutant for one of the RAS genes. Among these mutations 47.61% were detected in KRAS, 33.33% in HRAS and only 19.04% most frequent RAS mutations were KRAS p.G12C and p.G12D. The correlation between RAS mutations and tumour subgroups does not report a statistical significant association (p=0.876). The FGFR3 mutations were detected in 31.19% (73/234) of bladder tumours and were associated with low stages and grades. The study of relationship between RAS and FGFR3 genes revealed that FGFR3 mutations were mutually exclusive with RAS ones (p=10(-4)). In conclusion we retain that activated RAS and FGFR3 do not appear to be drivers in bladder cancer but the mutually exclusive relationship between RAS and FGFR3 mutations indicates a possible clonal advantage of modified signaling via a common pathway.</abstract><cop>Netherlands</cop><pub>IOS Press</pub><pmid>22820081</pmid><doi>10.3233/CBM-2012-0254</doi><tpages>8</tpages></addata></record> |
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subjects | DNA Mutational Analysis Gene Frequency Genetic Association Studies Humans Mutation, Missense Proto-Oncogene Proteins Proto-Oncogene Proteins - genetics Proto-Oncogene Proteins p21(ras) Proto-Oncogene Proteins p21(ras) - genetics ras Proteins ras Proteins - genetics Receptor, Fibroblast Growth Factor, Type 3 Receptor, Fibroblast Growth Factor, Type 3 - genetics Urinary Bladder Neoplasms Urinary Bladder Neoplasms - genetics |
title | The mutational spectrum of HRAS, KRAS, NRAS and FGFR3 genes in bladder cancer |
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