Organization and regulation of the arsenite oxidase operon of the moderately acidophilic and facultative chemoautotrophic Thiomonas arsenitoxydans
Thiomonas arsenitoxydans is an acidophilic and facultatively autotrophic bacterium that can grow by oxidizing arsenite to arsenate. A comparative genomic analysis showed that the T. arsenitoxydans aioBA cluster encoding the two subunits of arsenite oxidase is distinct from the other clusters, with t...
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Veröffentlicht in: | Extremophiles : life under extreme conditions 2013-11, Vol.17 (6), p.911-920 |
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creator | Slyemi, Djamila Moinier, Danielle Talla, Emmanuel Bonnefoy, Violaine |
description | Thiomonas arsenitoxydans
is an acidophilic and facultatively autotrophic bacterium that can grow by oxidizing arsenite to arsenate. A comparative genomic analysis showed that the
T. arsenitoxydans
aioBA
cluster encoding the two subunits of arsenite oxidase is distinct from the other clusters, with two specific genes encoding a cytochrome
c
and a metalloregulator belonging to the ArsR/SmtB family. These genes are cotranscribed with
aioBA
, suggesting that these cytochromes
c
are involved in arsenite oxidation and that this operon is controlled by the metalloregulator. The growth of
T. arsenitoxydans
in the presence of thiosulfate and arsenite, or arsenate, is biphasic. Real-time PCR experiments showed that the operon is transcribed during the second growth phase in the presence of arsenite or arsenate, whereas antimonite had no effect. These results suggest that the expression of the
aioBA
operon of
T. arsenitoxydans
is regulated by the electron donor present in the medium, i.e., is induced in the presence of arsenic but is repressed by more energetic substrates. Our data indicate that the genetic organization and regulation of the
aioBA
operon of
T. arsenitoxydans
differ from those of the other arsenite oxidizers. |
doi_str_mv | 10.1007/s00792-013-0573-1 |
format | Article |
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is an acidophilic and facultatively autotrophic bacterium that can grow by oxidizing arsenite to arsenate. A comparative genomic analysis showed that the
T. arsenitoxydans
aioBA
cluster encoding the two subunits of arsenite oxidase is distinct from the other clusters, with two specific genes encoding a cytochrome
c
and a metalloregulator belonging to the ArsR/SmtB family. These genes are cotranscribed with
aioBA
, suggesting that these cytochromes
c
are involved in arsenite oxidation and that this operon is controlled by the metalloregulator. The growth of
T. arsenitoxydans
in the presence of thiosulfate and arsenite, or arsenate, is biphasic. Real-time PCR experiments showed that the operon is transcribed during the second growth phase in the presence of arsenite or arsenate, whereas antimonite had no effect. These results suggest that the expression of the
aioBA
operon of
T. arsenitoxydans
is regulated by the electron donor present in the medium, i.e., is induced in the presence of arsenic but is repressed by more energetic substrates. Our data indicate that the genetic organization and regulation of the
aioBA
operon of
T. arsenitoxydans
differ from those of the other arsenite oxidizers.</description><identifier>ISSN: 1431-0651</identifier><identifier>EISSN: 1433-4909</identifier><identifier>DOI: 10.1007/s00792-013-0573-1</identifier><identifier>PMID: 23974983</identifier><language>eng</language><publisher>Tokyo: Springer Japan</publisher><subject>Antimony - metabolism ; Arsenates - metabolism ; Arsenic ; Arsenic - metabolism ; Arsenites - metabolism ; Bacteria ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; Base Sequence ; Betaproteobacteria - enzymology ; Betaproteobacteria - genetics ; Betaproteobacteria - metabolism ; Biochemistry ; Biomedical and Life Sciences ; Biotechnology ; Enzymes ; Genes, Bacterial ; Genetics ; Life Sciences ; Microbial Ecology ; Microbiology ; Microbiology and Parasitology ; Molecular Sequence Data ; Operon ; Original Paper ; Oxidoreductases - genetics ; Oxidoreductases - metabolism ; Space life sciences</subject><ispartof>Extremophiles : life under extreme conditions, 2013-11, Vol.17 (6), p.911-920</ispartof><rights>Springer Japan 2013</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c439t-2722a9c3436b5c304acfe4dbfeb2abce6cea061b7eb9c8318bd5adac28a290633</citedby><cites>FETCH-LOGICAL-c439t-2722a9c3436b5c304acfe4dbfeb2abce6cea061b7eb9c8318bd5adac28a290633</cites><orcidid>0000-0002-6008-8476 ; 0000-0002-7775-8296</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00792-013-0573-1$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00792-013-0573-1$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,780,784,885,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23974983$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-04577859$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Slyemi, Djamila</creatorcontrib><creatorcontrib>Moinier, Danielle</creatorcontrib><creatorcontrib>Talla, Emmanuel</creatorcontrib><creatorcontrib>Bonnefoy, Violaine</creatorcontrib><title>Organization and regulation of the arsenite oxidase operon of the moderately acidophilic and facultative chemoautotrophic Thiomonas arsenitoxydans</title><title>Extremophiles : life under extreme conditions</title><addtitle>Extremophiles</addtitle><addtitle>Extremophiles</addtitle><description>Thiomonas arsenitoxydans
is an acidophilic and facultatively autotrophic bacterium that can grow by oxidizing arsenite to arsenate. A comparative genomic analysis showed that the
T. arsenitoxydans
aioBA
cluster encoding the two subunits of arsenite oxidase is distinct from the other clusters, with two specific genes encoding a cytochrome
c
and a metalloregulator belonging to the ArsR/SmtB family. These genes are cotranscribed with
aioBA
, suggesting that these cytochromes
c
are involved in arsenite oxidation and that this operon is controlled by the metalloregulator. The growth of
T. arsenitoxydans
in the presence of thiosulfate and arsenite, or arsenate, is biphasic. Real-time PCR experiments showed that the operon is transcribed during the second growth phase in the presence of arsenite or arsenate, whereas antimonite had no effect. These results suggest that the expression of the
aioBA
operon of
T. arsenitoxydans
is regulated by the electron donor present in the medium, i.e., is induced in the presence of arsenic but is repressed by more energetic substrates. Our data indicate that the genetic organization and regulation of the
aioBA
operon of
T. arsenitoxydans
differ from those of the other arsenite oxidizers.</description><subject>Antimony - metabolism</subject><subject>Arsenates - metabolism</subject><subject>Arsenic</subject><subject>Arsenic - metabolism</subject><subject>Arsenites - metabolism</subject><subject>Bacteria</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>Base Sequence</subject><subject>Betaproteobacteria - enzymology</subject><subject>Betaproteobacteria - genetics</subject><subject>Betaproteobacteria - metabolism</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Enzymes</subject><subject>Genes, Bacterial</subject><subject>Genetics</subject><subject>Life Sciences</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Microbiology and Parasitology</subject><subject>Molecular Sequence Data</subject><subject>Operon</subject><subject>Original Paper</subject><subject>Oxidoreductases - 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metabolism</topic><topic>Arsenates - metabolism</topic><topic>Arsenic</topic><topic>Arsenic - metabolism</topic><topic>Arsenites - metabolism</topic><topic>Bacteria</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>Base Sequence</topic><topic>Betaproteobacteria - enzymology</topic><topic>Betaproteobacteria - genetics</topic><topic>Betaproteobacteria - metabolism</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Enzymes</topic><topic>Genes, Bacterial</topic><topic>Genetics</topic><topic>Life Sciences</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Microbiology and Parasitology</topic><topic>Molecular Sequence Data</topic><topic>Operon</topic><topic>Original Paper</topic><topic>Oxidoreductases - genetics</topic><topic>Oxidoreductases - metabolism</topic><topic>Space life sciences</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Slyemi, Djamila</creatorcontrib><creatorcontrib>Moinier, Danielle</creatorcontrib><creatorcontrib>Talla, Emmanuel</creatorcontrib><creatorcontrib>Bonnefoy, Violaine</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Extremophiles : life under extreme conditions</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Slyemi, Djamila</au><au>Moinier, Danielle</au><au>Talla, Emmanuel</au><au>Bonnefoy, Violaine</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Organization and regulation of the arsenite oxidase operon of the moderately acidophilic and facultative chemoautotrophic Thiomonas arsenitoxydans</atitle><jtitle>Extremophiles : life under extreme conditions</jtitle><stitle>Extremophiles</stitle><addtitle>Extremophiles</addtitle><date>2013-11-01</date><risdate>2013</risdate><volume>17</volume><issue>6</issue><spage>911</spage><epage>920</epage><pages>911-920</pages><issn>1431-0651</issn><eissn>1433-4909</eissn><abstract>Thiomonas arsenitoxydans
is an acidophilic and facultatively autotrophic bacterium that can grow by oxidizing arsenite to arsenate. A comparative genomic analysis showed that the
T. arsenitoxydans
aioBA
cluster encoding the two subunits of arsenite oxidase is distinct from the other clusters, with two specific genes encoding a cytochrome
c
and a metalloregulator belonging to the ArsR/SmtB family. These genes are cotranscribed with
aioBA
, suggesting that these cytochromes
c
are involved in arsenite oxidation and that this operon is controlled by the metalloregulator. The growth of
T. arsenitoxydans
in the presence of thiosulfate and arsenite, or arsenate, is biphasic. Real-time PCR experiments showed that the operon is transcribed during the second growth phase in the presence of arsenite or arsenate, whereas antimonite had no effect. These results suggest that the expression of the
aioBA
operon of
T. arsenitoxydans
is regulated by the electron donor present in the medium, i.e., is induced in the presence of arsenic but is repressed by more energetic substrates. Our data indicate that the genetic organization and regulation of the
aioBA
operon of
T. arsenitoxydans
differ from those of the other arsenite oxidizers.</abstract><cop>Tokyo</cop><pub>Springer Japan</pub><pmid>23974983</pmid><doi>10.1007/s00792-013-0573-1</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0002-6008-8476</orcidid><orcidid>https://orcid.org/0000-0002-7775-8296</orcidid></addata></record> |
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ispartof | Extremophiles : life under extreme conditions, 2013-11, Vol.17 (6), p.911-920 |
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language | eng |
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source | MEDLINE; SpringerLink Journals - AutoHoldings |
subjects | Antimony - metabolism Arsenates - metabolism Arsenic Arsenic - metabolism Arsenites - metabolism Bacteria Bacterial Proteins - genetics Bacterial Proteins - metabolism Base Sequence Betaproteobacteria - enzymology Betaproteobacteria - genetics Betaproteobacteria - metabolism Biochemistry Biomedical and Life Sciences Biotechnology Enzymes Genes, Bacterial Genetics Life Sciences Microbial Ecology Microbiology Microbiology and Parasitology Molecular Sequence Data Operon Original Paper Oxidoreductases - genetics Oxidoreductases - metabolism Space life sciences |
title | Organization and regulation of the arsenite oxidase operon of the moderately acidophilic and facultative chemoautotrophic Thiomonas arsenitoxydans |
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