Deep Learning‐Based Analysis of Aortic Morphology From Three‐Dimensional MRI

Background Quantification of aortic morphology plays an important role in the evaluation and follow‐up assessment of patients with aortic diseases, but often requires labor‐intensive and operator‐dependent measurements. Automatic solutions would help enhance their quality and reproducibility. Purpos...

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Veröffentlicht in:Journal of magnetic resonance imaging 2024-10, Vol.60 (4), p.1565-1576
Hauptverfasser: Guo, Jia, Bouaou, Kevin, Houriez‐‐Gombaud‐Saintonge, Sophia, Gueda, Moussa, Gencer, Umit, Nguyen, Vincent, Charpentier, Etienne, Soulat, Gilles, Redheuil, Alban, Mousseaux, Elie, Kachenoura, Nadjia, Dietenbeck, Thomas
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container_issue 4
container_start_page 1565
container_title Journal of magnetic resonance imaging
container_volume 60
creator Guo, Jia
Bouaou, Kevin
Houriez‐‐Gombaud‐Saintonge, Sophia
Gueda, Moussa
Gencer, Umit
Nguyen, Vincent
Charpentier, Etienne
Soulat, Gilles
Redheuil, Alban
Mousseaux, Elie
Kachenoura, Nadjia
Dietenbeck, Thomas
description Background Quantification of aortic morphology plays an important role in the evaluation and follow‐up assessment of patients with aortic diseases, but often requires labor‐intensive and operator‐dependent measurements. Automatic solutions would help enhance their quality and reproducibility. Purpose To design a deep learning (DL)‐based automated approach for aortic landmarks and lumen detection derived from three‐dimensional (3D) MRI. Study Type Retrospective. Population Three hundred ninety‐one individuals (female: 47%, age = 51.9 ± 18.4) from three sites, including healthy subjects and patients (hypertension, aortic dilation, Turner syndrome), randomly divided into training/validation/test datasets (N = 236/77/78). Twenty‐five subjects were randomly selected and analyzed by three operators with different levels of expertise. Field Strength/Sequence 1.5‐T and 3‐T, 3D spoiled gradient‐recalled or steady‐state free precession sequences. Assessment Reinforcement learning and a two‐stage network trained using reference landmarks and segmentation from an existing semi‐automatic software were used for aortic landmark detection and segmentation from sinotubular junction to coeliac trunk. Aortic segments were defined using the detected landmarks while the aortic centerline was extracted from the segmentation and morphological indices (length, aortic diameter, and volume) were computed for both the reference and the proposed segmentations. Statistical Tests Segmentation: Dice similarity coefficient (DSC), Hausdorff distance (HD), average symmetrical surface distance (ASSD); landmark detection: Euclidian distance (ED); model robustness: Spearman correlation, Bland–Altman analysis, Kruskal–Wallis test for comparisons between reference and DL‐derived aortic indices; inter‐observer study: Williams index (WI). A WI 95% confidence interval (CI) lower bound >1 indicates that the method is within the inter‐observer variability. A P‐value 0.95, mean bias
doi_str_mv 10.1002/jmri.29236
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Automatic solutions would help enhance their quality and reproducibility. Purpose To design a deep learning (DL)‐based automated approach for aortic landmarks and lumen detection derived from three‐dimensional (3D) MRI. Study Type Retrospective. Population Three hundred ninety‐one individuals (female: 47%, age = 51.9 ± 18.4) from three sites, including healthy subjects and patients (hypertension, aortic dilation, Turner syndrome), randomly divided into training/validation/test datasets (N = 236/77/78). Twenty‐five subjects were randomly selected and analyzed by three operators with different levels of expertise. Field Strength/Sequence 1.5‐T and 3‐T, 3D spoiled gradient‐recalled or steady‐state free precession sequences. Assessment Reinforcement learning and a two‐stage network trained using reference landmarks and segmentation from an existing semi‐automatic software were used for aortic landmark detection and segmentation from sinotubular junction to coeliac trunk. Aortic segments were defined using the detected landmarks while the aortic centerline was extracted from the segmentation and morphological indices (length, aortic diameter, and volume) were computed for both the reference and the proposed segmentations. Statistical Tests Segmentation: Dice similarity coefficient (DSC), Hausdorff distance (HD), average symmetrical surface distance (ASSD); landmark detection: Euclidian distance (ED); model robustness: Spearman correlation, Bland–Altman analysis, Kruskal–Wallis test for comparisons between reference and DL‐derived aortic indices; inter‐observer study: Williams index (WI). A WI 95% confidence interval (CI) lower bound &gt;1 indicates that the method is within the inter‐observer variability. A P‐value &lt;0.05 was considered statistically significant. Results DSC was 0.90 ± 0.05, HD was 12.11 ± 7.79 mm, and ASSD was 1.07 ± 0.63 mm. ED was 5.0 ± 6.1 mm. A good agreement was found between all DL‐derived and reference aortic indices (r &gt;0.95, mean bias &lt;7%). Our segmentation and landmark detection performances were within the inter‐observer variability except the sinotubular junction landmark (CI = 0.96;1.04). Data Conclusion A DL‐based aortic segmentation and anatomical landmark detection approach was developed and applied to 3D MRI data for achieve aortic morphology evaluation. 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Automatic solutions would help enhance their quality and reproducibility. Purpose To design a deep learning (DL)‐based automated approach for aortic landmarks and lumen detection derived from three‐dimensional (3D) MRI. Study Type Retrospective. Population Three hundred ninety‐one individuals (female: 47%, age = 51.9 ± 18.4) from three sites, including healthy subjects and patients (hypertension, aortic dilation, Turner syndrome), randomly divided into training/validation/test datasets (N = 236/77/78). Twenty‐five subjects were randomly selected and analyzed by three operators with different levels of expertise. Field Strength/Sequence 1.5‐T and 3‐T, 3D spoiled gradient‐recalled or steady‐state free precession sequences. Assessment Reinforcement learning and a two‐stage network trained using reference landmarks and segmentation from an existing semi‐automatic software were used for aortic landmark detection and segmentation from sinotubular junction to coeliac trunk. Aortic segments were defined using the detected landmarks while the aortic centerline was extracted from the segmentation and morphological indices (length, aortic diameter, and volume) were computed for both the reference and the proposed segmentations. Statistical Tests Segmentation: Dice similarity coefficient (DSC), Hausdorff distance (HD), average symmetrical surface distance (ASSD); landmark detection: Euclidian distance (ED); model robustness: Spearman correlation, Bland–Altman analysis, Kruskal–Wallis test for comparisons between reference and DL‐derived aortic indices; inter‐observer study: Williams index (WI). A WI 95% confidence interval (CI) lower bound &gt;1 indicates that the method is within the inter‐observer variability. A P‐value &lt;0.05 was considered statistically significant. Results DSC was 0.90 ± 0.05, HD was 12.11 ± 7.79 mm, and ASSD was 1.07 ± 0.63 mm. ED was 5.0 ± 6.1 mm. A good agreement was found between all DL‐derived and reference aortic indices (r &gt;0.95, mean bias &lt;7%). Our segmentation and landmark detection performances were within the inter‐observer variability except the sinotubular junction landmark (CI = 0.96;1.04). Data Conclusion A DL‐based aortic segmentation and anatomical landmark detection approach was developed and applied to 3D MRI data for achieve aortic morphology evaluation. Evidence Level 3 Technical Efficacy Stage 2</description><subject>3D cardiac MRI</subject><subject>Adult</subject><subject>Aged</subject><subject>Aorta</subject><subject>Aorta - diagnostic imaging</subject><subject>Aortic Diseases - diagnostic imaging</subject><subject>Artificial Intelligence</subject><subject>Computer Science</subject><subject>Confidence intervals</subject><subject>Deep Learning</subject><subject>Dimensional analysis</subject><subject>Engineering Sciences</subject><subject>Evaluation</subject><subject>Female</subject><subject>Field strength</subject><subject>Humans</subject><subject>Hypertension</subject><subject>Hypertension - diagnostic imaging</subject><subject>Image Interpretation, Computer-Assisted - methods</subject><subject>Image processing</subject><subject>Image Processing, Computer-Assisted - methods</subject><subject>Image segmentation</subject><subject>Imaging, Three-Dimensional - methods</subject><subject>Lower bounds</subject><subject>Magnetic resonance imaging</subject><subject>Magnetic Resonance Imaging - methods</subject><subject>Male</subject><subject>Medical Imaging</subject><subject>Metric space</subject><subject>Middle Aged</subject><subject>Morphology</subject><subject>Operators</subject><subject>Population studies</subject><subject>Reproducibility of Results</subject><subject>Retrospective Studies</subject><subject>Segmentation</subject><subject>Signal and Image processing</subject><subject>Statistical analysis</subject><subject>Statistical tests</subject><subject>Turner Syndrome - diagnostic imaging</subject><subject>Turner's syndrome</subject><issn>1053-1807</issn><issn>1522-2586</issn><issn>1522-2586</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kctOAyEUhonReKlufAAziRs1GeUyMLCsd02NxuiaUAYszcxQodV05yP4jD6J1FEXLlxByHe-cP4fgG0EDxGE-GjcBHeIBSZsCawjinGOKWfL6Q4pyRGH5RrYiHEMIRSioKtgjXCMGC3YOrg7NWaSDYwKrWufPt7ej1U0VdZvVT2PLmbeZn0fpk5nNz5MRr72T_PsPPgmexgFY9LAqWtMG51PE9nN_dUmWLGqjmbr--yBx_Ozh5PLfHB7cXXSH-SacMZyLbgohxW0AunKKl1CS0skuKWMasa5hoJxU1SIKW6hphQPS0itssKiIatK0gP7nXekajkJrlFhLr1y8rI_kIs3WBBBylK8oMTudewk-OeZiVPZuKhNXavW-FmUKTsBCSEprh7Y_YOO_Syk3aIkCHNEC04XwoOO0sHHGIz9_QGCctGJXHQivzpJ8M63cjZsTPWL_pSQANQBr642839U8joF3Ek_AZEIllE</recordid><startdate>202410</startdate><enddate>202410</enddate><creator>Guo, Jia</creator><creator>Bouaou, Kevin</creator><creator>Houriez‐‐Gombaud‐Saintonge, Sophia</creator><creator>Gueda, Moussa</creator><creator>Gencer, Umit</creator><creator>Nguyen, Vincent</creator><creator>Charpentier, Etienne</creator><creator>Soulat, Gilles</creator><creator>Redheuil, Alban</creator><creator>Mousseaux, Elie</creator><creator>Kachenoura, Nadjia</creator><creator>Dietenbeck, Thomas</creator><general>John Wiley &amp; Sons, Inc</general><general>Wiley Subscription Services, Inc</general><general>Wiley-Blackwell</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7TK</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>P64</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope><orcidid>https://orcid.org/0009-0005-0870-9844</orcidid><orcidid>https://orcid.org/0000-0003-4165-6113</orcidid><orcidid>https://orcid.org/0000-0001-5643-0497</orcidid><orcidid>https://orcid.org/0000-0002-8076-1445</orcidid><orcidid>https://orcid.org/0000-0002-9893-9694</orcidid><orcidid>https://orcid.org/0000-0002-1002-9902</orcidid></search><sort><creationdate>202410</creationdate><title>Deep Learning‐Based Analysis of Aortic Morphology From Three‐Dimensional MRI</title><author>Guo, Jia ; Bouaou, Kevin ; Houriez‐‐Gombaud‐Saintonge, Sophia ; Gueda, Moussa ; Gencer, Umit ; Nguyen, Vincent ; 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Automatic solutions would help enhance their quality and reproducibility. Purpose To design a deep learning (DL)‐based automated approach for aortic landmarks and lumen detection derived from three‐dimensional (3D) MRI. Study Type Retrospective. Population Three hundred ninety‐one individuals (female: 47%, age = 51.9 ± 18.4) from three sites, including healthy subjects and patients (hypertension, aortic dilation, Turner syndrome), randomly divided into training/validation/test datasets (N = 236/77/78). Twenty‐five subjects were randomly selected and analyzed by three operators with different levels of expertise. Field Strength/Sequence 1.5‐T and 3‐T, 3D spoiled gradient‐recalled or steady‐state free precession sequences. Assessment Reinforcement learning and a two‐stage network trained using reference landmarks and segmentation from an existing semi‐automatic software were used for aortic landmark detection and segmentation from sinotubular junction to coeliac trunk. Aortic segments were defined using the detected landmarks while the aortic centerline was extracted from the segmentation and morphological indices (length, aortic diameter, and volume) were computed for both the reference and the proposed segmentations. Statistical Tests Segmentation: Dice similarity coefficient (DSC), Hausdorff distance (HD), average symmetrical surface distance (ASSD); landmark detection: Euclidian distance (ED); model robustness: Spearman correlation, Bland–Altman analysis, Kruskal–Wallis test for comparisons between reference and DL‐derived aortic indices; inter‐observer study: Williams index (WI). A WI 95% confidence interval (CI) lower bound &gt;1 indicates that the method is within the inter‐observer variability. A P‐value &lt;0.05 was considered statistically significant. Results DSC was 0.90 ± 0.05, HD was 12.11 ± 7.79 mm, and ASSD was 1.07 ± 0.63 mm. ED was 5.0 ± 6.1 mm. A good agreement was found between all DL‐derived and reference aortic indices (r &gt;0.95, mean bias &lt;7%). Our segmentation and landmark detection performances were within the inter‐observer variability except the sinotubular junction landmark (CI = 0.96;1.04). Data Conclusion A DL‐based aortic segmentation and anatomical landmark detection approach was developed and applied to 3D MRI data for achieve aortic morphology evaluation. Evidence Level 3 Technical Efficacy Stage 2</abstract><cop>Hoboken, USA</cop><pub>John Wiley &amp; Sons, Inc</pub><pmid>38216546</pmid><doi>10.1002/jmri.29236</doi><tpages>12</tpages><orcidid>https://orcid.org/0009-0005-0870-9844</orcidid><orcidid>https://orcid.org/0000-0003-4165-6113</orcidid><orcidid>https://orcid.org/0000-0001-5643-0497</orcidid><orcidid>https://orcid.org/0000-0002-8076-1445</orcidid><orcidid>https://orcid.org/0000-0002-9893-9694</orcidid><orcidid>https://orcid.org/0000-0002-1002-9902</orcidid><oa>free_for_read</oa></addata></record>
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1522-2586
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source MEDLINE; Wiley Journals
subjects 3D cardiac MRI
Adult
Aged
Aorta
Aorta - diagnostic imaging
Aortic Diseases - diagnostic imaging
Artificial Intelligence
Computer Science
Confidence intervals
Deep Learning
Dimensional analysis
Engineering Sciences
Evaluation
Female
Field strength
Humans
Hypertension
Hypertension - diagnostic imaging
Image Interpretation, Computer-Assisted - methods
Image processing
Image Processing, Computer-Assisted - methods
Image segmentation
Imaging, Three-Dimensional - methods
Lower bounds
Magnetic resonance imaging
Magnetic Resonance Imaging - methods
Male
Medical Imaging
Metric space
Middle Aged
Morphology
Operators
Population studies
Reproducibility of Results
Retrospective Studies
Segmentation
Signal and Image processing
Statistical analysis
Statistical tests
Turner Syndrome - diagnostic imaging
Turner's syndrome
title Deep Learning‐Based Analysis of Aortic Morphology From Three‐Dimensional MRI
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