Pan-Arctic plankton community structure and its global connectivity

The Arctic Ocean (AO) is being rapidly transformed by global warming, but its biodiversity remains understudied for many planktonic organisms, in particular for unicellular eukaryotes that play pivotal roles in marine food webs and biogeochemical cycles. The aim of this study was to characterize the...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Elementa (Washington, D.C.) D.C.), 2023-04, Vol.11 (1)
Hauptverfasser: Ibarbalz, Federico M., Henry, Nicolas, Mahé, Frédéric, Ardyna, Mathieu, Zingone, Adriana, Scalco, Eleonora, Lovejoy, Connie, Lombard, Fabien, Jaillon, Olivier, Iudicone, Daniele, Malviya, Shruti, Sullivan, Matthew B., Chaffron, Samuel, Karsenti, Eric, Babin, Marcel, Boss, Emmanuel, Wincker, Patrick, Zinger, Lucie, de Vargas, Colomban, Bowler, Chris, Karp-Boss, Lee
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page
container_issue 1
container_start_page
container_title Elementa (Washington, D.C.)
container_volume 11
creator Ibarbalz, Federico M.
Henry, Nicolas
Mahé, Frédéric
Ardyna, Mathieu
Zingone, Adriana
Scalco, Eleonora
Lovejoy, Connie
Lombard, Fabien
Jaillon, Olivier
Iudicone, Daniele
Malviya, Shruti
Sullivan, Matthew B.
Chaffron, Samuel
Karsenti, Eric
Babin, Marcel
Boss, Emmanuel
Wincker, Patrick
Zinger, Lucie
de Vargas, Colomban
Bowler, Chris
Karp-Boss, Lee
description The Arctic Ocean (AO) is being rapidly transformed by global warming, but its biodiversity remains understudied for many planktonic organisms, in particular for unicellular eukaryotes that play pivotal roles in marine food webs and biogeochemical cycles. The aim of this study was to characterize the biogeographic ranges of species that comprise the contemporary pool of unicellular eukaryotes in the AO as a first step toward understanding mechanisms that structure these communities and identifying potential target species for monitoring. Leveraging the Tara Oceans DNA metabarcoding data, we mapped the global distributions of operational taxonomic units (OTUs) found on Arctic shelves into five biogeographic categories, identified biogeographic indicators, and inferred the degree to which AO communities of unicellular eukaryotes share members with assemblages from lower latitudes. Arctic/Polar indicator OTUs, as well as some globally ubiquitous OTUs, dominated the detection and abundance of DNA reads in the Arctic samples. OTUs detected only in Arctic samples (Arctic-exclusives) showed restricted distribution with relatively low abundances, accounting for 10–16% of the total Arctic OTU pool. OTUs with high abundances in tropical and/or temperate latitudes (non-Polar indicators) were also found in the AO but mainly at its periphery. We observed a large change in community taxonomic composition across the Atlantic-Arctic continuum, supporting the idea that advection and environmental filtering are important processes that shape plankton assemblages in the AO. Altogether, this study highlights the connectivity between the AO and other oceans, and provides a framework for monitoring and assessing future changes in this vulnerable ecosystem.
doi_str_mv 10.1525/elementa.2022.00060
format Article
fullrecord <record><control><sourceid>hal_cross</sourceid><recordid>TN_cdi_hal_primary_oai_HAL_hal_04267640v1</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>oai_HAL_hal_04267640v1</sourcerecordid><originalsourceid>FETCH-LOGICAL-c328t-c19fb67143f5b36b4e73212b0427c2ea9dd7c4ead521a957435a03ced150b8183</originalsourceid><addsrcrecordid>eNpNkDFPwzAQhS0EElXpL2DJypBwPttxO1YVUKRKMMBsXRwHAolT2W6l_ntSCojpnk7fe8PH2DWHgitUt65zvfOJCgTEAgBKOGMTFKhyDlie_8uXbBbjx4hw0CgRJ2z1TD5fBptam2078p9p8Jkd-n7n23TIYgo7m3bBZeTrrE0xe-uGiroR8d6Nrf1IXbGLhrroZj93yl7v715W63zz9PC4Wm5yK3CecssXTVVqLkWjKlFW0mmBHCuQqC06WtS1ttJRrZDTQmkpFIGwruYKqjmfiym7Oe2-U2e2oe0pHMxArVkvN-b4G5dKXUrY85EVJ9aGIcbgmr8CB3PUZn61maM2861NfAHmB2IC</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Pan-Arctic plankton community structure and its global connectivity</title><source>EZB-FREE-00999 freely available EZB journals</source><source>Alma/SFX Local Collection</source><creator>Ibarbalz, Federico M. ; Henry, Nicolas ; Mahé, Frédéric ; Ardyna, Mathieu ; Zingone, Adriana ; Scalco, Eleonora ; Lovejoy, Connie ; Lombard, Fabien ; Jaillon, Olivier ; Iudicone, Daniele ; Malviya, Shruti ; Sullivan, Matthew B. ; Chaffron, Samuel ; Karsenti, Eric ; Babin, Marcel ; Boss, Emmanuel ; Wincker, Patrick ; Zinger, Lucie ; de Vargas, Colomban ; Bowler, Chris ; Karp-Boss, Lee</creator><creatorcontrib>Ibarbalz, Federico M. ; Henry, Nicolas ; Mahé, Frédéric ; Ardyna, Mathieu ; Zingone, Adriana ; Scalco, Eleonora ; Lovejoy, Connie ; Lombard, Fabien ; Jaillon, Olivier ; Iudicone, Daniele ; Malviya, Shruti ; Sullivan, Matthew B. ; Chaffron, Samuel ; Karsenti, Eric ; Babin, Marcel ; Boss, Emmanuel ; Wincker, Patrick ; Zinger, Lucie ; de Vargas, Colomban ; Bowler, Chris ; Karp-Boss, Lee ; Tara Oceans Coordinators</creatorcontrib><description>The Arctic Ocean (AO) is being rapidly transformed by global warming, but its biodiversity remains understudied for many planktonic organisms, in particular for unicellular eukaryotes that play pivotal roles in marine food webs and biogeochemical cycles. The aim of this study was to characterize the biogeographic ranges of species that comprise the contemporary pool of unicellular eukaryotes in the AO as a first step toward understanding mechanisms that structure these communities and identifying potential target species for monitoring. Leveraging the Tara Oceans DNA metabarcoding data, we mapped the global distributions of operational taxonomic units (OTUs) found on Arctic shelves into five biogeographic categories, identified biogeographic indicators, and inferred the degree to which AO communities of unicellular eukaryotes share members with assemblages from lower latitudes. Arctic/Polar indicator OTUs, as well as some globally ubiquitous OTUs, dominated the detection and abundance of DNA reads in the Arctic samples. OTUs detected only in Arctic samples (Arctic-exclusives) showed restricted distribution with relatively low abundances, accounting for 10–16% of the total Arctic OTU pool. OTUs with high abundances in tropical and/or temperate latitudes (non-Polar indicators) were also found in the AO but mainly at its periphery. We observed a large change in community taxonomic composition across the Atlantic-Arctic continuum, supporting the idea that advection and environmental filtering are important processes that shape plankton assemblages in the AO. Altogether, this study highlights the connectivity between the AO and other oceans, and provides a framework for monitoring and assessing future changes in this vulnerable ecosystem.</description><identifier>ISSN: 2325-1026</identifier><identifier>EISSN: 2325-1026</identifier><identifier>DOI: 10.1525/elementa.2022.00060</identifier><language>eng</language><publisher>University of California Press</publisher><subject>Biodiversity and Ecology ; Earth Sciences ; Environmental Sciences ; Life Sciences ; Microbiology and Parasitology ; Oceanography ; Sciences of the Universe</subject><ispartof>Elementa (Washington, D.C.), 2023-04, Vol.11 (1)</ispartof><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c328t-c19fb67143f5b36b4e73212b0427c2ea9dd7c4ead521a957435a03ced150b8183</citedby><cites>FETCH-LOGICAL-c328t-c19fb67143f5b36b4e73212b0427c2ea9dd7c4ead521a957435a03ced150b8183</cites><orcidid>0000-0002-2808-0984 ; 0000-0002-4703-6655 ; 0000-0002-6476-6019 ; 0000-0003-3835-6187 ; 0000-0001-5946-6532 ; 0000-0001-5903-617X ; 0000-0001-7562-3454 ; 0000-0002-7237-9596</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,315,781,785,886,27929,27930</link.rule.ids><backlink>$$Uhttps://hal.science/hal-04267640$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Ibarbalz, Federico M.</creatorcontrib><creatorcontrib>Henry, Nicolas</creatorcontrib><creatorcontrib>Mahé, Frédéric</creatorcontrib><creatorcontrib>Ardyna, Mathieu</creatorcontrib><creatorcontrib>Zingone, Adriana</creatorcontrib><creatorcontrib>Scalco, Eleonora</creatorcontrib><creatorcontrib>Lovejoy, Connie</creatorcontrib><creatorcontrib>Lombard, Fabien</creatorcontrib><creatorcontrib>Jaillon, Olivier</creatorcontrib><creatorcontrib>Iudicone, Daniele</creatorcontrib><creatorcontrib>Malviya, Shruti</creatorcontrib><creatorcontrib>Sullivan, Matthew B.</creatorcontrib><creatorcontrib>Chaffron, Samuel</creatorcontrib><creatorcontrib>Karsenti, Eric</creatorcontrib><creatorcontrib>Babin, Marcel</creatorcontrib><creatorcontrib>Boss, Emmanuel</creatorcontrib><creatorcontrib>Wincker, Patrick</creatorcontrib><creatorcontrib>Zinger, Lucie</creatorcontrib><creatorcontrib>de Vargas, Colomban</creatorcontrib><creatorcontrib>Bowler, Chris</creatorcontrib><creatorcontrib>Karp-Boss, Lee</creatorcontrib><creatorcontrib>Tara Oceans Coordinators</creatorcontrib><title>Pan-Arctic plankton community structure and its global connectivity</title><title>Elementa (Washington, D.C.)</title><description>The Arctic Ocean (AO) is being rapidly transformed by global warming, but its biodiversity remains understudied for many planktonic organisms, in particular for unicellular eukaryotes that play pivotal roles in marine food webs and biogeochemical cycles. The aim of this study was to characterize the biogeographic ranges of species that comprise the contemporary pool of unicellular eukaryotes in the AO as a first step toward understanding mechanisms that structure these communities and identifying potential target species for monitoring. Leveraging the Tara Oceans DNA metabarcoding data, we mapped the global distributions of operational taxonomic units (OTUs) found on Arctic shelves into five biogeographic categories, identified biogeographic indicators, and inferred the degree to which AO communities of unicellular eukaryotes share members with assemblages from lower latitudes. Arctic/Polar indicator OTUs, as well as some globally ubiquitous OTUs, dominated the detection and abundance of DNA reads in the Arctic samples. OTUs detected only in Arctic samples (Arctic-exclusives) showed restricted distribution with relatively low abundances, accounting for 10–16% of the total Arctic OTU pool. OTUs with high abundances in tropical and/or temperate latitudes (non-Polar indicators) were also found in the AO but mainly at its periphery. We observed a large change in community taxonomic composition across the Atlantic-Arctic continuum, supporting the idea that advection and environmental filtering are important processes that shape plankton assemblages in the AO. Altogether, this study highlights the connectivity between the AO and other oceans, and provides a framework for monitoring and assessing future changes in this vulnerable ecosystem.</description><subject>Biodiversity and Ecology</subject><subject>Earth Sciences</subject><subject>Environmental Sciences</subject><subject>Life Sciences</subject><subject>Microbiology and Parasitology</subject><subject>Oceanography</subject><subject>Sciences of the Universe</subject><issn>2325-1026</issn><issn>2325-1026</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNpNkDFPwzAQhS0EElXpL2DJypBwPttxO1YVUKRKMMBsXRwHAolT2W6l_ntSCojpnk7fe8PH2DWHgitUt65zvfOJCgTEAgBKOGMTFKhyDlie_8uXbBbjx4hw0CgRJ2z1TD5fBptam2078p9p8Jkd-n7n23TIYgo7m3bBZeTrrE0xe-uGiroR8d6Nrf1IXbGLhrroZj93yl7v715W63zz9PC4Wm5yK3CecssXTVVqLkWjKlFW0mmBHCuQqC06WtS1ttJRrZDTQmkpFIGwruYKqjmfiym7Oe2-U2e2oe0pHMxArVkvN-b4G5dKXUrY85EVJ9aGIcbgmr8CB3PUZn61maM2861NfAHmB2IC</recordid><startdate>20230406</startdate><enddate>20230406</enddate><creator>Ibarbalz, Federico M.</creator><creator>Henry, Nicolas</creator><creator>Mahé, Frédéric</creator><creator>Ardyna, Mathieu</creator><creator>Zingone, Adriana</creator><creator>Scalco, Eleonora</creator><creator>Lovejoy, Connie</creator><creator>Lombard, Fabien</creator><creator>Jaillon, Olivier</creator><creator>Iudicone, Daniele</creator><creator>Malviya, Shruti</creator><creator>Sullivan, Matthew B.</creator><creator>Chaffron, Samuel</creator><creator>Karsenti, Eric</creator><creator>Babin, Marcel</creator><creator>Boss, Emmanuel</creator><creator>Wincker, Patrick</creator><creator>Zinger, Lucie</creator><creator>de Vargas, Colomban</creator><creator>Bowler, Chris</creator><creator>Karp-Boss, Lee</creator><general>University of California Press</general><scope>AAYXX</scope><scope>CITATION</scope><scope>1XC</scope><scope>VOOES</scope><orcidid>https://orcid.org/0000-0002-2808-0984</orcidid><orcidid>https://orcid.org/0000-0002-4703-6655</orcidid><orcidid>https://orcid.org/0000-0002-6476-6019</orcidid><orcidid>https://orcid.org/0000-0003-3835-6187</orcidid><orcidid>https://orcid.org/0000-0001-5946-6532</orcidid><orcidid>https://orcid.org/0000-0001-5903-617X</orcidid><orcidid>https://orcid.org/0000-0001-7562-3454</orcidid><orcidid>https://orcid.org/0000-0002-7237-9596</orcidid></search><sort><creationdate>20230406</creationdate><title>Pan-Arctic plankton community structure and its global connectivity</title><author>Ibarbalz, Federico M. ; Henry, Nicolas ; Mahé, Frédéric ; Ardyna, Mathieu ; Zingone, Adriana ; Scalco, Eleonora ; Lovejoy, Connie ; Lombard, Fabien ; Jaillon, Olivier ; Iudicone, Daniele ; Malviya, Shruti ; Sullivan, Matthew B. ; Chaffron, Samuel ; Karsenti, Eric ; Babin, Marcel ; Boss, Emmanuel ; Wincker, Patrick ; Zinger, Lucie ; de Vargas, Colomban ; Bowler, Chris ; Karp-Boss, Lee</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c328t-c19fb67143f5b36b4e73212b0427c2ea9dd7c4ead521a957435a03ced150b8183</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Biodiversity and Ecology</topic><topic>Earth Sciences</topic><topic>Environmental Sciences</topic><topic>Life Sciences</topic><topic>Microbiology and Parasitology</topic><topic>Oceanography</topic><topic>Sciences of the Universe</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ibarbalz, Federico M.</creatorcontrib><creatorcontrib>Henry, Nicolas</creatorcontrib><creatorcontrib>Mahé, Frédéric</creatorcontrib><creatorcontrib>Ardyna, Mathieu</creatorcontrib><creatorcontrib>Zingone, Adriana</creatorcontrib><creatorcontrib>Scalco, Eleonora</creatorcontrib><creatorcontrib>Lovejoy, Connie</creatorcontrib><creatorcontrib>Lombard, Fabien</creatorcontrib><creatorcontrib>Jaillon, Olivier</creatorcontrib><creatorcontrib>Iudicone, Daniele</creatorcontrib><creatorcontrib>Malviya, Shruti</creatorcontrib><creatorcontrib>Sullivan, Matthew B.</creatorcontrib><creatorcontrib>Chaffron, Samuel</creatorcontrib><creatorcontrib>Karsenti, Eric</creatorcontrib><creatorcontrib>Babin, Marcel</creatorcontrib><creatorcontrib>Boss, Emmanuel</creatorcontrib><creatorcontrib>Wincker, Patrick</creatorcontrib><creatorcontrib>Zinger, Lucie</creatorcontrib><creatorcontrib>de Vargas, Colomban</creatorcontrib><creatorcontrib>Bowler, Chris</creatorcontrib><creatorcontrib>Karp-Boss, Lee</creatorcontrib><creatorcontrib>Tara Oceans Coordinators</creatorcontrib><collection>CrossRef</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><jtitle>Elementa (Washington, D.C.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ibarbalz, Federico M.</au><au>Henry, Nicolas</au><au>Mahé, Frédéric</au><au>Ardyna, Mathieu</au><au>Zingone, Adriana</au><au>Scalco, Eleonora</au><au>Lovejoy, Connie</au><au>Lombard, Fabien</au><au>Jaillon, Olivier</au><au>Iudicone, Daniele</au><au>Malviya, Shruti</au><au>Sullivan, Matthew B.</au><au>Chaffron, Samuel</au><au>Karsenti, Eric</au><au>Babin, Marcel</au><au>Boss, Emmanuel</au><au>Wincker, Patrick</au><au>Zinger, Lucie</au><au>de Vargas, Colomban</au><au>Bowler, Chris</au><au>Karp-Boss, Lee</au><aucorp>Tara Oceans Coordinators</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Pan-Arctic plankton community structure and its global connectivity</atitle><jtitle>Elementa (Washington, D.C.)</jtitle><date>2023-04-06</date><risdate>2023</risdate><volume>11</volume><issue>1</issue><issn>2325-1026</issn><eissn>2325-1026</eissn><abstract>The Arctic Ocean (AO) is being rapidly transformed by global warming, but its biodiversity remains understudied for many planktonic organisms, in particular for unicellular eukaryotes that play pivotal roles in marine food webs and biogeochemical cycles. The aim of this study was to characterize the biogeographic ranges of species that comprise the contemporary pool of unicellular eukaryotes in the AO as a first step toward understanding mechanisms that structure these communities and identifying potential target species for monitoring. Leveraging the Tara Oceans DNA metabarcoding data, we mapped the global distributions of operational taxonomic units (OTUs) found on Arctic shelves into five biogeographic categories, identified biogeographic indicators, and inferred the degree to which AO communities of unicellular eukaryotes share members with assemblages from lower latitudes. Arctic/Polar indicator OTUs, as well as some globally ubiquitous OTUs, dominated the detection and abundance of DNA reads in the Arctic samples. OTUs detected only in Arctic samples (Arctic-exclusives) showed restricted distribution with relatively low abundances, accounting for 10–16% of the total Arctic OTU pool. OTUs with high abundances in tropical and/or temperate latitudes (non-Polar indicators) were also found in the AO but mainly at its periphery. We observed a large change in community taxonomic composition across the Atlantic-Arctic continuum, supporting the idea that advection and environmental filtering are important processes that shape plankton assemblages in the AO. Altogether, this study highlights the connectivity between the AO and other oceans, and provides a framework for monitoring and assessing future changes in this vulnerable ecosystem.</abstract><pub>University of California Press</pub><doi>10.1525/elementa.2022.00060</doi><orcidid>https://orcid.org/0000-0002-2808-0984</orcidid><orcidid>https://orcid.org/0000-0002-4703-6655</orcidid><orcidid>https://orcid.org/0000-0002-6476-6019</orcidid><orcidid>https://orcid.org/0000-0003-3835-6187</orcidid><orcidid>https://orcid.org/0000-0001-5946-6532</orcidid><orcidid>https://orcid.org/0000-0001-5903-617X</orcidid><orcidid>https://orcid.org/0000-0001-7562-3454</orcidid><orcidid>https://orcid.org/0000-0002-7237-9596</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2325-1026
ispartof Elementa (Washington, D.C.), 2023-04, Vol.11 (1)
issn 2325-1026
2325-1026
language eng
recordid cdi_hal_primary_oai_HAL_hal_04267640v1
source EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection
subjects Biodiversity and Ecology
Earth Sciences
Environmental Sciences
Life Sciences
Microbiology and Parasitology
Oceanography
Sciences of the Universe
title Pan-Arctic plankton community structure and its global connectivity
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-11T08%3A45%3A49IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-hal_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Pan-Arctic%20plankton%20community%20structure%20and%20its%20global%20connectivity&rft.jtitle=Elementa%20(Washington,%20D.C.)&rft.au=Ibarbalz,%20Federico%20M.&rft.aucorp=Tara%20Oceans%20Coordinators&rft.date=2023-04-06&rft.volume=11&rft.issue=1&rft.issn=2325-1026&rft.eissn=2325-1026&rft_id=info:doi/10.1525/elementa.2022.00060&rft_dat=%3Chal_cross%3Eoai_HAL_hal_04267640v1%3C/hal_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true