A taxonomical study of benthic Prorocentrum species (Prorocentrales, Dinophyceae) from Anse Dufour (Martinique Island, eastern Caribbean Sea)
About 30 benthic Prorocentrum species have been described, some of which producing okadaic acid and derivatives involved in diarrhetic shellfish poisoning. The western Caribbean has been extensively studied for benthic dinoflagellates associated with ciguatera, and fifteen Prorocentrum species were...
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description | About 30 benthic
Prorocentrum
species have been described, some of which producing okadaic acid and derivatives involved in diarrhetic shellfish poisoning. The western Caribbean has been extensively studied for benthic dinoflagellates associated with ciguatera, and fifteen
Prorocentrum
species were described from mangroves and coral reefs of Belize. In contrast, no study reported the diversity of this genus in the Eastern Caribbean, especially in the Lesser Antilles. This study adds to the biodiversity knowledge in Martinique Island by investigating one site of the Caribbean coast from 2010 to 2017. Sediment samples were collected each year in March and studied taxonomically. Identification was realized morphologically by scanning electron microscopy, while the partial large subunit (LSU) ribosomal DNA was sequenced for 42 isolated specimens (single-cells) and one strain in culture. A molecular phylogenetic analysis revealed 11 OTUs from Martinique, identified morphologically as
P. concavum
,
P.
cf.
foraminosum
,
P.
cf.
tropicale
,
P. lima
,
P. hoffmannianum
,
P.
cf.
norrisianum
,
P. glenanicum
,
P. panamense
,
P.
cf.
sculptile
,
P.
cf.
fukuyoi
, and
P. rhathymum
. Two morphospecies were also identified (
P.
cf.
maculosum
and
P.
cf.
ruetzlerianum
) but with no sequence obtained. Some species like
P.
cf.
tropicale
and
P.
cf.
norrisinamum
are sequenced for the first time. Our analysis reveals probable former misidentifications of
P.
cf.
foraminosum
and
P.
cf.
sculptile
since the sequences from Martinique form new clades and their geographical origin are closer from the type locality than any other previous studies. Further studies and sequences from the type localities are yet required to assess identifications. |
doi_str_mv | 10.1007/s12526-018-0913-6 |
format | Article |
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Prorocentrum
species have been described, some of which producing okadaic acid and derivatives involved in diarrhetic shellfish poisoning. The western Caribbean has been extensively studied for benthic dinoflagellates associated with ciguatera, and fifteen
Prorocentrum
species were described from mangroves and coral reefs of Belize. In contrast, no study reported the diversity of this genus in the Eastern Caribbean, especially in the Lesser Antilles. This study adds to the biodiversity knowledge in Martinique Island by investigating one site of the Caribbean coast from 2010 to 2017. Sediment samples were collected each year in March and studied taxonomically. Identification was realized morphologically by scanning electron microscopy, while the partial large subunit (LSU) ribosomal DNA was sequenced for 42 isolated specimens (single-cells) and one strain in culture. A molecular phylogenetic analysis revealed 11 OTUs from Martinique, identified morphologically as
P. concavum
,
P.
cf.
foraminosum
,
P.
cf.
tropicale
,
P. lima
,
P. hoffmannianum
,
P.
cf.
norrisianum
,
P. glenanicum
,
P. panamense
,
P.
cf.
sculptile
,
P.
cf.
fukuyoi
, and
P. rhathymum
. Two morphospecies were also identified (
P.
cf.
maculosum
and
P.
cf.
ruetzlerianum
) but with no sequence obtained. Some species like
P.
cf.
tropicale
and
P.
cf.
norrisinamum
are sequenced for the first time. Our analysis reveals probable former misidentifications of
P.
cf.
foraminosum
and
P.
cf.
sculptile
since the sequences from Martinique form new clades and their geographical origin are closer from the type locality than any other previous studies. Further studies and sequences from the type localities are yet required to assess identifications.</description><identifier>ISSN: 1867-1616</identifier><identifier>EISSN: 1867-1624</identifier><identifier>DOI: 10.1007/s12526-018-0913-6</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Animal Systematics/Taxonomy/Biogeography ; Benthos ; Biodiversity ; Biomedical and Life Sciences ; Cell culture ; Ciguatera ; Coral reefs ; Diarrhetic shellfish poisoning ; Dinoflagellates ; Electron microscopy ; Freshwater & Marine Ecology ; Life Sciences ; Mangroves ; Microorganisms ; Morphology ; Nucleotide sequence ; Okadaic acid ; Original Paper ; Paralytic shellfish poisoning ; Phylogenetics ; Phylogeny ; Plant Systematics/Taxonomy/Biogeography ; Prorocentrum ; Ribosomal DNA ; Scanning electron microscopy ; Sediment samplers ; Sediment samples ; Shellfish ; Taxonomy ; Toxins ; Type localities</subject><ispartof>Marine biodiversity, 2019-06, Vol.49 (3), p.1299-1319</ispartof><rights>Senckenberg Gesellschaft für Naturforschung 2018</rights><rights>Senckenberg Gesellschaft für Naturforschung 2018.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c459t-2526fd0f2ca83d9d879682f11970780c92b4493ac99e98227e3679e571b31a3</citedby><cites>FETCH-LOGICAL-c459t-2526fd0f2ca83d9d879682f11970780c92b4493ac99e98227e3679e571b31a3</cites><orcidid>0000-0001-9691-6344 ; 0000-0002-8633-3441</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s12526-018-0913-6$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2919364560?pq-origsite=primo$$EHTML$$P50$$Gproquest$$H</linktohtml><link.rule.ids>230,314,780,784,885,21388,27924,27925,33744,41488,42557,43805,51319,64385,64389,72469</link.rule.ids><backlink>$$Uhttps://hal.science/hal-04202220$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Chomérat, Nicolas</creatorcontrib><creatorcontrib>Bilien, Gwenaël</creatorcontrib><creatorcontrib>Zentz, Frédéric</creatorcontrib><title>A taxonomical study of benthic Prorocentrum species (Prorocentrales, Dinophyceae) from Anse Dufour (Martinique Island, eastern Caribbean Sea)</title><title>Marine biodiversity</title><addtitle>Mar Biodiv</addtitle><description>About 30 benthic
Prorocentrum
species have been described, some of which producing okadaic acid and derivatives involved in diarrhetic shellfish poisoning. The western Caribbean has been extensively studied for benthic dinoflagellates associated with ciguatera, and fifteen
Prorocentrum
species were described from mangroves and coral reefs of Belize. In contrast, no study reported the diversity of this genus in the Eastern Caribbean, especially in the Lesser Antilles. This study adds to the biodiversity knowledge in Martinique Island by investigating one site of the Caribbean coast from 2010 to 2017. Sediment samples were collected each year in March and studied taxonomically. Identification was realized morphologically by scanning electron microscopy, while the partial large subunit (LSU) ribosomal DNA was sequenced for 42 isolated specimens (single-cells) and one strain in culture. A molecular phylogenetic analysis revealed 11 OTUs from Martinique, identified morphologically as
P. concavum
,
P.
cf.
foraminosum
,
P.
cf.
tropicale
,
P. lima
,
P. hoffmannianum
,
P.
cf.
norrisianum
,
P. glenanicum
,
P. panamense
,
P.
cf.
sculptile
,
P.
cf.
fukuyoi
, and
P. rhathymum
. Two morphospecies were also identified (
P.
cf.
maculosum
and
P.
cf.
ruetzlerianum
) but with no sequence obtained. Some species like
P.
cf.
tropicale
and
P.
cf.
norrisinamum
are sequenced for the first time. Our analysis reveals probable former misidentifications of
P.
cf.
foraminosum
and
P.
cf.
sculptile
since the sequences from Martinique form new clades and their geographical origin are closer from the type locality than any other previous studies. Further studies and sequences from the type localities are yet required to assess identifications.</description><subject>Animal Systematics/Taxonomy/Biogeography</subject><subject>Benthos</subject><subject>Biodiversity</subject><subject>Biomedical and Life Sciences</subject><subject>Cell culture</subject><subject>Ciguatera</subject><subject>Coral reefs</subject><subject>Diarrhetic shellfish poisoning</subject><subject>Dinoflagellates</subject><subject>Electron microscopy</subject><subject>Freshwater & Marine Ecology</subject><subject>Life Sciences</subject><subject>Mangroves</subject><subject>Microorganisms</subject><subject>Morphology</subject><subject>Nucleotide sequence</subject><subject>Okadaic acid</subject><subject>Original Paper</subject><subject>Paralytic shellfish poisoning</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Plant Systematics/Taxonomy/Biogeography</subject><subject>Prorocentrum</subject><subject>Ribosomal DNA</subject><subject>Scanning electron microscopy</subject><subject>Sediment samplers</subject><subject>Sediment samples</subject><subject>Shellfish</subject><subject>Taxonomy</subject><subject>Toxins</subject><subject>Type localities</subject><issn>1867-1616</issn><issn>1867-1624</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kd9KwzAUxosoqNMH8C7gjQOrSdqlzeXY1AkTBb0Pp-mpi3TJTFpxD-E7m1HRK6_OH37fxzl8SXLG6BWjtLgOjE-4SCkrUypZloq95IiVokiZ4Pn-b8_EYXIcwhulQpRCHCVfU9LBp7NubTS0JHR9vSWuIRXabmU0efLOOx0H369J2KA2GMjF3xZaDJdkbqzbrLYaAcek8W5NpjYgmfeN6z25eADfGWveeyT3oQVbXxKE0KG3ZAbeVBWCJc8I45PkoIE24OlPHSXPtzcvs0W6fLy7n02Xqc4nskt3rzY1bbiGMqtlXRZSlLxhTBa0KKmWvMpzmYGWEmXJeYGZKCROClZlDLJRMh5cV9CqjTdr8FvlwKjFdKl2O5pzyjmnHyyy5wO78S7eHzr1Fl-y8TjFJZOZyCeCRooNlPYuBI_Nry2japePGvJRMR-1y0eJqOGDJkTWvqL_c_5f9A2NvJJP</recordid><startdate>20190601</startdate><enddate>20190601</enddate><creator>Chomérat, Nicolas</creator><creator>Bilien, Gwenaël</creator><creator>Zentz, Frédéric</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><general>Springer Verlag</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7TN</scope><scope>8FE</scope><scope>8FH</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>GNUQQ</scope><scope>H95</scope><scope>HCIFZ</scope><scope>L.G</scope><scope>LK8</scope><scope>M7P</scope><scope>PATMY</scope><scope>PCBAR</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PYCSY</scope><scope>1XC</scope><orcidid>https://orcid.org/0000-0001-9691-6344</orcidid><orcidid>https://orcid.org/0000-0002-8633-3441</orcidid></search><sort><creationdate>20190601</creationdate><title>A taxonomical study of benthic Prorocentrum species (Prorocentrales, Dinophyceae) from Anse Dufour (Martinique Island, eastern Caribbean Sea)</title><author>Chomérat, Nicolas ; Bilien, Gwenaël ; Zentz, Frédéric</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c459t-2526fd0f2ca83d9d879682f11970780c92b4493ac99e98227e3679e571b31a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Animal Systematics/Taxonomy/Biogeography</topic><topic>Benthos</topic><topic>Biodiversity</topic><topic>Biomedical and Life Sciences</topic><topic>Cell culture</topic><topic>Ciguatera</topic><topic>Coral reefs</topic><topic>Diarrhetic shellfish poisoning</topic><topic>Dinoflagellates</topic><topic>Electron microscopy</topic><topic>Freshwater & Marine Ecology</topic><topic>Life Sciences</topic><topic>Mangroves</topic><topic>Microorganisms</topic><topic>Morphology</topic><topic>Nucleotide sequence</topic><topic>Okadaic acid</topic><topic>Original Paper</topic><topic>Paralytic shellfish poisoning</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Plant Systematics/Taxonomy/Biogeography</topic><topic>Prorocentrum</topic><topic>Ribosomal DNA</topic><topic>Scanning electron microscopy</topic><topic>Sediment samplers</topic><topic>Sediment samples</topic><topic>Shellfish</topic><topic>Taxonomy</topic><topic>Toxins</topic><topic>Type localities</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chomérat, Nicolas</creatorcontrib><creatorcontrib>Bilien, Gwenaël</creatorcontrib><creatorcontrib>Zentz, Frédéric</creatorcontrib><collection>CrossRef</collection><collection>Oceanic Abstracts</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Earth, Atmospheric & Aquatic Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>ProQuest Central Student</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>SciTech Premium Collection</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>Environmental Science Database</collection><collection>Earth, Atmospheric & Aquatic Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Environmental Science Collection</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Marine biodiversity</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chomérat, Nicolas</au><au>Bilien, Gwenaël</au><au>Zentz, Frédéric</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A taxonomical study of benthic Prorocentrum species (Prorocentrales, Dinophyceae) from Anse Dufour (Martinique Island, eastern Caribbean Sea)</atitle><jtitle>Marine biodiversity</jtitle><stitle>Mar Biodiv</stitle><date>2019-06-01</date><risdate>2019</risdate><volume>49</volume><issue>3</issue><spage>1299</spage><epage>1319</epage><pages>1299-1319</pages><issn>1867-1616</issn><eissn>1867-1624</eissn><abstract>About 30 benthic
Prorocentrum
species have been described, some of which producing okadaic acid and derivatives involved in diarrhetic shellfish poisoning. The western Caribbean has been extensively studied for benthic dinoflagellates associated with ciguatera, and fifteen
Prorocentrum
species were described from mangroves and coral reefs of Belize. In contrast, no study reported the diversity of this genus in the Eastern Caribbean, especially in the Lesser Antilles. This study adds to the biodiversity knowledge in Martinique Island by investigating one site of the Caribbean coast from 2010 to 2017. Sediment samples were collected each year in March and studied taxonomically. Identification was realized morphologically by scanning electron microscopy, while the partial large subunit (LSU) ribosomal DNA was sequenced for 42 isolated specimens (single-cells) and one strain in culture. A molecular phylogenetic analysis revealed 11 OTUs from Martinique, identified morphologically as
P. concavum
,
P.
cf.
foraminosum
,
P.
cf.
tropicale
,
P. lima
,
P. hoffmannianum
,
P.
cf.
norrisianum
,
P. glenanicum
,
P. panamense
,
P.
cf.
sculptile
,
P.
cf.
fukuyoi
, and
P. rhathymum
. Two morphospecies were also identified (
P.
cf.
maculosum
and
P.
cf.
ruetzlerianum
) but with no sequence obtained. Some species like
P.
cf.
tropicale
and
P.
cf.
norrisinamum
are sequenced for the first time. Our analysis reveals probable former misidentifications of
P.
cf.
foraminosum
and
P.
cf.
sculptile
since the sequences from Martinique form new clades and their geographical origin are closer from the type locality than any other previous studies. Further studies and sequences from the type localities are yet required to assess identifications.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1007/s12526-018-0913-6</doi><tpages>21</tpages><orcidid>https://orcid.org/0000-0001-9691-6344</orcidid><orcidid>https://orcid.org/0000-0002-8633-3441</orcidid><oa>free_for_read</oa></addata></record> |
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ispartof | Marine biodiversity, 2019-06, Vol.49 (3), p.1299-1319 |
issn | 1867-1616 1867-1624 |
language | eng |
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source | SpringerNature Journals; ProQuest Central UK/Ireland; ProQuest Central |
subjects | Animal Systematics/Taxonomy/Biogeography Benthos Biodiversity Biomedical and Life Sciences Cell culture Ciguatera Coral reefs Diarrhetic shellfish poisoning Dinoflagellates Electron microscopy Freshwater & Marine Ecology Life Sciences Mangroves Microorganisms Morphology Nucleotide sequence Okadaic acid Original Paper Paralytic shellfish poisoning Phylogenetics Phylogeny Plant Systematics/Taxonomy/Biogeography Prorocentrum Ribosomal DNA Scanning electron microscopy Sediment samplers Sediment samples Shellfish Taxonomy Toxins Type localities |
title | A taxonomical study of benthic Prorocentrum species (Prorocentrales, Dinophyceae) from Anse Dufour (Martinique Island, eastern Caribbean Sea) |
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