Weizmannia faecalis sp. nov., isolated from a human stool sample
Using the culturomics approach, the previously unknown strain Marseille-P8953 T , was isolated and classified within the Weizmannia genus. Strain Marseille-P8953 T was isolated from the faeces of a healthy subject and consisted of Gram-stain positive, spore-forming, motile rod-shaped cells. A 99.2%...
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| Veröffentlicht in: | Archives of microbiology 2022-10, Vol.204 (10), p.612-612, Article 612 |
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| creator | Kieu, Hoang Thong Pham, Thi Phuong Thao Lo, Cheikh Ibrahima Alibar, Stéphane Bréchard, Ludivine Armstrong, Nicholas Decloquement, Philippe Diallo, Aldiouma Sokhna, Cheikh Million, Matthieu Lagier, Jean-Christophe Raoult, Didier Tidjani Alou, Maryam |
| description | Using the culturomics approach, the previously unknown strain Marseille-P8953
T
, was isolated and classified within the
Weizmannia
genus. Strain Marseille-P8953
T
was isolated from the faeces of a healthy subject and consisted of Gram-stain positive, spore-forming, motile rod-shaped cells. A 99.2% similarity was observed between the 16S rRNA gene of strain Marseille-P8953
T
(accession number LR735539) and that of
Weizmannia coagulans
strain NBRC 12583
T
(accession number KX261624), its closest phylogenetic relative, while the genome of strain Marseille-P8953
T
(3.5 Mpb long, 46.5% GC content) shared the average nucleotide identity by Orthology and digital DNA-DNA Hybridisation values of 95 and 60.4%, respectively. Given the phylogenetic classification and phenotypic characteristics of strain Marseille-P8953
T
, we propose the creation of a new species within the
Weizmannia
genus named
Weizmannia faecalis
(= CSUR P8953
T
= CECT 9904
T
). |
| doi_str_mv | 10.1007/s00203-022-03229-6 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_hal_p</sourceid><recordid>TN_cdi_hal_primary_oai_HAL_hal_03941949v1</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2712844959</sourcerecordid><originalsourceid>FETCH-LOGICAL-c386t-104773986e9b727b18a6c73216c2b7e9de93d6d9aec7b872d5fd7bb67e4a31043</originalsourceid><addsrcrecordid>eNp9kc1LxDAQxYMo7rr6D3gKeFGw6yRT83FzEb9gwYuit5C2qdulbdamu6B_vdGKggdPwwy_95jHI-SQwZQByLMAwAET4DwB5FwnYouMWYpxlfx5m4wBgSdKI47IXghLAMaVUrtkhAKUZBzH5OLJVe-NbdvK0tK63NZVoGE1pa3fTE9pFXxte1fQsvMNtXSxjiwNvfc1DbZZ1W6f7JS2Du7ge07I4_XVw-VtMr-_ubuczZMclegTBqmUqJVwOpNcZkxZkUvkTOQ8k04XTmMhCh1fkJmSvDgvC5llQrrUYhTjhJwMvgtbm1VXNbZ7M95W5nY2N583QJ0yneoNi-zxwK46_7p2oTdNFXJX17Z1fh0Mj9lVmupzHdGjP-jSr7s2JvmiMNUMIVJ8oPLOh9C58ucDBuazCzN0YWIX5qsLI6IIB1GIcPviul_rf1Qfz-KHKw</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2712349130</pqid></control><display><type>article</type><title>Weizmannia faecalis sp. nov., isolated from a human stool sample</title><source>SpringerLink Journals</source><creator>Kieu, Hoang Thong ; Pham, Thi Phuong Thao ; Lo, Cheikh Ibrahima ; Alibar, Stéphane ; Bréchard, Ludivine ; Armstrong, Nicholas ; Decloquement, Philippe ; Diallo, Aldiouma ; Sokhna, Cheikh ; Million, Matthieu ; Lagier, Jean-Christophe ; Raoult, Didier ; Tidjani Alou, Maryam</creator><creatorcontrib>Kieu, Hoang Thong ; Pham, Thi Phuong Thao ; Lo, Cheikh Ibrahima ; Alibar, Stéphane ; Bréchard, Ludivine ; Armstrong, Nicholas ; Decloquement, Philippe ; Diallo, Aldiouma ; Sokhna, Cheikh ; Million, Matthieu ; Lagier, Jean-Christophe ; Raoult, Didier ; Tidjani Alou, Maryam</creatorcontrib><description>Using the culturomics approach, the previously unknown strain Marseille-P8953
T
, was isolated and classified within the
Weizmannia
genus. Strain Marseille-P8953
T
was isolated from the faeces of a healthy subject and consisted of Gram-stain positive, spore-forming, motile rod-shaped cells. A 99.2% similarity was observed between the 16S rRNA gene of strain Marseille-P8953
T
(accession number LR735539) and that of
Weizmannia coagulans
strain NBRC 12583
T
(accession number KX261624), its closest phylogenetic relative, while the genome of strain Marseille-P8953
T
(3.5 Mpb long, 46.5% GC content) shared the average nucleotide identity by Orthology and digital DNA-DNA Hybridisation values of 95 and 60.4%, respectively. Given the phylogenetic classification and phenotypic characteristics of strain Marseille-P8953
T
, we propose the creation of a new species within the
Weizmannia
genus named
Weizmannia faecalis
(= CSUR P8953
T
= CECT 9904
T
).</description><identifier>ISSN: 0302-8933</identifier><identifier>EISSN: 1432-072X</identifier><identifier>DOI: 10.1007/s00203-022-03229-6</identifier><identifier>PMID: 36087123</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Archives & records ; Bacillaceae ; Base Composition ; Biochemistry ; Biomedical and Life Sciences ; Biotechnology ; Cell Biology ; Chromatography ; Deoxyribonucleic acid ; DNA ; DNA, Bacterial ; Ecology ; Fatty acids ; Feces ; Genomes ; Human wastes ; Humans ; Hybridization ; Infections ; Life Sciences ; Mass spectrometry ; Microbial Ecology ; Microbiology ; Microbiota ; New species ; Nucleotides ; Orthology ; Phylogenetics ; Phylogeny ; RNA, Ribosomal, 16S ; rRNA 16S ; Scientific imaging ; Short Communication</subject><ispartof>Archives of microbiology, 2022-10, Vol.204 (10), p.612-612, Article 612</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2022</rights><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2022.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c386t-104773986e9b727b18a6c73216c2b7e9de93d6d9aec7b872d5fd7bb67e4a31043</citedby><cites>FETCH-LOGICAL-c386t-104773986e9b727b18a6c73216c2b7e9de93d6d9aec7b872d5fd7bb67e4a31043</cites><orcidid>0000-0002-0167-6235 ; 0000-0002-2895-5824 ; 0000-0002-0633-5974</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00203-022-03229-6$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00203-022-03229-6$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,780,784,885,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://amu.hal.science/hal-03941949$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Kieu, Hoang Thong</creatorcontrib><creatorcontrib>Pham, Thi Phuong Thao</creatorcontrib><creatorcontrib>Lo, Cheikh Ibrahima</creatorcontrib><creatorcontrib>Alibar, Stéphane</creatorcontrib><creatorcontrib>Bréchard, Ludivine</creatorcontrib><creatorcontrib>Armstrong, Nicholas</creatorcontrib><creatorcontrib>Decloquement, Philippe</creatorcontrib><creatorcontrib>Diallo, Aldiouma</creatorcontrib><creatorcontrib>Sokhna, Cheikh</creatorcontrib><creatorcontrib>Million, Matthieu</creatorcontrib><creatorcontrib>Lagier, Jean-Christophe</creatorcontrib><creatorcontrib>Raoult, Didier</creatorcontrib><creatorcontrib>Tidjani Alou, Maryam</creatorcontrib><title>Weizmannia faecalis sp. nov., isolated from a human stool sample</title><title>Archives of microbiology</title><addtitle>Arch Microbiol</addtitle><description>Using the culturomics approach, the previously unknown strain Marseille-P8953
T
, was isolated and classified within the
Weizmannia
genus. Strain Marseille-P8953
T
was isolated from the faeces of a healthy subject and consisted of Gram-stain positive, spore-forming, motile rod-shaped cells. A 99.2% similarity was observed between the 16S rRNA gene of strain Marseille-P8953
T
(accession number LR735539) and that of
Weizmannia coagulans
strain NBRC 12583
T
(accession number KX261624), its closest phylogenetic relative, while the genome of strain Marseille-P8953
T
(3.5 Mpb long, 46.5% GC content) shared the average nucleotide identity by Orthology and digital DNA-DNA Hybridisation values of 95 and 60.4%, respectively. Given the phylogenetic classification and phenotypic characteristics of strain Marseille-P8953
T
, we propose the creation of a new species within the
Weizmannia
genus named
Weizmannia faecalis
(= CSUR P8953
T
= CECT 9904
T
).</description><subject>Archives & records</subject><subject>Bacillaceae</subject><subject>Base Composition</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Cell Biology</subject><subject>Chromatography</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA, Bacterial</subject><subject>Ecology</subject><subject>Fatty acids</subject><subject>Feces</subject><subject>Genomes</subject><subject>Human wastes</subject><subject>Humans</subject><subject>Hybridization</subject><subject>Infections</subject><subject>Life Sciences</subject><subject>Mass spectrometry</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Microbiota</subject><subject>New species</subject><subject>Nucleotides</subject><subject>Orthology</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S</subject><subject>rRNA 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faecalis sp. nov., isolated from a human stool sample</title><author>Kieu, Hoang Thong ; Pham, Thi Phuong Thao ; Lo, Cheikh Ibrahima ; Alibar, Stéphane ; Bréchard, Ludivine ; Armstrong, Nicholas ; Decloquement, Philippe ; Diallo, Aldiouma ; Sokhna, Cheikh ; Million, Matthieu ; Lagier, Jean-Christophe ; Raoult, Didier ; Tidjani Alou, Maryam</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c386t-104773986e9b727b18a6c73216c2b7e9de93d6d9aec7b872d5fd7bb67e4a31043</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Archives & records</topic><topic>Bacillaceae</topic><topic>Base Composition</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Cell Biology</topic><topic>Chromatography</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA, Bacterial</topic><topic>Ecology</topic><topic>Fatty acids</topic><topic>Feces</topic><topic>Genomes</topic><topic>Human wastes</topic><topic>Humans</topic><topic>Hybridization</topic><topic>Infections</topic><topic>Life Sciences</topic><topic>Mass spectrometry</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Microbiota</topic><topic>New species</topic><topic>Nucleotides</topic><topic>Orthology</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal, 16S</topic><topic>rRNA 16S</topic><topic>Scientific imaging</topic><topic>Short Communication</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kieu, Hoang Thong</creatorcontrib><creatorcontrib>Pham, Thi Phuong Thao</creatorcontrib><creatorcontrib>Lo, Cheikh Ibrahima</creatorcontrib><creatorcontrib>Alibar, Stéphane</creatorcontrib><creatorcontrib>Bréchard, Ludivine</creatorcontrib><creatorcontrib>Armstrong, Nicholas</creatorcontrib><creatorcontrib>Decloquement, 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Thao</au><au>Lo, Cheikh Ibrahima</au><au>Alibar, Stéphane</au><au>Bréchard, Ludivine</au><au>Armstrong, Nicholas</au><au>Decloquement, Philippe</au><au>Diallo, Aldiouma</au><au>Sokhna, Cheikh</au><au>Million, Matthieu</au><au>Lagier, Jean-Christophe</au><au>Raoult, Didier</au><au>Tidjani Alou, Maryam</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Weizmannia faecalis sp. nov., isolated from a human stool sample</atitle><jtitle>Archives of microbiology</jtitle><stitle>Arch Microbiol</stitle><date>2022-10-01</date><risdate>2022</risdate><volume>204</volume><issue>10</issue><spage>612</spage><epage>612</epage><pages>612-612</pages><artnum>612</artnum><issn>0302-8933</issn><eissn>1432-072X</eissn><abstract>Using the culturomics approach, the previously unknown strain Marseille-P8953
T
, was isolated and classified within the
Weizmannia
genus. Strain Marseille-P8953
T
was isolated from the faeces of a healthy subject and consisted of Gram-stain positive, spore-forming, motile rod-shaped cells. A 99.2% similarity was observed between the 16S rRNA gene of strain Marseille-P8953
T
(accession number LR735539) and that of
Weizmannia coagulans
strain NBRC 12583
T
(accession number KX261624), its closest phylogenetic relative, while the genome of strain Marseille-P8953
T
(3.5 Mpb long, 46.5% GC content) shared the average nucleotide identity by Orthology and digital DNA-DNA Hybridisation values of 95 and 60.4%, respectively. Given the phylogenetic classification and phenotypic characteristics of strain Marseille-P8953
T
, we propose the creation of a new species within the
Weizmannia
genus named
Weizmannia faecalis
(= CSUR P8953
T
= CECT 9904
T
).</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>36087123</pmid><doi>10.1007/s00203-022-03229-6</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-0167-6235</orcidid><orcidid>https://orcid.org/0000-0002-2895-5824</orcidid><orcidid>https://orcid.org/0000-0002-0633-5974</orcidid></addata></record> |
| fulltext | fulltext |
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| ispartof | Archives of microbiology, 2022-10, Vol.204 (10), p.612-612, Article 612 |
| issn | 0302-8933 1432-072X |
| language | eng |
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| source | SpringerLink Journals |
| subjects | Archives & records Bacillaceae Base Composition Biochemistry Biomedical and Life Sciences Biotechnology Cell Biology Chromatography Deoxyribonucleic acid DNA DNA, Bacterial Ecology Fatty acids Feces Genomes Human wastes Humans Hybridization Infections Life Sciences Mass spectrometry Microbial Ecology Microbiology Microbiota New species Nucleotides Orthology Phylogenetics Phylogeny RNA, Ribosomal, 16S rRNA 16S Scientific imaging Short Communication |
| title | Weizmannia faecalis sp. nov., isolated from a human stool sample |
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