Kick–Fukui: A Fukui Function-Guided Method for Molecular Structure Prediction

Here, we introduce a hybrid method, named Kick–Fukui, to explore the potential energy surface (PES) of clusters and molecules using the Coulombic integral between the Fukui functions in the first screening of the best individuals. In the process, small stable molecules or clusters whose combination...

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Veröffentlicht in:Journal of chemical information and modeling 2021-08, Vol.61 (8), p.3955-3963
Hauptverfasser: Yañez, Osvaldo, Báez-Grez, Rodrigo, Inostroza, Diego, Pino-Rios, Ricardo, Rabanal-León, Walter A, Contreras-García, Julia, Cardenas, Carlos, Tiznado, William
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container_issue 8
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container_title Journal of chemical information and modeling
container_volume 61
creator Yañez, Osvaldo
Báez-Grez, Rodrigo
Inostroza, Diego
Pino-Rios, Ricardo
Rabanal-León, Walter A
Contreras-García, Julia
Cardenas, Carlos
Tiznado, William
description Here, we introduce a hybrid method, named Kick–Fukui, to explore the potential energy surface (PES) of clusters and molecules using the Coulombic integral between the Fukui functions in the first screening of the best individuals. In the process, small stable molecules or clusters whose combination has the stoichiometry of the explored species are used as assembly units. First, a small set of candidates has been selected from a large and stochastically generated (Kick) population according to the maximum value of the Coulombic integral between the Fukui functions of both fragments. Subsequently, these few candidates are optimized using a gradient method and density functional theory (DFT) calculations. The performance of the program has been evaluated to explore the PES of various systems, including atomic and molecular clusters. In most cases studied, the global minimum (GM) has been identified with a low computational cost. The strategy does not allow to identify the GM of some silicon clusters; however, it predicts local minima very close in energy to the GM that could be used as the initial population of evolutionary algorithms.
doi_str_mv 10.1021/acs.jcim.1c00605
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subjects Chemical Sciences
Computational Chemistry
Density functional theory
Evolutionary algorithms
Integrals
Molecular clusters
Molecular structure
or physical chemistry
Potential energy
Stoichiometry
Theoretical and
title Kick–Fukui: A Fukui Function-Guided Method for Molecular Structure Prediction
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