Effect of carbon source supply and its location on competition between inoculated and established bacterial strains in sterile soil microcosm
The aim of this work was to study how the location of a carbon source and of bacterial cells in soil can enhance the growth of a bacterial inoculum. Studies were performed using irradiated soil and two pairs of strains of Bradyrhizobium japonicum and Pseudomonas fluorescens. For each species, an ant...
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description | The aim of this work was to study how the location of a carbon source and of bacterial cells in soil can enhance the growth of a bacterial inoculum. Studies were performed using irradiated soil and two pairs of strains of Bradyrhizobium japonicum and Pseudomonas fluorescens. For each species, an antibiotic-resistant mutant was used as inoculant and introduced into a sterile soil pre-colonised with its parent strain. The inocula and a glycerol amendment were introduced together or separately into soil using porous microgranules or by spraying a suspension onto the bulk soil. Competition was assessed by plate counts of both inoculant and established populations. Both B. japonicum and P. fluorescens parent strains established at a high density level (10(9) cells g(-1) of dry soil) in the sterile soil. The effects of the amendment on the inoculant strain in soil were strongly dependent on the way the cells and the substrate were introduced into the soil. Joint introduction of cells and substrate into soil improved the growth of the inoculant strain, but the effect of the amendment was also shown to be dependent on the inoculant carrier. Location of glycerol and the inoculant strain in microgranules gave a competitive advantage to the inoculated bacterium for a part of the amendment. We suggest that diffusion of glycerol from microgranules to the soil limits the competitive advantage of such location effects. |
doi_str_mv | 10.1111/j.1574-6941.1999.tb00624.x |
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Studies were performed using irradiated soil and two pairs of strains of Bradyrhizobium japonicum and Pseudomonas fluorescens. For each species, an antibiotic-resistant mutant was used as inoculant and introduced into a sterile soil pre-colonised with its parent strain. The inocula and a glycerol amendment were introduced together or separately into soil using porous microgranules or by spraying a suspension onto the bulk soil. Competition was assessed by plate counts of both inoculant and established populations. Both B. japonicum and P. fluorescens parent strains established at a high density level (10(9) cells g(-1) of dry soil) in the sterile soil. The effects of the amendment on the inoculant strain in soil were strongly dependent on the way the cells and the substrate were introduced into the soil. Joint introduction of cells and substrate into soil improved the growth of the inoculant strain, but the effect of the amendment was also shown to be dependent on the inoculant carrier. Location of glycerol and the inoculant strain in microgranules gave a competitive advantage to the inoculated bacterium for a part of the amendment. We suggest that diffusion of glycerol from microgranules to the soil limits the competitive advantage of such location effects.</description><identifier>ISSN: 0168-6496</identifier><identifier>EISSN: 1574-6941</identifier><identifier>DOI: 10.1111/j.1574-6941.1999.tb00624.x</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Agronomy. Soil science and plant productions ; Antibiotic resistance ; Antibiotics ; Bacteria ; Bacterium ; Biochemistry and biology ; Biological and medical sciences ; Bradyrhizobium japonicum ; Carbon ; Carbon sources ; Chemical, physicochemical, biochemical and biological properties ; Competition ; ecological competition ; Ecology ; Fundamental and applied biological sciences. Psychology ; Glycerol ; Inoculant ; Inoculum ; Life Sciences ; Location ; Microbiology ; Microbiology and Parasitology ; Physics, chemistry, biochemistry and biology of agricultural and forest soils ; Pseudomonas fluorescens ; Resistant mutant ; Soil ; soil bacteria ; Soil improvement ; soil inoculation ; Soil microorganisms ; Soil porosity ; Soil science ; Soils ; Spraying ; Sterile soil ; Strains (organisms) ; Substrates</subject><ispartof>FEMS microbiology ecology, 1999-08, Vol.29 (4), p.331-339</ispartof><rights>1999 Federation of European Microbiological Societies. Published by Elsevier Science B.V. All rights reserved. 1999</rights><rights>1999 INIST-CNRS</rights><rights>1999 Federation of European Microbiological Societies. Published by Elsevier Science B.V. All rights reserved.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4071-30a176315940c8671044c56a53b6451b5f367d7bded9b0d685821b77aa9298f83</citedby><cites>FETCH-LOGICAL-c4071-30a176315940c8671044c56a53b6451b5f367d7bded9b0d685821b77aa9298f83</cites><orcidid>0000-0003-1513-8574</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1574-6941.1999.tb00624.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1574-6941.1999.tb00624.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>230,314,776,780,881,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=1906312$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.inrae.fr/hal-02697535$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Duquenne, P</creatorcontrib><creatorcontrib>Chenu, C</creatorcontrib><creatorcontrib>Richard, G</creatorcontrib><creatorcontrib>Catroux, G</creatorcontrib><title>Effect of carbon source supply and its location on competition between inoculated and established bacterial strains in sterile soil microcosm</title><title>FEMS microbiology ecology</title><description>The aim of this work was to study how the location of a carbon source and of bacterial cells in soil can enhance the growth of a bacterial inoculum. Studies were performed using irradiated soil and two pairs of strains of Bradyrhizobium japonicum and Pseudomonas fluorescens. For each species, an antibiotic-resistant mutant was used as inoculant and introduced into a sterile soil pre-colonised with its parent strain. The inocula and a glycerol amendment were introduced together or separately into soil using porous microgranules or by spraying a suspension onto the bulk soil. Competition was assessed by plate counts of both inoculant and established populations. Both B. japonicum and P. fluorescens parent strains established at a high density level (10(9) cells g(-1) of dry soil) in the sterile soil. The effects of the amendment on the inoculant strain in soil were strongly dependent on the way the cells and the substrate were introduced into the soil. Joint introduction of cells and substrate into soil improved the growth of the inoculant strain, but the effect of the amendment was also shown to be dependent on the inoculant carrier. Location of glycerol and the inoculant strain in microgranules gave a competitive advantage to the inoculated bacterium for a part of the amendment. We suggest that diffusion of glycerol from microgranules to the soil limits the competitive advantage of such location effects.</description><subject>Agronomy. Soil science and plant productions</subject><subject>Antibiotic resistance</subject><subject>Antibiotics</subject><subject>Bacteria</subject><subject>Bacterium</subject><subject>Biochemistry and biology</subject><subject>Biological and medical sciences</subject><subject>Bradyrhizobium japonicum</subject><subject>Carbon</subject><subject>Carbon sources</subject><subject>Chemical, physicochemical, biochemical and biological properties</subject><subject>Competition</subject><subject>ecological competition</subject><subject>Ecology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Glycerol</subject><subject>Inoculant</subject><subject>Inoculum</subject><subject>Life Sciences</subject><subject>Location</subject><subject>Microbiology</subject><subject>Microbiology and Parasitology</subject><subject>Physics, chemistry, biochemistry and biology of agricultural and forest soils</subject><subject>Pseudomonas fluorescens</subject><subject>Resistant mutant</subject><subject>Soil</subject><subject>soil bacteria</subject><subject>Soil improvement</subject><subject>soil inoculation</subject><subject>Soil microorganisms</subject><subject>Soil porosity</subject><subject>Soil science</subject><subject>Soils</subject><subject>Spraying</subject><subject>Sterile soil</subject><subject>Strains (organisms)</subject><subject>Substrates</subject><issn>0168-6496</issn><issn>1574-6941</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNqVUU1v1DAQjRBILIXfQAQIqYcsdhw7NgekqtpSpEUcoGdr4jjUK28c7IR2fwT_uZNmVSQEByxL9sy8efPxsuwVJWuK591uTXldFUJVdE2VUuuxIUSU1fr2UbZ6CD3OVoQKWYhKiafZs5R2hFDOKrLKfm26zpoxD11uIDahz1OYorF5mobBH3Lo29yNKffBwOgwjNeE_WBHd282dryxts9dH8zkYbTtfYpNIzTepWu0GzCjjQ58nsYIrk8Ixi-6PJYJzud7Z2IwIe2fZ0868Mm-OL4n2dXF5tv5ZbH98vHT-dm2MBWpacEI0FowylVFjBQ1JVVluADOGlFx2vCOibqtm9a2qiGtkFyWtKlrAFUq2Ul2kp0uvNfg9RDdHuJBB3D68myrZx8phao54z8pYt8u2CGGHxMOpvcuGes99DZMSdOaSeyhRuDrP4A7XGWPc-iSMSopE3Kme7-gcOSUou0e6lOiZ031Ts_C6Vk4PWuqj5rqW0x-cywByYDvIvTGpd8MiuBWSoR9WGA3uOLDfxTQF5vP2CoS8IUgTMM_0ou_9_dyyesgaPgesberryWhjJSKSaIkuwPMA8-U</recordid><startdate>199908</startdate><enddate>199908</enddate><creator>Duquenne, P</creator><creator>Chenu, C</creator><creator>Richard, G</creator><creator>Catroux, G</creator><general>Blackwell Publishing Ltd</general><general>Blackwell</general><general>Oxford University Press</general><general>Wiley-Blackwell</general><scope>FBQ</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>RC3</scope><scope>1XC</scope><orcidid>https://orcid.org/0000-0003-1513-8574</orcidid></search><sort><creationdate>199908</creationdate><title>Effect of carbon source supply and its location on competition between inoculated and established bacterial strains in sterile soil microcosm</title><author>Duquenne, P ; Chenu, C ; Richard, G ; Catroux, G</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4071-30a176315940c8671044c56a53b6451b5f367d7bded9b0d685821b77aa9298f83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>Agronomy. Soil science and plant productions</topic><topic>Antibiotic resistance</topic><topic>Antibiotics</topic><topic>Bacteria</topic><topic>Bacterium</topic><topic>Biochemistry and biology</topic><topic>Biological and medical sciences</topic><topic>Bradyrhizobium japonicum</topic><topic>Carbon</topic><topic>Carbon sources</topic><topic>Chemical, physicochemical, biochemical and biological properties</topic><topic>Competition</topic><topic>ecological competition</topic><topic>Ecology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Glycerol</topic><topic>Inoculant</topic><topic>Inoculum</topic><topic>Life Sciences</topic><topic>Location</topic><topic>Microbiology</topic><topic>Microbiology and Parasitology</topic><topic>Physics, chemistry, biochemistry and biology of agricultural and forest soils</topic><topic>Pseudomonas fluorescens</topic><topic>Resistant mutant</topic><topic>Soil</topic><topic>soil bacteria</topic><topic>Soil improvement</topic><topic>soil inoculation</topic><topic>Soil microorganisms</topic><topic>Soil porosity</topic><topic>Soil science</topic><topic>Soils</topic><topic>Spraying</topic><topic>Sterile soil</topic><topic>Strains (organisms)</topic><topic>Substrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Duquenne, P</creatorcontrib><creatorcontrib>Chenu, C</creatorcontrib><creatorcontrib>Richard, G</creatorcontrib><creatorcontrib>Catroux, G</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Ecology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>FEMS microbiology ecology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Duquenne, P</au><au>Chenu, C</au><au>Richard, G</au><au>Catroux, G</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Effect of carbon source supply and its location on competition between inoculated and established bacterial strains in sterile soil microcosm</atitle><jtitle>FEMS microbiology ecology</jtitle><date>1999-08</date><risdate>1999</risdate><volume>29</volume><issue>4</issue><spage>331</spage><epage>339</epage><pages>331-339</pages><issn>0168-6496</issn><eissn>1574-6941</eissn><abstract>The aim of this work was to study how the location of a carbon source and of bacterial cells in soil can enhance the growth of a bacterial inoculum. Studies were performed using irradiated soil and two pairs of strains of Bradyrhizobium japonicum and Pseudomonas fluorescens. For each species, an antibiotic-resistant mutant was used as inoculant and introduced into a sterile soil pre-colonised with its parent strain. The inocula and a glycerol amendment were introduced together or separately into soil using porous microgranules or by spraying a suspension onto the bulk soil. Competition was assessed by plate counts of both inoculant and established populations. Both B. japonicum and P. fluorescens parent strains established at a high density level (10(9) cells g(-1) of dry soil) in the sterile soil. The effects of the amendment on the inoculant strain in soil were strongly dependent on the way the cells and the substrate were introduced into the soil. Joint introduction of cells and substrate into soil improved the growth of the inoculant strain, but the effect of the amendment was also shown to be dependent on the inoculant carrier. Location of glycerol and the inoculant strain in microgranules gave a competitive advantage to the inoculated bacterium for a part of the amendment. We suggest that diffusion of glycerol from microgranules to the soil limits the competitive advantage of such location effects.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><doi>10.1111/j.1574-6941.1999.tb00624.x</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0003-1513-8574</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Agronomy. Soil science and plant productions Antibiotic resistance Antibiotics Bacteria Bacterium Biochemistry and biology Biological and medical sciences Bradyrhizobium japonicum Carbon Carbon sources Chemical, physicochemical, biochemical and biological properties Competition ecological competition Ecology Fundamental and applied biological sciences. Psychology Glycerol Inoculant Inoculum Life Sciences Location Microbiology Microbiology and Parasitology Physics, chemistry, biochemistry and biology of agricultural and forest soils Pseudomonas fluorescens Resistant mutant Soil soil bacteria Soil improvement soil inoculation Soil microorganisms Soil porosity Soil science Soils Spraying Sterile soil Strains (organisms) Substrates |
title | Effect of carbon source supply and its location on competition between inoculated and established bacterial strains in sterile soil microcosm |
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