Activation of the LicT Transcriptional Antiterminator Involves a Domain Swing/Lock Mechanism Provoking Massive Structural Changes
The transcriptional antiterminator protein LicT regulates the expression of Bacillus subtilis operons involved in β-glucoside metabolism. It consists of an N-terminal RNA-binding domain (co-antiterminator (CAT)) and two phosphorylatable phosphotransferase system regulation domains (PRD1 and PRD2). I...
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Veröffentlicht in: | The Journal of biological chemistry 2005-04, Vol.280 (15), p.14780-14789 |
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creator | Graille, Marc Zhou, Cong-Zhao Receveur-Bréchot, Véronique Collinet, Bruno Declerck, Nathalie van Tilbeurgh, Herman |
description | The transcriptional antiterminator protein LicT regulates the expression of Bacillus subtilis operons involved in β-glucoside metabolism. It consists of an N-terminal RNA-binding domain (co-antiterminator (CAT)) and two phosphorylatable phosphotransferase system regulation domains (PRD1 and PRD2). In the activated state, each PRD forms a dimeric unit with the phosphorylation sites totally buried at the dimer interface. Here we present the 1.95 Å resolution structure of the inactive LicT PRDs as well as the molecular solution structure of the full-length protein deduced from small angle x-ray scattering. Comparison of native (inactive) and mutant (constitutively active) PRD crystal structures shows massive tertiary and quaternary rearrangements of the entire regulatory domain. In the inactive state, a wide swing movement of PRD2 results in dimer opening and brings the phosphorylation sites to the protein surface. This movement is accompanied by additional structural rearrangements of both the PRD1-PRD1 ′ interface and the CAT-PRD1 linker. Small angle x-ray scattering experiments indicate that the amplitude of the PRD2 swing might even be wider in solution than in the crystals. Our results suggest that PRD2 is highly mobile in the native protein, whereas it is locked upon activation by phosphorylation. |
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It consists of an N-terminal RNA-binding domain (co-antiterminator (CAT)) and two phosphorylatable phosphotransferase system regulation domains (PRD1 and PRD2). In the activated state, each PRD forms a dimeric unit with the phosphorylation sites totally buried at the dimer interface. Here we present the 1.95 Å resolution structure of the inactive LicT PRDs as well as the molecular solution structure of the full-length protein deduced from small angle x-ray scattering. Comparison of native (inactive) and mutant (constitutively active) PRD crystal structures shows massive tertiary and quaternary rearrangements of the entire regulatory domain. In the inactive state, a wide swing movement of PRD2 results in dimer opening and brings the phosphorylation sites to the protein surface. This movement is accompanied by additional structural rearrangements of both the PRD1-PRD1 ′ interface and the CAT-PRD1 linker. Small angle x-ray scattering experiments indicate that the amplitude of the PRD2 swing might even be wider in solution than in the crystals. Our results suggest that PRD2 is highly mobile in the native protein, whereas it is locked upon activation by phosphorylation.</description><identifier>ISSN: 0021-9258</identifier><identifier>EISSN: 1083-351X</identifier><identifier>DOI: 10.1074/jbc.M414642200</identifier><identifier>PMID: 15699035</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Bacillus subtilis ; Bacillus subtilis - metabolism ; Bacterial Proteins - chemistry ; Bacterial Proteins - physiology ; Biochemistry ; Biochemistry, Molecular Biology ; Crystallography, X-Ray ; Dimerization ; Life Sciences ; Models, Biological ; Models, Molecular ; Mutation ; Phosphorylation ; Protein Conformation ; Protein Structure, Quaternary ; Protein Structure, Secondary ; Protein Structure, Tertiary ; Scattering, Radiation ; Transcription Factors - chemistry ; Transcription Factors - physiology ; Transcription, Genetic ; X-Rays</subject><ispartof>The Journal of biological chemistry, 2005-04, Vol.280 (15), p.14780-14789</ispartof><rights>2005 © 2005 ASBMB. Currently published by Elsevier Inc; originally published by American Society for Biochemistry and Molecular Biology.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c587t-9e8c32e9bf2350761ea517e04c1a3280793a9ef2e7876633c46f0e25cd4a1b723</citedby><cites>FETCH-LOGICAL-c587t-9e8c32e9bf2350761ea517e04c1a3280793a9ef2e7876633c46f0e25cd4a1b723</cites><orcidid>0000-0003-1551-1607 ; 0000-0002-7853-5852</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15699035$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.inrae.fr/hal-02680804$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Graille, Marc</creatorcontrib><creatorcontrib>Zhou, Cong-Zhao</creatorcontrib><creatorcontrib>Receveur-Bréchot, Véronique</creatorcontrib><creatorcontrib>Collinet, Bruno</creatorcontrib><creatorcontrib>Declerck, Nathalie</creatorcontrib><creatorcontrib>van Tilbeurgh, Herman</creatorcontrib><title>Activation of the LicT Transcriptional Antiterminator Involves a Domain Swing/Lock Mechanism Provoking Massive Structural Changes</title><title>The Journal of biological chemistry</title><addtitle>J Biol Chem</addtitle><description>The transcriptional antiterminator protein LicT regulates the expression of Bacillus subtilis operons involved in β-glucoside metabolism. It consists of an N-terminal RNA-binding domain (co-antiterminator (CAT)) and two phosphorylatable phosphotransferase system regulation domains (PRD1 and PRD2). In the activated state, each PRD forms a dimeric unit with the phosphorylation sites totally buried at the dimer interface. Here we present the 1.95 Å resolution structure of the inactive LicT PRDs as well as the molecular solution structure of the full-length protein deduced from small angle x-ray scattering. Comparison of native (inactive) and mutant (constitutively active) PRD crystal structures shows massive tertiary and quaternary rearrangements of the entire regulatory domain. In the inactive state, a wide swing movement of PRD2 results in dimer opening and brings the phosphorylation sites to the protein surface. This movement is accompanied by additional structural rearrangements of both the PRD1-PRD1 ′ interface and the CAT-PRD1 linker. Small angle x-ray scattering experiments indicate that the amplitude of the PRD2 swing might even be wider in solution than in the crystals. Our results suggest that PRD2 is highly mobile in the native protein, whereas it is locked upon activation by phosphorylation.</description><subject>Bacillus subtilis</subject><subject>Bacillus subtilis - metabolism</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - physiology</subject><subject>Biochemistry</subject><subject>Biochemistry, Molecular Biology</subject><subject>Crystallography, X-Ray</subject><subject>Dimerization</subject><subject>Life Sciences</subject><subject>Models, Biological</subject><subject>Models, Molecular</subject><subject>Mutation</subject><subject>Phosphorylation</subject><subject>Protein Conformation</subject><subject>Protein Structure, Quaternary</subject><subject>Protein Structure, Secondary</subject><subject>Protein Structure, Tertiary</subject><subject>Scattering, Radiation</subject><subject>Transcription Factors - chemistry</subject><subject>Transcription Factors - physiology</subject><subject>Transcription, Genetic</subject><subject>X-Rays</subject><issn>0021-9258</issn><issn>1083-351X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1vEzEQhlcIREPhyhH5gJA4bOrPtfcYhY9W2gikBomb5XVmE7e769R2tuLIP8dRInpCzGWkmWdezcxbFG8JnhMs-dVda-crTnjFKcX4WTEjWLGSCfLzeTHDmJKypkJdFK9ivMM5eE1eFhdEVHWNmZgVvxc2uckk50fkO5R2gBpn12gdzBhtcPtjx_RoMSaXIAxuNMkHdDNOvp8gIoM--cG4Ed0-unF71Xh7j1Zgd2Z0cUDfg5_8fW6glYnRTYBuUzjYdAhZcpmhLcTXxYvO9BHenPNl8ePL5_Xyumy-fb1ZLprSCiVTWYOyjELddpQJLCsCRhAJmFtiGFVY1szU0FGQSlYVY5ZXHQYq7IYb0krKLouPJ92d6fU-uMGEX9obp68XjT7WMK0UVphPJLMfTuw--IcDxKQHFy30vRnBH6KupKQcV_y_IJGCcSFUBucn0AYfY4Du7woE66OTOjupn5zMA-_Oyod2gM0TfrYuA-_P97jt7tEF0K3zdgeDzt_ImCZcqqOOOmGQfzs5CDpaB6OFTR6xSW-8-9cKfwBbkLh2</recordid><startdate>20050415</startdate><enddate>20050415</enddate><creator>Graille, Marc</creator><creator>Zhou, Cong-Zhao</creator><creator>Receveur-Bréchot, Véronique</creator><creator>Collinet, Bruno</creator><creator>Declerck, Nathalie</creator><creator>van Tilbeurgh, Herman</creator><general>Elsevier Inc</general><general>American Society for Biochemistry and Molecular Biology</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope><orcidid>https://orcid.org/0000-0003-1551-1607</orcidid><orcidid>https://orcid.org/0000-0002-7853-5852</orcidid></search><sort><creationdate>20050415</creationdate><title>Activation of the LicT Transcriptional Antiterminator Involves a Domain Swing/Lock Mechanism Provoking Massive Structural Changes</title><author>Graille, Marc ; Zhou, Cong-Zhao ; Receveur-Bréchot, Véronique ; Collinet, Bruno ; Declerck, Nathalie ; van Tilbeurgh, Herman</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c587t-9e8c32e9bf2350761ea517e04c1a3280793a9ef2e7876633c46f0e25cd4a1b723</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Bacillus subtilis</topic><topic>Bacillus subtilis - metabolism</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - physiology</topic><topic>Biochemistry</topic><topic>Biochemistry, Molecular Biology</topic><topic>Crystallography, X-Ray</topic><topic>Dimerization</topic><topic>Life Sciences</topic><topic>Models, Biological</topic><topic>Models, Molecular</topic><topic>Mutation</topic><topic>Phosphorylation</topic><topic>Protein Conformation</topic><topic>Protein Structure, Quaternary</topic><topic>Protein Structure, Secondary</topic><topic>Protein Structure, Tertiary</topic><topic>Scattering, Radiation</topic><topic>Transcription Factors - chemistry</topic><topic>Transcription Factors - physiology</topic><topic>Transcription, Genetic</topic><topic>X-Rays</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Graille, Marc</creatorcontrib><creatorcontrib>Zhou, Cong-Zhao</creatorcontrib><creatorcontrib>Receveur-Bréchot, Véronique</creatorcontrib><creatorcontrib>Collinet, Bruno</creatorcontrib><creatorcontrib>Declerck, Nathalie</creatorcontrib><creatorcontrib>van Tilbeurgh, Herman</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><jtitle>The Journal of biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Graille, Marc</au><au>Zhou, Cong-Zhao</au><au>Receveur-Bréchot, Véronique</au><au>Collinet, Bruno</au><au>Declerck, Nathalie</au><au>van Tilbeurgh, Herman</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Activation of the LicT Transcriptional Antiterminator Involves a Domain Swing/Lock Mechanism Provoking Massive Structural Changes</atitle><jtitle>The Journal of biological chemistry</jtitle><addtitle>J Biol Chem</addtitle><date>2005-04-15</date><risdate>2005</risdate><volume>280</volume><issue>15</issue><spage>14780</spage><epage>14789</epage><pages>14780-14789</pages><issn>0021-9258</issn><eissn>1083-351X</eissn><abstract>The transcriptional antiterminator protein LicT regulates the expression of Bacillus subtilis operons involved in β-glucoside metabolism. It consists of an N-terminal RNA-binding domain (co-antiterminator (CAT)) and two phosphorylatable phosphotransferase system regulation domains (PRD1 and PRD2). In the activated state, each PRD forms a dimeric unit with the phosphorylation sites totally buried at the dimer interface. Here we present the 1.95 Å resolution structure of the inactive LicT PRDs as well as the molecular solution structure of the full-length protein deduced from small angle x-ray scattering. Comparison of native (inactive) and mutant (constitutively active) PRD crystal structures shows massive tertiary and quaternary rearrangements of the entire regulatory domain. In the inactive state, a wide swing movement of PRD2 results in dimer opening and brings the phosphorylation sites to the protein surface. This movement is accompanied by additional structural rearrangements of both the PRD1-PRD1 ′ interface and the CAT-PRD1 linker. Small angle x-ray scattering experiments indicate that the amplitude of the PRD2 swing might even be wider in solution than in the crystals. Our results suggest that PRD2 is highly mobile in the native protein, whereas it is locked upon activation by phosphorylation.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>15699035</pmid><doi>10.1074/jbc.M414642200</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0003-1551-1607</orcidid><orcidid>https://orcid.org/0000-0002-7853-5852</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Bacillus subtilis Bacillus subtilis - metabolism Bacterial Proteins - chemistry Bacterial Proteins - physiology Biochemistry Biochemistry, Molecular Biology Crystallography, X-Ray Dimerization Life Sciences Models, Biological Models, Molecular Mutation Phosphorylation Protein Conformation Protein Structure, Quaternary Protein Structure, Secondary Protein Structure, Tertiary Scattering, Radiation Transcription Factors - chemistry Transcription Factors - physiology Transcription, Genetic X-Rays |
title | Activation of the LicT Transcriptional Antiterminator Involves a Domain Swing/Lock Mechanism Provoking Massive Structural Changes |
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