X-ray tomographic and hydraulic characterization of burrowing by three earthworm species in repacked soil cores
To test the assumption that different earthworm species make differently-structured burrow systems that can affect water permeability, the burrow systems made by adults of three earthworms species ( Lumbricus terrestris, Nicodrilus giardi and Octalasion lacteum) were studied in repacked soil cores (...
Gespeichert in:
| Veröffentlicht in: | Applied soil ecology : a section of Agriculture, ecosystems & environment ecosystems & environment, 2003, Vol.24 (1), p.3-16 |
|---|---|
| Hauptverfasser: | , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 16 |
|---|---|
| container_issue | 1 |
| container_start_page | 3 |
| container_title | Applied soil ecology : a section of Agriculture, ecosystems & environment |
| container_volume | 24 |
| creator | Bastardie, F Capowiez, Y de Dreuzy, J.-R Cluzeau, D |
| description | To test the assumption that different earthworm species make differently-structured burrow systems that can affect water permeability, the burrow systems made by adults of three earthworms species (
Lumbricus terrestris,
Nicodrilus giardi and
Octalasion lacteum) were studied in repacked soil cores (20
cm diameter by 40
cm high) under controlled conditions of temperature and humidity. Five core were used for each species and one adult earthworm was incubated per soil core over 21 days. Three-dimensional reconstruction (skeletons and volumetric images) of the burrow systems was performed and characterized after computer analysis of the 2D-slices from X-rays tomography. Total burrow length, number of burrows, branching rate, connectivity, burrow continuity, mean verticality and mean sinuosity of the burrows were measured from the skeletons. Differences were found between species in burrow characteristics: only one vertical and continuous burrow with large diameter for
L. terrestris; long and complex burrow systems with branching burrows for
N. giardi and
O. lacteum. Moreover, 3D volume reconstruction of burrow systems enabled determination of the total volume, the distributed burrow volume as a function of depth and, using the tools of mathematical morphology, the pore size distribution of burrows. Results showed that the burrow volume of
N. giardi was the highest; the three species had a unimodal pore size distribution centered on 8, 7 and 5
mm in diameter for
L. terrestris,
N. giardi and
O. lacteum, respectively. Saturated hydraulic permeability was measured for each core and predicted using a water flow model. Significant differences between species were found, the burrow systems made by
N. giardi being the most efficient for water flow. Differences in hydraulic properties between species resulted mainly from the difference in burrow continuity, the presence of openings at the soil surface and the burrow depth penetration. |
| doi_str_mv | 10.1016/S0929-1393(03)00071-4 |
| format | Article |
| fullrecord | <record><control><sourceid>hal_cross</sourceid><recordid>TN_cdi_hal_primary_oai_HAL_hal_02673429v1</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0929139303000714</els_id><sourcerecordid>oai_HAL_hal_02673429v1</sourcerecordid><originalsourceid>FETCH-LOGICAL-c395t-4120e11eee24e8b468efc48e3195b9e1169ee537bfed3dab804972275d9411293</originalsourceid><addsrcrecordid>eNqFkF1rFDEUQAdRcK3-BDEvgn0YvfmYjzxJKdUKCz7Ugm_hTubOTnR2MtxMW9Zfb9aV-igEQpJzLuEUxWsJ7yXI-sMNWGVLqa1-B_ocABpZmifFRraNLkE16mmxeUSeFy9S-pGhSrV6U8TvJeNBrHEfd4zLGLzAuRfjoWe8m_LJj8joV-LwC9cQZxEH0d0xx4cw70SX1ZGJBCGv40PkvUgL-UBJhFkwLeh_Ui9SDJPwkSm9LJ4NOCV69Xc_K24_XX27vC63Xz9_ubzYll7bai2NVEBSEpEy1HambmnwpiUtbdXZ_FJboko33UC97rFrwdhGqabqrZFSWX1WnJ_mjji5hcMe-eAiBnd9sXXHO1B1o42y9zKz1Yn1HFNiGh4FCe5Y2P0p7I75HOR1LOxM9t6evAWTx2lgnH1I_-QKbNWqKnNvTtyA0eGOM3N7o0BqAFsDmDoTH08E5ST3gdil3HD21Acmv7o-hv_85TenUZnQ</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>X-ray tomographic and hydraulic characterization of burrowing by three earthworm species in repacked soil cores</title><source>Elsevier ScienceDirect Journals</source><creator>Bastardie, F ; Capowiez, Y ; de Dreuzy, J.-R ; Cluzeau, D</creator><creatorcontrib>Bastardie, F ; Capowiez, Y ; de Dreuzy, J.-R ; Cluzeau, D</creatorcontrib><description>To test the assumption that different earthworm species make differently-structured burrow systems that can affect water permeability, the burrow systems made by adults of three earthworms species (
Lumbricus terrestris,
Nicodrilus giardi and
Octalasion lacteum) were studied in repacked soil cores (20
cm diameter by 40
cm high) under controlled conditions of temperature and humidity. Five core were used for each species and one adult earthworm was incubated per soil core over 21 days. Three-dimensional reconstruction (skeletons and volumetric images) of the burrow systems was performed and characterized after computer analysis of the 2D-slices from X-rays tomography. Total burrow length, number of burrows, branching rate, connectivity, burrow continuity, mean verticality and mean sinuosity of the burrows were measured from the skeletons. Differences were found between species in burrow characteristics: only one vertical and continuous burrow with large diameter for
L. terrestris; long and complex burrow systems with branching burrows for
N. giardi and
O. lacteum. Moreover, 3D volume reconstruction of burrow systems enabled determination of the total volume, the distributed burrow volume as a function of depth and, using the tools of mathematical morphology, the pore size distribution of burrows. Results showed that the burrow volume of
N. giardi was the highest; the three species had a unimodal pore size distribution centered on 8, 7 and 5
mm in diameter for
L. terrestris,
N. giardi and
O. lacteum, respectively. Saturated hydraulic permeability was measured for each core and predicted using a water flow model. Significant differences between species were found, the burrow systems made by
N. giardi being the most efficient for water flow. Differences in hydraulic properties between species resulted mainly from the difference in burrow continuity, the presence of openings at the soil surface and the burrow depth penetration.</description><identifier>ISSN: 0929-1393</identifier><identifier>EISSN: 1873-0272</identifier><identifier>DOI: 10.1016/S0929-1393(03)00071-4</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>Agronomy. Soil science and plant productions ; Biochemistry and biology ; Biological and medical sciences ; Burrow systems ; burrowing ; Chemical, physicochemical, biochemical and biological properties ; Earthworms ; Fundamental and applied biological sciences. Psychology ; Life Sciences ; Lumbricus terrestris ; macropore flow ; mathematical models ; Mathematical morphology ; Nicodrilus girardi ; Octalasion lacetum ; Permeability ; Physics, chemistry, biochemistry and biology of agricultural and forest soils ; saturated hydraulic conductivity ; Soil science ; spatial distribution ; tomography ; Water flow model ; X-radiation ; X-ray tomography ; Zoology (interactions between soil fauna and agricultural or forest soils)</subject><ispartof>Applied soil ecology : a section of Agriculture, ecosystems & environment, 2003, Vol.24 (1), p.3-16</ispartof><rights>2003 Elsevier B.V.</rights><rights>2004 INIST-CNRS</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c395t-4120e11eee24e8b468efc48e3195b9e1169ee537bfed3dab804972275d9411293</citedby><cites>FETCH-LOGICAL-c395t-4120e11eee24e8b468efc48e3195b9e1169ee537bfed3dab804972275d9411293</cites><orcidid>0000-0003-2993-2015 ; 0000-0001-5495-5775</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/S0929-1393(03)00071-4$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,314,777,781,882,3537,4010,27904,27905,27906,45976</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=15095825$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.inrae.fr/hal-02673429$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Bastardie, F</creatorcontrib><creatorcontrib>Capowiez, Y</creatorcontrib><creatorcontrib>de Dreuzy, J.-R</creatorcontrib><creatorcontrib>Cluzeau, D</creatorcontrib><title>X-ray tomographic and hydraulic characterization of burrowing by three earthworm species in repacked soil cores</title><title>Applied soil ecology : a section of Agriculture, ecosystems & environment</title><description>To test the assumption that different earthworm species make differently-structured burrow systems that can affect water permeability, the burrow systems made by adults of three earthworms species (
Lumbricus terrestris,
Nicodrilus giardi and
Octalasion lacteum) were studied in repacked soil cores (20
cm diameter by 40
cm high) under controlled conditions of temperature and humidity. Five core were used for each species and one adult earthworm was incubated per soil core over 21 days. Three-dimensional reconstruction (skeletons and volumetric images) of the burrow systems was performed and characterized after computer analysis of the 2D-slices from X-rays tomography. Total burrow length, number of burrows, branching rate, connectivity, burrow continuity, mean verticality and mean sinuosity of the burrows were measured from the skeletons. Differences were found between species in burrow characteristics: only one vertical and continuous burrow with large diameter for
L. terrestris; long and complex burrow systems with branching burrows for
N. giardi and
O. lacteum. Moreover, 3D volume reconstruction of burrow systems enabled determination of the total volume, the distributed burrow volume as a function of depth and, using the tools of mathematical morphology, the pore size distribution of burrows. Results showed that the burrow volume of
N. giardi was the highest; the three species had a unimodal pore size distribution centered on 8, 7 and 5
mm in diameter for
L. terrestris,
N. giardi and
O. lacteum, respectively. Saturated hydraulic permeability was measured for each core and predicted using a water flow model. Significant differences between species were found, the burrow systems made by
N. giardi being the most efficient for water flow. Differences in hydraulic properties between species resulted mainly from the difference in burrow continuity, the presence of openings at the soil surface and the burrow depth penetration.</description><subject>Agronomy. Soil science and plant productions</subject><subject>Biochemistry and biology</subject><subject>Biological and medical sciences</subject><subject>Burrow systems</subject><subject>burrowing</subject><subject>Chemical, physicochemical, biochemical and biological properties</subject><subject>Earthworms</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Life Sciences</subject><subject>Lumbricus terrestris</subject><subject>macropore flow</subject><subject>mathematical models</subject><subject>Mathematical morphology</subject><subject>Nicodrilus girardi</subject><subject>Octalasion lacetum</subject><subject>Permeability</subject><subject>Physics, chemistry, biochemistry and biology of agricultural and forest soils</subject><subject>saturated hydraulic conductivity</subject><subject>Soil science</subject><subject>spatial distribution</subject><subject>tomography</subject><subject>Water flow model</subject><subject>X-radiation</subject><subject>X-ray tomography</subject><subject>Zoology (interactions between soil fauna and agricultural or forest soils)</subject><issn>0929-1393</issn><issn>1873-0272</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><recordid>eNqFkF1rFDEUQAdRcK3-BDEvgn0YvfmYjzxJKdUKCz7Ugm_hTubOTnR2MtxMW9Zfb9aV-igEQpJzLuEUxWsJ7yXI-sMNWGVLqa1-B_ocABpZmifFRraNLkE16mmxeUSeFy9S-pGhSrV6U8TvJeNBrHEfd4zLGLzAuRfjoWe8m_LJj8joV-LwC9cQZxEH0d0xx4cw70SX1ZGJBCGv40PkvUgL-UBJhFkwLeh_Ui9SDJPwkSm9LJ4NOCV69Xc_K24_XX27vC63Xz9_ubzYll7bai2NVEBSEpEy1HambmnwpiUtbdXZ_FJboko33UC97rFrwdhGqabqrZFSWX1WnJ_mjji5hcMe-eAiBnd9sXXHO1B1o42y9zKz1Yn1HFNiGh4FCe5Y2P0p7I75HOR1LOxM9t6evAWTx2lgnH1I_-QKbNWqKnNvTtyA0eGOM3N7o0BqAFsDmDoTH08E5ST3gdil3HD21Acmv7o-hv_85TenUZnQ</recordid><startdate>2003</startdate><enddate>2003</enddate><creator>Bastardie, F</creator><creator>Capowiez, Y</creator><creator>de Dreuzy, J.-R</creator><creator>Cluzeau, D</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>FBQ</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>1XC</scope><orcidid>https://orcid.org/0000-0003-2993-2015</orcidid><orcidid>https://orcid.org/0000-0001-5495-5775</orcidid></search><sort><creationdate>2003</creationdate><title>X-ray tomographic and hydraulic characterization of burrowing by three earthworm species in repacked soil cores</title><author>Bastardie, F ; Capowiez, Y ; de Dreuzy, J.-R ; Cluzeau, D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c395t-4120e11eee24e8b468efc48e3195b9e1169ee537bfed3dab804972275d9411293</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Agronomy. Soil science and plant productions</topic><topic>Biochemistry and biology</topic><topic>Biological and medical sciences</topic><topic>Burrow systems</topic><topic>burrowing</topic><topic>Chemical, physicochemical, biochemical and biological properties</topic><topic>Earthworms</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Life Sciences</topic><topic>Lumbricus terrestris</topic><topic>macropore flow</topic><topic>mathematical models</topic><topic>Mathematical morphology</topic><topic>Nicodrilus girardi</topic><topic>Octalasion lacetum</topic><topic>Permeability</topic><topic>Physics, chemistry, biochemistry and biology of agricultural and forest soils</topic><topic>saturated hydraulic conductivity</topic><topic>Soil science</topic><topic>spatial distribution</topic><topic>tomography</topic><topic>Water flow model</topic><topic>X-radiation</topic><topic>X-ray tomography</topic><topic>Zoology (interactions between soil fauna and agricultural or forest soils)</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bastardie, F</creatorcontrib><creatorcontrib>Capowiez, Y</creatorcontrib><creatorcontrib>de Dreuzy, J.-R</creatorcontrib><creatorcontrib>Cluzeau, D</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Applied soil ecology : a section of Agriculture, ecosystems & environment</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bastardie, F</au><au>Capowiez, Y</au><au>de Dreuzy, J.-R</au><au>Cluzeau, D</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>X-ray tomographic and hydraulic characterization of burrowing by three earthworm species in repacked soil cores</atitle><jtitle>Applied soil ecology : a section of Agriculture, ecosystems & environment</jtitle><date>2003</date><risdate>2003</risdate><volume>24</volume><issue>1</issue><spage>3</spage><epage>16</epage><pages>3-16</pages><issn>0929-1393</issn><eissn>1873-0272</eissn><abstract>To test the assumption that different earthworm species make differently-structured burrow systems that can affect water permeability, the burrow systems made by adults of three earthworms species (
Lumbricus terrestris,
Nicodrilus giardi and
Octalasion lacteum) were studied in repacked soil cores (20
cm diameter by 40
cm high) under controlled conditions of temperature and humidity. Five core were used for each species and one adult earthworm was incubated per soil core over 21 days. Three-dimensional reconstruction (skeletons and volumetric images) of the burrow systems was performed and characterized after computer analysis of the 2D-slices from X-rays tomography. Total burrow length, number of burrows, branching rate, connectivity, burrow continuity, mean verticality and mean sinuosity of the burrows were measured from the skeletons. Differences were found between species in burrow characteristics: only one vertical and continuous burrow with large diameter for
L. terrestris; long and complex burrow systems with branching burrows for
N. giardi and
O. lacteum. Moreover, 3D volume reconstruction of burrow systems enabled determination of the total volume, the distributed burrow volume as a function of depth and, using the tools of mathematical morphology, the pore size distribution of burrows. Results showed that the burrow volume of
N. giardi was the highest; the three species had a unimodal pore size distribution centered on 8, 7 and 5
mm in diameter for
L. terrestris,
N. giardi and
O. lacteum, respectively. Saturated hydraulic permeability was measured for each core and predicted using a water flow model. Significant differences between species were found, the burrow systems made by
N. giardi being the most efficient for water flow. Differences in hydraulic properties between species resulted mainly from the difference in burrow continuity, the presence of openings at the soil surface and the burrow depth penetration.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><doi>10.1016/S0929-1393(03)00071-4</doi><tpages>14</tpages><orcidid>https://orcid.org/0000-0003-2993-2015</orcidid><orcidid>https://orcid.org/0000-0001-5495-5775</orcidid></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0929-1393 |
| ispartof | Applied soil ecology : a section of Agriculture, ecosystems & environment, 2003, Vol.24 (1), p.3-16 |
| issn | 0929-1393 1873-0272 |
| language | eng |
| recordid | cdi_hal_primary_oai_HAL_hal_02673429v1 |
| source | Elsevier ScienceDirect Journals |
| subjects | Agronomy. Soil science and plant productions Biochemistry and biology Biological and medical sciences Burrow systems burrowing Chemical, physicochemical, biochemical and biological properties Earthworms Fundamental and applied biological sciences. Psychology Life Sciences Lumbricus terrestris macropore flow mathematical models Mathematical morphology Nicodrilus girardi Octalasion lacetum Permeability Physics, chemistry, biochemistry and biology of agricultural and forest soils saturated hydraulic conductivity Soil science spatial distribution tomography Water flow model X-radiation X-ray tomography Zoology (interactions between soil fauna and agricultural or forest soils) |
| title | X-ray tomographic and hydraulic characterization of burrowing by three earthworm species in repacked soil cores |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-20T17%3A21%3A36IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-hal_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=X-ray%20tomographic%20and%20hydraulic%20characterization%20of%20burrowing%20by%20three%20earthworm%20species%20in%20repacked%20soil%20cores&rft.jtitle=Applied%20soil%20ecology%20:%20a%20section%20of%20Agriculture,%20ecosystems%20&%20environment&rft.au=Bastardie,%20F&rft.date=2003&rft.volume=24&rft.issue=1&rft.spage=3&rft.epage=16&rft.pages=3-16&rft.issn=0929-1393&rft.eissn=1873-0272&rft_id=info:doi/10.1016/S0929-1393(03)00071-4&rft_dat=%3Chal_cross%3Eoai_HAL_hal_02673429v1%3C/hal_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rft_els_id=S0929139303000714&rfr_iscdi=true |