Efficient mineral weathering is a distinctive functional trait of the bacterial genus Collimonas
The mineral weathering ability of 45 bacterial strains belonging to the genus Collimonas and coming from various terrestrial environments was compared to that of 5 representatives from the closely related genera Herbaspirillum and Janthinobacterium. Using glucose as the sole carbon source in a micro...
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description | The mineral weathering ability of 45 bacterial strains belonging to the genus
Collimonas and coming from various terrestrial environments was compared to that of 5 representatives from the closely related genera
Herbaspirillum and
Janthinobacterium. Using glucose as the sole carbon source in a microplate assay for quantifying the release of iron and protons from biotite, all
Collimonas strains proved to be very efficient weathering agents, in contrast to the
Herbaspirillum and
Janthinobacterium strains. The weathering phenotype was also evident during growth of collimonads on mannitol and trehalose, but not on gluconic acid. All
Collimonas strains were able to solubilize inorganic phosphorus and produce gluconic acid from glucose, suggesting that acidification is one of the main mechanisms used by these bacteria for mineral weathering. The production of siderophores may also be involved, but this trait, measured as the ability of collimonads to mobilize iron, was shared with
Herbaspirillum and
Janthinobacterium strains. These findings are discussed in an ecological context that recognizes collimonads as mycophagous (fungal-eating) and efficient mineral weathering bacteria and suggests that this ability has evolved as an adaptation to nutrient-poor conditions, possibly as part of a mutualistic relationship with mycorrhizal fungi. |
doi_str_mv | 10.1016/j.soilbio.2009.07.031 |
format | Article |
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Collimonas and coming from various terrestrial environments was compared to that of 5 representatives from the closely related genera
Herbaspirillum and
Janthinobacterium. Using glucose as the sole carbon source in a microplate assay for quantifying the release of iron and protons from biotite, all
Collimonas strains proved to be very efficient weathering agents, in contrast to the
Herbaspirillum and
Janthinobacterium strains. The weathering phenotype was also evident during growth of collimonads on mannitol and trehalose, but not on gluconic acid. All
Collimonas strains were able to solubilize inorganic phosphorus and produce gluconic acid from glucose, suggesting that acidification is one of the main mechanisms used by these bacteria for mineral weathering. The production of siderophores may also be involved, but this trait, measured as the ability of collimonads to mobilize iron, was shared with
Herbaspirillum and
Janthinobacterium strains. These findings are discussed in an ecological context that recognizes collimonads as mycophagous (fungal-eating) and efficient mineral weathering bacteria and suggests that this ability has evolved as an adaptation to nutrient-poor conditions, possibly as part of a mutualistic relationship with mycorrhizal fungi.</description><identifier>ISSN: 0038-0717</identifier><identifier>EISSN: 1879-3428</identifier><identifier>DOI: 10.1016/j.soilbio.2009.07.031</identifier><identifier>CODEN: SBIOAH</identifier><language>eng</language><publisher>Amsterdam: Elsevier Ltd</publisher><subject>acidification ; Agricultural sciences ; Agronomy. Soil science and plant productions ; bioassays ; Biochemistry and biology ; Biological and medical sciences ; Biotite ; Chemical, physicochemical, biochemical and biological properties ; Collimonas ; ecological function ; Economic plant physiology ; Fundamental and applied biological sciences. Psychology ; gluconic acid ; glucose ; Herbaspirillum ; in vitro studies ; iron ; Janthinobacterium ; Life Sciences ; mannitol ; Mechanism ; Mineral weathering ; mycophagous bacteria ; Mycorrhizosphere ; Nutrient-poor environment ; Oxalobacteraceae ; phenotype ; phosphorus ; Physics, chemistry, biochemistry and biology of agricultural and forest soils ; protons ; siderophores ; soil bacteria ; soil ecology ; Soil science ; Soil study ; soil weathering ; solubilization ; Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...) ; trehalose ; weathering</subject><ispartof>Soil biology & biochemistry, 2009-10, Vol.41 (10), p.2178-2186</ispartof><rights>2009 Elsevier Ltd</rights><rights>2015 INIST-CNRS</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c494t-3062b4758ced11c489e7c09b0c36e226a6981271ebbbd14adc8867935df216e3</citedby><orcidid>0000-0001-9412-7210</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.soilbio.2009.07.031$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,315,781,785,886,3551,27926,27927,45997</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=22238905$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.inrae.fr/hal-02659896$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Uroz, S.</creatorcontrib><creatorcontrib>Calvaruso, C.</creatorcontrib><creatorcontrib>Turpault, M.P.</creatorcontrib><creatorcontrib>Sarniguet, A.</creatorcontrib><creatorcontrib>de Boer, W.</creatorcontrib><creatorcontrib>Leveau, J.H.J.</creatorcontrib><creatorcontrib>Frey-Klett, P.</creatorcontrib><title>Efficient mineral weathering is a distinctive functional trait of the bacterial genus Collimonas</title><title>Soil biology & biochemistry</title><description>The mineral weathering ability of 45 bacterial strains belonging to the genus
Collimonas and coming from various terrestrial environments was compared to that of 5 representatives from the closely related genera
Herbaspirillum and
Janthinobacterium. Using glucose as the sole carbon source in a microplate assay for quantifying the release of iron and protons from biotite, all
Collimonas strains proved to be very efficient weathering agents, in contrast to the
Herbaspirillum and
Janthinobacterium strains. The weathering phenotype was also evident during growth of collimonads on mannitol and trehalose, but not on gluconic acid. All
Collimonas strains were able to solubilize inorganic phosphorus and produce gluconic acid from glucose, suggesting that acidification is one of the main mechanisms used by these bacteria for mineral weathering. The production of siderophores may also be involved, but this trait, measured as the ability of collimonads to mobilize iron, was shared with
Herbaspirillum and
Janthinobacterium strains. These findings are discussed in an ecological context that recognizes collimonads as mycophagous (fungal-eating) and efficient mineral weathering bacteria and suggests that this ability has evolved as an adaptation to nutrient-poor conditions, possibly as part of a mutualistic relationship with mycorrhizal fungi.</description><subject>acidification</subject><subject>Agricultural sciences</subject><subject>Agronomy. Soil science and plant productions</subject><subject>bioassays</subject><subject>Biochemistry and biology</subject><subject>Biological and medical sciences</subject><subject>Biotite</subject><subject>Chemical, physicochemical, biochemical and biological properties</subject><subject>Collimonas</subject><subject>ecological function</subject><subject>Economic plant physiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>gluconic acid</subject><subject>glucose</subject><subject>Herbaspirillum</subject><subject>in vitro studies</subject><subject>iron</subject><subject>Janthinobacterium</subject><subject>Life Sciences</subject><subject>mannitol</subject><subject>Mechanism</subject><subject>Mineral weathering</subject><subject>mycophagous bacteria</subject><subject>Mycorrhizosphere</subject><subject>Nutrient-poor environment</subject><subject>Oxalobacteraceae</subject><subject>phenotype</subject><subject>phosphorus</subject><subject>Physics, chemistry, biochemistry and biology of agricultural and forest soils</subject><subject>protons</subject><subject>siderophores</subject><subject>soil bacteria</subject><subject>soil ecology</subject><subject>Soil science</subject><subject>Soil study</subject><subject>soil weathering</subject><subject>solubilization</subject><subject>Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...)</subject><subject>trehalose</subject><subject>weathering</subject><issn>0038-0717</issn><issn>1879-3428</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><recordid>eNqFkc1u1DAURiMEEkPhERDegMQi4dpO_LNC1ai0SCOxoKyN49xMPcrExfYM4u1xlFG3Xdm6Ot_nq-Oqek-hoUDFl0OTgp96HxoGoBuQDXD6otpQJXXNW6ZeVhsArmqQVL6u3qR0AADWUb6pft-Mo3ce50yOfsZoJ_IXbX7A6Oc98YlYMviU_eyyPyMZT8slzAXL0fpMwkgKTHrrcomU8R7nUyLbME3-WLj0tno12inhu8t5Vd1_u7nf3tW7H7fft9e72rW6zTUHwfpWdsrhQKlrlUbpQPfguEDGhBVaUSYp9n0_0NYOTikhNe-GkVGB_Kr6vNY-2Mk8Rn-08Z8J1pu7651ZZsBEp5UWZ1rYTyv7GMOfE6Zsjj45nCY7Yzglwyho2gldwG4FXQwpRRyfmimYRb05mIt6s6g3IE1RX3IfLw_Y5Ow0Rjs7n57CjDGuNHSF-7Byow3G7mNhfv1kQHmp1iCAF-LrSmBRd_YYTVo-q0jyEV02Q_DP7PIfN2ul2g</recordid><startdate>20091001</startdate><enddate>20091001</enddate><creator>Uroz, S.</creator><creator>Calvaruso, C.</creator><creator>Turpault, M.P.</creator><creator>Sarniguet, A.</creator><creator>de Boer, W.</creator><creator>Leveau, J.H.J.</creator><creator>Frey-Klett, P.</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>FBQ</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7SN</scope><scope>7T7</scope><scope>7UA</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>1XC</scope><orcidid>https://orcid.org/0000-0001-9412-7210</orcidid></search><sort><creationdate>20091001</creationdate><title>Efficient mineral weathering is a distinctive functional trait of the bacterial genus Collimonas</title><author>Uroz, S. ; Calvaruso, C. ; Turpault, M.P. ; Sarniguet, A. ; de Boer, W. ; Leveau, J.H.J. ; Frey-Klett, P.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c494t-3062b4758ced11c489e7c09b0c36e226a6981271ebbbd14adc8867935df216e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>acidification</topic><topic>Agricultural sciences</topic><topic>Agronomy. Soil science and plant productions</topic><topic>bioassays</topic><topic>Biochemistry and biology</topic><topic>Biological and medical sciences</topic><topic>Biotite</topic><topic>Chemical, physicochemical, biochemical and biological properties</topic><topic>Collimonas</topic><topic>ecological function</topic><topic>Economic plant physiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>gluconic acid</topic><topic>glucose</topic><topic>Herbaspirillum</topic><topic>in vitro studies</topic><topic>iron</topic><topic>Janthinobacterium</topic><topic>Life Sciences</topic><topic>mannitol</topic><topic>Mechanism</topic><topic>Mineral weathering</topic><topic>mycophagous bacteria</topic><topic>Mycorrhizosphere</topic><topic>Nutrient-poor environment</topic><topic>Oxalobacteraceae</topic><topic>phenotype</topic><topic>phosphorus</topic><topic>Physics, chemistry, biochemistry and biology of agricultural and forest soils</topic><topic>protons</topic><topic>siderophores</topic><topic>soil bacteria</topic><topic>soil ecology</topic><topic>Soil science</topic><topic>Soil study</topic><topic>soil weathering</topic><topic>solubilization</topic><topic>Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...)</topic><topic>trehalose</topic><topic>weathering</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Uroz, S.</creatorcontrib><creatorcontrib>Calvaruso, C.</creatorcontrib><creatorcontrib>Turpault, M.P.</creatorcontrib><creatorcontrib>Sarniguet, A.</creatorcontrib><creatorcontrib>de Boer, W.</creatorcontrib><creatorcontrib>Leveau, J.H.J.</creatorcontrib><creatorcontrib>Frey-Klett, P.</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Ecology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Water Resources Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Soil biology & biochemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Uroz, S.</au><au>Calvaruso, C.</au><au>Turpault, M.P.</au><au>Sarniguet, A.</au><au>de Boer, W.</au><au>Leveau, J.H.J.</au><au>Frey-Klett, P.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Efficient mineral weathering is a distinctive functional trait of the bacterial genus Collimonas</atitle><jtitle>Soil biology & biochemistry</jtitle><date>2009-10-01</date><risdate>2009</risdate><volume>41</volume><issue>10</issue><spage>2178</spage><epage>2186</epage><pages>2178-2186</pages><issn>0038-0717</issn><eissn>1879-3428</eissn><coden>SBIOAH</coden><abstract>The mineral weathering ability of 45 bacterial strains belonging to the genus
Collimonas and coming from various terrestrial environments was compared to that of 5 representatives from the closely related genera
Herbaspirillum and
Janthinobacterium. Using glucose as the sole carbon source in a microplate assay for quantifying the release of iron and protons from biotite, all
Collimonas strains proved to be very efficient weathering agents, in contrast to the
Herbaspirillum and
Janthinobacterium strains. The weathering phenotype was also evident during growth of collimonads on mannitol and trehalose, but not on gluconic acid. All
Collimonas strains were able to solubilize inorganic phosphorus and produce gluconic acid from glucose, suggesting that acidification is one of the main mechanisms used by these bacteria for mineral weathering. The production of siderophores may also be involved, but this trait, measured as the ability of collimonads to mobilize iron, was shared with
Herbaspirillum and
Janthinobacterium strains. These findings are discussed in an ecological context that recognizes collimonads as mycophagous (fungal-eating) and efficient mineral weathering bacteria and suggests that this ability has evolved as an adaptation to nutrient-poor conditions, possibly as part of a mutualistic relationship with mycorrhizal fungi.</abstract><cop>Amsterdam</cop><pub>Elsevier Ltd</pub><doi>10.1016/j.soilbio.2009.07.031</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0001-9412-7210</orcidid></addata></record> |
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subjects | acidification Agricultural sciences Agronomy. Soil science and plant productions bioassays Biochemistry and biology Biological and medical sciences Biotite Chemical, physicochemical, biochemical and biological properties Collimonas ecological function Economic plant physiology Fundamental and applied biological sciences. Psychology gluconic acid glucose Herbaspirillum in vitro studies iron Janthinobacterium Life Sciences mannitol Mechanism Mineral weathering mycophagous bacteria Mycorrhizosphere Nutrient-poor environment Oxalobacteraceae phenotype phosphorus Physics, chemistry, biochemistry and biology of agricultural and forest soils protons siderophores soil bacteria soil ecology Soil science Soil study soil weathering solubilization Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...) trehalose weathering |
title | Efficient mineral weathering is a distinctive functional trait of the bacterial genus Collimonas |
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