Fine mapping of LrSV2, a race-specific adult plant leaf rust resistance gene on wheat chromosome 3BS

KEY MESSAGE : Fine mapping permits the precise positioning of genes within chromosomes, prerequisite for positional cloning that will allow its rational use and the study of the underlying molecular action mechanism. Three leaf rust resistance genes were identified in the durable leaf rust resistant...

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Veröffentlicht in:Theoretical and applied genetics 2014-05, Vol.127 (5), p.1133-1141
Hauptverfasser: Diéguez, M. J, Pergolesi, M. F, Velasquez, S. M, Ingala, L, López, M, Darino, M, Paux, E, Feuillet, C, Sacco, F
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container_issue 5
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container_title Theoretical and applied genetics
container_volume 127
creator Diéguez, M. J
Pergolesi, M. F
Velasquez, S. M
Ingala, L
López, M
Darino, M
Paux, E
Feuillet, C
Sacco, F
description KEY MESSAGE : Fine mapping permits the precise positioning of genes within chromosomes, prerequisite for positional cloning that will allow its rational use and the study of the underlying molecular action mechanism. Three leaf rust resistance genes were identified in the durable leaf rust resistant Argentinean wheat variety Sinvalocho MA: the seedling resistance gene Lr3 on distal 6BL and two adult plant resistance genes, LrSV1 and LrSV2, on chromosomes 2DS and 3BS, respectively. To develop a high-resolution genetic map for LrSV2, 10 markers were genotyped on 343 F2 individuals from a cross between Sinvalocho MA and Gama6. The closest co-dominant markers on both sides of the gene (3 microsatellites and 2 STMs) were analyzed on 965 additional F2s from the same cross. Microsatellite marker cfb5010 cosegregated with LrSV2 whereas flanking markers were found at 1 cM distal and at 0.3 cM proximal to the gene. SSR markers designed from the sequences of cv Chinese Spring BAC clones spanning the LrSV2 genetic interval were tested on the recombinants, allowing the identification of microsatellite swm13 at 0.15 cM distal to LrSV2. This delimited an interval of 0.45 cM around the gene flanked by the SSR markers swm13 and gwm533 at the subtelomeric end of chromosome 3BS.
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The closest co-dominant markers on both sides of the gene (3 microsatellites and 2 STMs) were analyzed on 965 additional F2s from the same cross. Microsatellite marker cfb5010 cosegregated with LrSV2 whereas flanking markers were found at 1 cM distal and at 0.3 cM proximal to the gene. SSR markers designed from the sequences of cv Chinese Spring BAC clones spanning the LrSV2 genetic interval were tested on the recombinants, allowing the identification of microsatellite swm13 at 0.15 cM distal to LrSV2. 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J</au><au>Pergolesi, M. F</au><au>Velasquez, S. M</au><au>Ingala, L</au><au>López, M</au><au>Darino, M</au><au>Paux, E</au><au>Feuillet, C</au><au>Sacco, F</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Fine mapping of LrSV2, a race-specific adult plant leaf rust resistance gene on wheat chromosome 3BS</atitle><jtitle>Theoretical and applied genetics</jtitle><stitle>Theor Appl Genet</stitle><addtitle>Theor Appl Genet</addtitle><date>2014-05-01</date><risdate>2014</risdate><volume>127</volume><issue>5</issue><spage>1133</spage><epage>1141</epage><pages>1133-1141</pages><issn>0040-5752</issn><eissn>1432-2242</eissn><abstract>KEY MESSAGE : Fine mapping permits the precise positioning of genes within chromosomes, prerequisite for positional cloning that will allow its rational use and the study of the underlying molecular action mechanism. Three leaf rust resistance genes were identified in the durable leaf rust resistant Argentinean wheat variety Sinvalocho MA: the seedling resistance gene Lr3 on distal 6BL and two adult plant resistance genes, LrSV1 and LrSV2, on chromosomes 2DS and 3BS, respectively. To develop a high-resolution genetic map for LrSV2, 10 markers were genotyped on 343 F2 individuals from a cross between Sinvalocho MA and Gama6. The closest co-dominant markers on both sides of the gene (3 microsatellites and 2 STMs) were analyzed on 965 additional F2s from the same cross. Microsatellite marker cfb5010 cosegregated with LrSV2 whereas flanking markers were found at 1 cM distal and at 0.3 cM proximal to the gene. SSR markers designed from the sequences of cv Chinese Spring BAC clones spanning the LrSV2 genetic interval were tested on the recombinants, allowing the identification of microsatellite swm13 at 0.15 cM distal to LrSV2. This delimited an interval of 0.45 cM around the gene flanked by the SSR markers swm13 and gwm533 at the subtelomeric end of chromosome 3BS.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>24553966</pmid><doi>10.1007/s00122-014-2285-z</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0002-3094-7129</orcidid><oa>free_for_read</oa></addata></record>
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language eng
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source MEDLINE; Springer Nature - Complete Springer Journals
subjects Agricultural research
Agriculture
bacterial artificial chromosomes
Basidiomycota
Biochemistry
Biomedical and Life Sciences
Biotechnology
Chromosome Mapping
Chromosomes
Chromosomes, Plant
clones
Cloning
Disease Resistance - genetics
Diseases and pests
Environmental Sciences
Gene expression
Genes
Genes, Plant
Genetic aspects
Genetic Markers
Genetic research
Health aspects
leaf rust
Life Sciences
mature plants
mechanism of action
microsatellite repeats
molecular cloning
Original Paper
Plant Biochemistry
Plant Breeding/Biotechnology
Plant Diseases - microbiology
Plant Genetics and Genomics
Plant immunology
Plant resistance
Rust fungi
seedlings
Triticum - genetics
Triticum - microbiology
Triticum aestivum
Vegetal Biology
Wheat
title Fine mapping of LrSV2, a race-specific adult plant leaf rust resistance gene on wheat chromosome 3BS
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