The impact of transposable elements on the structure, evolution and function of the rice genome
Transposable elements (TEs) are ubiquitous in plants and are the primary genomic component of the majority of taxa. Knowledge of their impact on the structure, function and evolution of plant genomes is therefore a priority in the field of genomics. Rice, as one of the most prevalent crops for food...
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| Veröffentlicht in: | The New phytologist 2020-04, Vol.226 (1), p.44-49 |
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| container_title | The New phytologist |
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| creator | Akakpo, Roland Carpentier, Marie-Christine Hsing, Yue Ie Panaud, Olivier |
| description | Transposable elements (TEs) are ubiquitous in plants and are the primary genomic component of the majority of taxa. Knowledge of their impact on the structure, function and evolution of plant genomes is therefore a priority in the field of genomics. Rice, as one of the most prevalent crops for food security worldwide, has been subjected to intense research efforts over recent decades. Consequently, a considerable amount of genomic resources has been generated and made freely available to the scientific community. These can be exploited both to improve our understanding of some basic aspects of genome biology of this species and to develop new concepts for crop improvement. In this review, we describe the current knowledge on how TEs have shaped rice chromosomes and propose a new strategy based on a genome-wide association study (GWAS) to address the important question of their functional impact on this crop. |
| doi_str_mv | 10.1111/nph.16356 |
| format | Article |
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Knowledge of their impact on the structure, function and evolution of plant genomes is therefore a priority in the field of genomics. Rice, as one of the most prevalent crops for food security worldwide, has been subjected to intense research efforts over recent decades. Consequently, a considerable amount of genomic resources has been generated and made freely available to the scientific community. These can be exploited both to improve our understanding of some basic aspects of genome biology of this species and to develop new concepts for crop improvement. 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Knowledge of their impact on the structure, function and evolution of plant genomes is therefore a priority in the field of genomics. Rice, as one of the most prevalent crops for food security worldwide, has been subjected to intense research efforts over recent decades. Consequently, a considerable amount of genomic resources has been generated and made freely available to the scientific community. These can be exploited both to improve our understanding of some basic aspects of genome biology of this species and to develop new concepts for crop improvement. 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| source | Wiley-Blackwell Journals; MEDLINE; Wiley Online Library Journals; JSTOR; EZB Electronic Journals Library |
| subjects | Biology Chromosomes Crop improvement DNA Transposable Elements - genetics Evolution Evolution, Molecular Food security functional genomics Genome, Plant - genetics Genome-wide association studies Genome-Wide Association Study Genomes Genomics Life Sciences model crop species Oryza - genetics Rice Structure-function relationships Tansley insight transposable elements (TEs) |
| title | The impact of transposable elements on the structure, evolution and function of the rice genome |
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