Colonization history of the western corn rootworm (Diabrotica virgifera virgifera) in North America: insights from random forest ABC using microsatellite data
First described from western Kansas, USA, the western corn rootworm, Diabrotica virgifera virgifera , is one of the worst pests of maize. The species is generally thought to be of Mexican origin and to have incidentally followed the expansion of maize cultivation into North America thousands of year...
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Veröffentlicht in: | Biological invasions 2018-03, Vol.20 (3), p.665-677 |
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creator | Lombaert, Eric Ciosi, Marc Miller, Nicholas J. Sappington, Thomas W. Blin, Aurélie Guillemaud, Thomas |
description | First described from western Kansas, USA, the western corn rootworm,
Diabrotica virgifera virgifera
, is one of the worst pests of maize. The species is generally thought to be of Mexican origin and to have incidentally followed the expansion of maize cultivation into North America thousands of years ago. However, this hypothesis has never been investigated formally. In this study, the genetic variability of samples collected throughout North America was analysed at 13 microsatellite marker loci to explore precisely the population genetic structure and colonization history of
D. v. virgifera
. In particular, we used up-to-date approximate Bayesian computation methods based on random forest algorithms to test a Mexican versus a central-USA origin of the species, and to compare various possible timings of colonization. This analysis provided strong evidence that the origin of
D. v. virgifera
was southern (Mexico, or even further south). Surprisingly, we also found that the expansion of the species north of its origin was recent—probably not before 1100 years ago—thus indicating it was not directly associated with the early history of maize expansion out of Mexico, a far more ancient event. |
doi_str_mv | 10.1007/s10530-017-1566-2 |
format | Article |
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Diabrotica virgifera virgifera
, is one of the worst pests of maize. The species is generally thought to be of Mexican origin and to have incidentally followed the expansion of maize cultivation into North America thousands of years ago. However, this hypothesis has never been investigated formally. In this study, the genetic variability of samples collected throughout North America was analysed at 13 microsatellite marker loci to explore precisely the population genetic structure and colonization history of
D. v. virgifera
. In particular, we used up-to-date approximate Bayesian computation methods based on random forest algorithms to test a Mexican versus a central-USA origin of the species, and to compare various possible timings of colonization. This analysis provided strong evidence that the origin of
D. v. virgifera
was southern (Mexico, or even further south). Surprisingly, we also found that the expansion of the species north of its origin was recent—probably not before 1100 years ago—thus indicating it was not directly associated with the early history of maize expansion out of Mexico, a far more ancient event.</description><identifier>ISSN: 1387-3547</identifier><identifier>EISSN: 1573-1464</identifier><identifier>DOI: 10.1007/s10530-017-1566-2</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Approximation ; Bayesian analysis ; Biodiversity ; Biomedical and Life Sciences ; Colonization ; Corn ; Cultivation ; Developmental Biology ; Diabrotica virgifera virgifera ; Ecology ; Freshwater & Marine Ecology ; Genetic markers ; Genetic structure ; Genetic variability ; Life Sciences ; Microsatellites ; Original Paper ; Pests ; Plant Sciences ; Population genetics ; Populations and Evolution ; Species</subject><ispartof>Biological invasions, 2018-03, Vol.20 (3), p.665-677</ispartof><rights>Springer International Publishing AG 2017</rights><rights>Biological Invasions is a copyright of Springer, (2017). All Rights Reserved.</rights><rights>Copyright</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c393t-c4adcc6c84b0ea245d6539aaa3b6cc8c957ed0155f1539174ceab785506f59543</citedby><cites>FETCH-LOGICAL-c393t-c4adcc6c84b0ea245d6539aaa3b6cc8c957ed0155f1539174ceab785506f59543</cites><orcidid>0000-0003-0949-6690 ; 0000-0003-0451-1644</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10530-017-1566-2$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10530-017-1566-2$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,778,782,883,27907,27908,41471,42540,51302</link.rule.ids><backlink>$$Uhttps://hal.science/hal-02370096$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Lombaert, Eric</creatorcontrib><creatorcontrib>Ciosi, Marc</creatorcontrib><creatorcontrib>Miller, Nicholas J.</creatorcontrib><creatorcontrib>Sappington, Thomas W.</creatorcontrib><creatorcontrib>Blin, Aurélie</creatorcontrib><creatorcontrib>Guillemaud, Thomas</creatorcontrib><title>Colonization history of the western corn rootworm (Diabrotica virgifera virgifera) in North America: insights from random forest ABC using microsatellite data</title><title>Biological invasions</title><addtitle>Biol Invasions</addtitle><description>First described from western Kansas, USA, the western corn rootworm,
Diabrotica virgifera virgifera
, is one of the worst pests of maize. The species is generally thought to be of Mexican origin and to have incidentally followed the expansion of maize cultivation into North America thousands of years ago. However, this hypothesis has never been investigated formally. In this study, the genetic variability of samples collected throughout North America was analysed at 13 microsatellite marker loci to explore precisely the population genetic structure and colonization history of
D. v. virgifera
. In particular, we used up-to-date approximate Bayesian computation methods based on random forest algorithms to test a Mexican versus a central-USA origin of the species, and to compare various possible timings of colonization. This analysis provided strong evidence that the origin of
D. v. virgifera
was southern (Mexico, or even further south). Surprisingly, we also found that the expansion of the species north of its origin was recent—probably not before 1100 years ago—thus indicating it was not directly associated with the early history of maize expansion out of Mexico, a far more ancient event.</description><subject>Approximation</subject><subject>Bayesian analysis</subject><subject>Biodiversity</subject><subject>Biomedical and Life Sciences</subject><subject>Colonization</subject><subject>Corn</subject><subject>Cultivation</subject><subject>Developmental Biology</subject><subject>Diabrotica virgifera virgifera</subject><subject>Ecology</subject><subject>Freshwater & Marine Ecology</subject><subject>Genetic markers</subject><subject>Genetic structure</subject><subject>Genetic variability</subject><subject>Life Sciences</subject><subject>Microsatellites</subject><subject>Original Paper</subject><subject>Pests</subject><subject>Plant Sciences</subject><subject>Population genetics</subject><subject>Populations and Evolution</subject><subject>Species</subject><issn>1387-3547</issn><issn>1573-1464</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kc9u1DAQxiMEEqXwANwscaGHFDuO7Q237UL_SCu4tGdr1nE2rpJMGXtblYfhWesoCHrpxTP69Ps-eWaK4qPgp4Jz8yUKriQvuTClUFqX1aviSCgjS1Hr-nXu5cqUUtXmbfEuxlvOeWO4Oir-bHDAKfyGFHBifYgJ6ZFhx1Lv2YOPydPEHOaHENMD0sg-fwuwI0zBAbsPtA-dp2fdCQsT-4GUerYePWXqa1Zi2Pcpso5wZARTm0uHlPPZ-mzDDjFMezYGRxgh-WEIybMWErwv3nQwRP_hbz0ubs6_X28uy-3Pi6vNels62chUuhpa57Rb1TvuoapVq5VsAEDutHMr1yjjWy6U6kTWhamdh51ZKcV1pxpVy-PiZMntYbB3FEagR4sQ7OV6a2eNV9Lknel7kdlPC3tH-OuQR7C3eKApf89Wef9SSS1nSizUPFMk3_2LFdzOJ7PLyWy22PlktsqeavHEzE57T_-TXzY9Aes9m2Y</recordid><startdate>20180301</startdate><enddate>20180301</enddate><creator>Lombaert, Eric</creator><creator>Ciosi, Marc</creator><creator>Miller, Nicholas J.</creator><creator>Sappington, Thomas W.</creator><creator>Blin, Aurélie</creator><creator>Guillemaud, Thomas</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><general>Springer Verlag</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SN</scope><scope>7SS</scope><scope>88A</scope><scope>8AO</scope><scope>8C1</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>1XC</scope><scope>VOOES</scope><orcidid>https://orcid.org/0000-0003-0949-6690</orcidid><orcidid>https://orcid.org/0000-0003-0451-1644</orcidid></search><sort><creationdate>20180301</creationdate><title>Colonization history of the western corn rootworm (Diabrotica virgifera virgifera) in North America: insights from random forest ABC using microsatellite data</title><author>Lombaert, Eric ; Ciosi, Marc ; Miller, Nicholas J. ; Sappington, Thomas W. ; Blin, Aurélie ; Guillemaud, Thomas</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c393t-c4adcc6c84b0ea245d6539aaa3b6cc8c957ed0155f1539174ceab785506f59543</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Approximation</topic><topic>Bayesian analysis</topic><topic>Biodiversity</topic><topic>Biomedical and Life Sciences</topic><topic>Colonization</topic><topic>Corn</topic><topic>Cultivation</topic><topic>Developmental Biology</topic><topic>Diabrotica virgifera virgifera</topic><topic>Ecology</topic><topic>Freshwater & Marine Ecology</topic><topic>Genetic markers</topic><topic>Genetic structure</topic><topic>Genetic variability</topic><topic>Life Sciences</topic><topic>Microsatellites</topic><topic>Original Paper</topic><topic>Pests</topic><topic>Plant Sciences</topic><topic>Population genetics</topic><topic>Populations and Evolution</topic><topic>Species</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lombaert, Eric</creatorcontrib><creatorcontrib>Ciosi, Marc</creatorcontrib><creatorcontrib>Miller, Nicholas J.</creatorcontrib><creatorcontrib>Sappington, Thomas W.</creatorcontrib><creatorcontrib>Blin, Aurélie</creatorcontrib><creatorcontrib>Guillemaud, Thomas</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Biology Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection (ProQuest)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><jtitle>Biological invasions</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lombaert, Eric</au><au>Ciosi, Marc</au><au>Miller, Nicholas J.</au><au>Sappington, Thomas W.</au><au>Blin, Aurélie</au><au>Guillemaud, Thomas</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Colonization history of the western corn rootworm (Diabrotica virgifera virgifera) in North America: insights from random forest ABC using microsatellite data</atitle><jtitle>Biological invasions</jtitle><stitle>Biol Invasions</stitle><date>2018-03-01</date><risdate>2018</risdate><volume>20</volume><issue>3</issue><spage>665</spage><epage>677</epage><pages>665-677</pages><issn>1387-3547</issn><eissn>1573-1464</eissn><abstract>First described from western Kansas, USA, the western corn rootworm,
Diabrotica virgifera virgifera
, is one of the worst pests of maize. The species is generally thought to be of Mexican origin and to have incidentally followed the expansion of maize cultivation into North America thousands of years ago. However, this hypothesis has never been investigated formally. In this study, the genetic variability of samples collected throughout North America was analysed at 13 microsatellite marker loci to explore precisely the population genetic structure and colonization history of
D. v. virgifera
. In particular, we used up-to-date approximate Bayesian computation methods based on random forest algorithms to test a Mexican versus a central-USA origin of the species, and to compare various possible timings of colonization. This analysis provided strong evidence that the origin of
D. v. virgifera
was southern (Mexico, or even further south). Surprisingly, we also found that the expansion of the species north of its origin was recent—probably not before 1100 years ago—thus indicating it was not directly associated with the early history of maize expansion out of Mexico, a far more ancient event.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><doi>10.1007/s10530-017-1566-2</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0003-0949-6690</orcidid><orcidid>https://orcid.org/0000-0003-0451-1644</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Approximation Bayesian analysis Biodiversity Biomedical and Life Sciences Colonization Corn Cultivation Developmental Biology Diabrotica virgifera virgifera Ecology Freshwater & Marine Ecology Genetic markers Genetic structure Genetic variability Life Sciences Microsatellites Original Paper Pests Plant Sciences Population genetics Populations and Evolution Species |
title | Colonization history of the western corn rootworm (Diabrotica virgifera virgifera) in North America: insights from random forest ABC using microsatellite data |
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