Spatio-temporal population genetic structure, relative to demographic and ecological characteristics, in the freshwater snail Biomphalaria pfeifferi in Man, western Côte d’Ivoire
Combining the analysis of spatial and temporal variation when investigating population structure enhances our capacity for unravelling the biotic and abiotic factors responsible for microevolutionary change. This work aimed at measuring the spatial and temporal genetic structure of populations of th...
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Veröffentlicht in: | Genetica 2019-02, Vol.147 (1), p.33-45 |
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creator | Tian-Bi, Yves-Nathan T. Konan, Jean-Noël K. Sangaré, Abdourahamane Ortega-Abboud, Enrique Utzinger, Jürg N’Goran, Eliézer K. Jarne, Philippe |
description | Combining the analysis of spatial and temporal variation when investigating population structure enhances our capacity for unravelling the biotic and abiotic factors responsible for microevolutionary change. This work aimed at measuring the spatial and temporal genetic structure of populations of the freshwater snail
Biomphalaria pfeifferi
(the intermediate host of the trematode
Schistosoma mansoni
) in relation to the mating system (self-fertilization), demography, parasite prevalence and some ecological parameters. Snail populations were sampled four times in seven human-water contact sites in the Man region, western Côte d’Ivoire, and their variability was measured at five microsatellite loci. Limited genetic diversity and high selfing rates were observed in the populations studied. We failed to reveal an effect of demographic and ecological parameters on within-population diversity, perhaps as a result of a too small number of populations. A strong spatial genetic differentiation was detected among populations. The temporal differentiation within populations was high in most populations, though lower than the spatial differentiation. All estimates of effective population size were lower than seven suggesting a strong effect of genetic drift. However, the genetic drift was compensated by high gene flow. The genetic structure within and among populations reflected that observed in other selfing snail species, relying on high selfing rates, low effective population sizes, environmental stochasticity and high gene flow. |
doi_str_mv | 10.1007/s10709-018-0049-4 |
format | Article |
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Biomphalaria pfeifferi
(the intermediate host of the trematode
Schistosoma mansoni
) in relation to the mating system (self-fertilization), demography, parasite prevalence and some ecological parameters. Snail populations were sampled four times in seven human-water contact sites in the Man region, western Côte d’Ivoire, and their variability was measured at five microsatellite loci. Limited genetic diversity and high selfing rates were observed in the populations studied. We failed to reveal an effect of demographic and ecological parameters on within-population diversity, perhaps as a result of a too small number of populations. A strong spatial genetic differentiation was detected among populations. The temporal differentiation within populations was high in most populations, though lower than the spatial differentiation. All estimates of effective population size were lower than seven suggesting a strong effect of genetic drift. However, the genetic drift was compensated by high gene flow. The genetic structure within and among populations reflected that observed in other selfing snail species, relying on high selfing rates, low effective population sizes, environmental stochasticity and high gene flow.</description><identifier>ISSN: 0016-6707</identifier><identifier>EISSN: 1573-6857</identifier><identifier>DOI: 10.1007/s10709-018-0049-4</identifier><identifier>PMID: 30498954</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Abiotic factors ; Animal Genetics and Genomics ; Animals ; Biodiversity ; Biodiversity and Ecology ; Biomedical and Life Sciences ; Biomphalaria ; Demographics ; Demography ; Differentiation ; Ecological effects ; Ecological monitoring ; Ecosystem ; Environmental Sciences ; Evolutionary Biology ; Fertilization ; Fresh Water ; Gene Flow ; Genetic diversity ; Genetic Drift ; Genetic Speciation ; Genetic structure ; Human Genetics ; Life Sciences ; Microbial Genetics and Genomics ; Original Paper ; Parameters ; Parasites ; Plant Genetics and Genomics ; Polymorphism, Genetic ; Population ; Population genetics ; Population number ; Population structure ; Population studies ; Populations ; Self-fertilization ; Snails - genetics ; Spatial analysis ; Stochasticity ; Temporal variations</subject><ispartof>Genetica, 2019-02, Vol.147 (1), p.33-45</ispartof><rights>Springer Nature Switzerland AG 2018</rights><rights>Genetica is a copyright of Springer, (2018). All Rights Reserved.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3644-5bab35ef83848ff8a7531b96f0b4aafa4277b5dd3d1224aff1cc82c45b5849813</citedby><cites>FETCH-LOGICAL-c3644-5bab35ef83848ff8a7531b96f0b4aafa4277b5dd3d1224aff1cc82c45b5849813</cites><orcidid>0000-0001-6885-0798 ; 0000-0002-0460-9441 ; 0000-0002-6291-1999</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10709-018-0049-4$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10709-018-0049-4$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,780,784,885,27915,27916,41479,42548,51310</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30498954$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-02366851$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Tian-Bi, Yves-Nathan T.</creatorcontrib><creatorcontrib>Konan, Jean-Noël K.</creatorcontrib><creatorcontrib>Sangaré, Abdourahamane</creatorcontrib><creatorcontrib>Ortega-Abboud, Enrique</creatorcontrib><creatorcontrib>Utzinger, Jürg</creatorcontrib><creatorcontrib>N’Goran, Eliézer K.</creatorcontrib><creatorcontrib>Jarne, Philippe</creatorcontrib><title>Spatio-temporal population genetic structure, relative to demographic and ecological characteristics, in the freshwater snail Biomphalaria pfeifferi in Man, western Côte d’Ivoire</title><title>Genetica</title><addtitle>Genetica</addtitle><addtitle>Genetica</addtitle><description>Combining the analysis of spatial and temporal variation when investigating population structure enhances our capacity for unravelling the biotic and abiotic factors responsible for microevolutionary change. This work aimed at measuring the spatial and temporal genetic structure of populations of the freshwater snail
Biomphalaria pfeifferi
(the intermediate host of the trematode
Schistosoma mansoni
) in relation to the mating system (self-fertilization), demography, parasite prevalence and some ecological parameters. Snail populations were sampled four times in seven human-water contact sites in the Man region, western Côte d’Ivoire, and their variability was measured at five microsatellite loci. Limited genetic diversity and high selfing rates were observed in the populations studied. We failed to reveal an effect of demographic and ecological parameters on within-population diversity, perhaps as a result of a too small number of populations. A strong spatial genetic differentiation was detected among populations. The temporal differentiation within populations was high in most populations, though lower than the spatial differentiation. All estimates of effective population size were lower than seven suggesting a strong effect of genetic drift. However, the genetic drift was compensated by high gene flow. The genetic structure within and among populations reflected that observed in other selfing snail species, relying on high selfing rates, low effective population sizes, environmental stochasticity and high gene flow.</description><subject>Abiotic factors</subject><subject>Animal Genetics and Genomics</subject><subject>Animals</subject><subject>Biodiversity</subject><subject>Biodiversity and Ecology</subject><subject>Biomedical and Life Sciences</subject><subject>Biomphalaria</subject><subject>Demographics</subject><subject>Demography</subject><subject>Differentiation</subject><subject>Ecological effects</subject><subject>Ecological monitoring</subject><subject>Ecosystem</subject><subject>Environmental Sciences</subject><subject>Evolutionary Biology</subject><subject>Fertilization</subject><subject>Fresh Water</subject><subject>Gene Flow</subject><subject>Genetic diversity</subject><subject>Genetic Drift</subject><subject>Genetic Speciation</subject><subject>Genetic structure</subject><subject>Human Genetics</subject><subject>Life Sciences</subject><subject>Microbial Genetics and Genomics</subject><subject>Original Paper</subject><subject>Parameters</subject><subject>Parasites</subject><subject>Plant Genetics and Genomics</subject><subject>Polymorphism, Genetic</subject><subject>Population</subject><subject>Population genetics</subject><subject>Population number</subject><subject>Population structure</subject><subject>Population studies</subject><subject>Populations</subject><subject>Self-fertilization</subject><subject>Snails - genetics</subject><subject>Spatial analysis</subject><subject>Stochasticity</subject><subject>Temporal variations</subject><issn>0016-6707</issn><issn>1573-6857</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1ks-K1TAUxosoznX0AdxIwI3CrSZN2rTL8aLOwBUX6jqcpie3GdqmJu0d3Pka7nwI8QH0TXwSUzqOILgKnPM7X86fL0keMvqMUSqfB0YlrVLKypRSUaXiVrJhueRpUebydrKhlBVpIak8Se6FcEkprWRR3U1OeKTLKheb5Pu7ESbr0gn70XnoyOjGuVtCAznggJPVJEx-1tPscUs8LrkjksmRBnt38DC2EYGhIahd5w5WRxHdggc9obchCoQtsQOZWiTGY2ivICZIGMB25IV1_dhCB94CGQ1aY2LRj6-RfwPDllxhiPBAdj-_TUiaX5-_XByd9Xg_uWOgC_jg-j1NPrx6-X53nu7fvr7Yne1TzQsh0ryGmudoSl6K0pgSZM5ZXRWG1gLAgMikrPOm4Q3LMgHGMK3LTIu8zsu4IcZPk6erbuxRjd724D8pB1adn-3VEqMZL-K22XFhn6zs6N3HOTauehs0dh0M6OagMiYYFTKeI6KP_0Ev3eyHOEmkeMULnlciUmyltHcheDQ3HTCqFgOo1QAqGkAtBlBLzaNr5bnusbmp-HPxCGQrEGJqOKD_-_X_VX8DUSzAuw</recordid><startdate>201902</startdate><enddate>201902</enddate><creator>Tian-Bi, Yves-Nathan T.</creator><creator>Konan, Jean-Noël K.</creator><creator>Sangaré, Abdourahamane</creator><creator>Ortega-Abboud, Enrique</creator><creator>Utzinger, Jürg</creator><creator>N’Goran, Eliézer K.</creator><creator>Jarne, Philippe</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><general>Springer Verlag</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7SN</scope><scope>7SS</scope><scope>7T7</scope><scope>7TK</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope><orcidid>https://orcid.org/0000-0001-6885-0798</orcidid><orcidid>https://orcid.org/0000-0002-0460-9441</orcidid><orcidid>https://orcid.org/0000-0002-6291-1999</orcidid></search><sort><creationdate>201902</creationdate><title>Spatio-temporal population genetic structure, relative to demographic and ecological characteristics, in the freshwater snail Biomphalaria pfeifferi in Man, western Côte d’Ivoire</title><author>Tian-Bi, Yves-Nathan T. ; Konan, Jean-Noël K. ; Sangaré, Abdourahamane ; Ortega-Abboud, Enrique ; Utzinger, Jürg ; N’Goran, Eliézer K. ; Jarne, Philippe</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3644-5bab35ef83848ff8a7531b96f0b4aafa4277b5dd3d1224aff1cc82c45b5849813</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Abiotic factors</topic><topic>Animal Genetics and Genomics</topic><topic>Animals</topic><topic>Biodiversity</topic><topic>Biodiversity and Ecology</topic><topic>Biomedical and Life Sciences</topic><topic>Biomphalaria</topic><topic>Demographics</topic><topic>Demography</topic><topic>Differentiation</topic><topic>Ecological effects</topic><topic>Ecological monitoring</topic><topic>Ecosystem</topic><topic>Environmental Sciences</topic><topic>Evolutionary Biology</topic><topic>Fertilization</topic><topic>Fresh Water</topic><topic>Gene Flow</topic><topic>Genetic diversity</topic><topic>Genetic Drift</topic><topic>Genetic Speciation</topic><topic>Genetic structure</topic><topic>Human Genetics</topic><topic>Life Sciences</topic><topic>Microbial Genetics and Genomics</topic><topic>Original Paper</topic><topic>Parameters</topic><topic>Parasites</topic><topic>Plant Genetics and Genomics</topic><topic>Polymorphism, Genetic</topic><topic>Population</topic><topic>Population genetics</topic><topic>Population number</topic><topic>Population structure</topic><topic>Population studies</topic><topic>Populations</topic><topic>Self-fertilization</topic><topic>Snails - 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Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><jtitle>Genetica</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tian-Bi, Yves-Nathan T.</au><au>Konan, Jean-Noël K.</au><au>Sangaré, Abdourahamane</au><au>Ortega-Abboud, Enrique</au><au>Utzinger, Jürg</au><au>N’Goran, Eliézer K.</au><au>Jarne, Philippe</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Spatio-temporal population genetic structure, relative to demographic and ecological characteristics, in the freshwater snail Biomphalaria pfeifferi in Man, western Côte d’Ivoire</atitle><jtitle>Genetica</jtitle><stitle>Genetica</stitle><addtitle>Genetica</addtitle><date>2019-02</date><risdate>2019</risdate><volume>147</volume><issue>1</issue><spage>33</spage><epage>45</epage><pages>33-45</pages><issn>0016-6707</issn><eissn>1573-6857</eissn><abstract>Combining the analysis of spatial and temporal variation when investigating population structure enhances our capacity for unravelling the biotic and abiotic factors responsible for microevolutionary change. This work aimed at measuring the spatial and temporal genetic structure of populations of the freshwater snail
Biomphalaria pfeifferi
(the intermediate host of the trematode
Schistosoma mansoni
) in relation to the mating system (self-fertilization), demography, parasite prevalence and some ecological parameters. Snail populations were sampled four times in seven human-water contact sites in the Man region, western Côte d’Ivoire, and their variability was measured at five microsatellite loci. Limited genetic diversity and high selfing rates were observed in the populations studied. We failed to reveal an effect of demographic and ecological parameters on within-population diversity, perhaps as a result of a too small number of populations. A strong spatial genetic differentiation was detected among populations. The temporal differentiation within populations was high in most populations, though lower than the spatial differentiation. All estimates of effective population size were lower than seven suggesting a strong effect of genetic drift. However, the genetic drift was compensated by high gene flow. The genetic structure within and among populations reflected that observed in other selfing snail species, relying on high selfing rates, low effective population sizes, environmental stochasticity and high gene flow.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><pmid>30498954</pmid><doi>10.1007/s10709-018-0049-4</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0001-6885-0798</orcidid><orcidid>https://orcid.org/0000-0002-0460-9441</orcidid><orcidid>https://orcid.org/0000-0002-6291-1999</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Abiotic factors Animal Genetics and Genomics Animals Biodiversity Biodiversity and Ecology Biomedical and Life Sciences Biomphalaria Demographics Demography Differentiation Ecological effects Ecological monitoring Ecosystem Environmental Sciences Evolutionary Biology Fertilization Fresh Water Gene Flow Genetic diversity Genetic Drift Genetic Speciation Genetic structure Human Genetics Life Sciences Microbial Genetics and Genomics Original Paper Parameters Parasites Plant Genetics and Genomics Polymorphism, Genetic Population Population genetics Population number Population structure Population studies Populations Self-fertilization Snails - genetics Spatial analysis Stochasticity Temporal variations |
title | Spatio-temporal population genetic structure, relative to demographic and ecological characteristics, in the freshwater snail Biomphalaria pfeifferi in Man, western Côte d’Ivoire |
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