The infinitesimal model: Definition, derivation, and implications
Our focus here is on the infinitesimal model. In this model, one or several quantitative traits are described as the sum of a genetic and a non-genetic component, the first being distributed within families as a normal random variable centred at the average of the parental genetic components, and wi...
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Veröffentlicht in: | Theoretical population biology 2017-12, Vol.118, p.50-73 |
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description | Our focus here is on the infinitesimal model. In this model, one or several quantitative traits are described as the sum of a genetic and a non-genetic component, the first being distributed within families as a normal random variable centred at the average of the parental genetic components, and with a variance independent of the parental traits. Thus, the variance that segregates within families is not perturbed by selection, and can be predicted from the variance components. This does not necessarily imply that the trait distribution across the whole population should be Gaussian, and indeed selection or population structure may have a substantial effect on the overall trait distribution. One of our main aims is to identify some general conditions on the allelic effects for the infinitesimal model to be accurate. We first review the long history of the infinitesimal model in quantitative genetics. Then we formulate the model at the phenotypic level in terms of individual trait values and relationships between individuals, but including different evolutionary processes: genetic drift, recombination, selection, mutation, population structure, …. We give a range of examples of its application to evolutionary questions related to stabilising selection, assortative mating, effective population size and response to selection, habitat preference and speciation. We provide a mathematical justification of the model as the limit as the number M of underlying loci tends to infinity of a model with Mendelian inheritance, mutation and environmental noise, when the genetic component of the trait is purely additive. We also show how the model generalises to include epistatic effects. We prove in particular that, within each family, the genetic components of the individual trait values in the current generation are indeed normally distributed with a variance independent of ancestral traits, up to an error of order 1∕M. Simulations suggest that in some cases the convergence may be as fast as 1∕M. |
doi_str_mv | 10.1016/j.tpb.2017.06.001 |
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In this model, one or several quantitative traits are described as the sum of a genetic and a non-genetic component, the first being distributed within families as a normal random variable centred at the average of the parental genetic components, and with a variance independent of the parental traits. Thus, the variance that segregates within families is not perturbed by selection, and can be predicted from the variance components. This does not necessarily imply that the trait distribution across the whole population should be Gaussian, and indeed selection or population structure may have a substantial effect on the overall trait distribution. One of our main aims is to identify some general conditions on the allelic effects for the infinitesimal model to be accurate. We first review the long history of the infinitesimal model in quantitative genetics. Then we formulate the model at the phenotypic level in terms of individual trait values and relationships between individuals, but including different evolutionary processes: genetic drift, recombination, selection, mutation, population structure, …. We give a range of examples of its application to evolutionary questions related to stabilising selection, assortative mating, effective population size and response to selection, habitat preference and speciation. We provide a mathematical justification of the model as the limit as the number M of underlying loci tends to infinity of a model with Mendelian inheritance, mutation and environmental noise, when the genetic component of the trait is purely additive. We also show how the model generalises to include epistatic effects. We prove in particular that, within each family, the genetic components of the individual trait values in the current generation are indeed normally distributed with a variance independent of ancestral traits, up to an error of order 1∕M. 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All rights reserved.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c430t-ba3019e7e13add932a5215a1ac0e18f77434a1bf7d5b79683c7fd00af1675ff33</citedby><cites>FETCH-LOGICAL-c430t-ba3019e7e13add932a5215a1ac0e18f77434a1bf7d5b79683c7fd00af1675ff33</cites><orcidid>0000-0003-4464-015X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.tpb.2017.06.001$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>230,314,780,784,885,3548,27923,27924,45994</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28709925$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-02113158$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Barton, N.H.</creatorcontrib><creatorcontrib>Etheridge, A.M.</creatorcontrib><creatorcontrib>Véber, A.</creatorcontrib><title>The infinitesimal model: Definition, derivation, and implications</title><title>Theoretical population biology</title><addtitle>Theor Popul Biol</addtitle><description>Our focus here is on the infinitesimal model. In this model, one or several quantitative traits are described as the sum of a genetic and a non-genetic component, the first being distributed within families as a normal random variable centred at the average of the parental genetic components, and with a variance independent of the parental traits. Thus, the variance that segregates within families is not perturbed by selection, and can be predicted from the variance components. This does not necessarily imply that the trait distribution across the whole population should be Gaussian, and indeed selection or population structure may have a substantial effect on the overall trait distribution. One of our main aims is to identify some general conditions on the allelic effects for the infinitesimal model to be accurate. We first review the long history of the infinitesimal model in quantitative genetics. Then we formulate the model at the phenotypic level in terms of individual trait values and relationships between individuals, but including different evolutionary processes: genetic drift, recombination, selection, mutation, population structure, …. We give a range of examples of its application to evolutionary questions related to stabilising selection, assortative mating, effective population size and response to selection, habitat preference and speciation. We provide a mathematical justification of the model as the limit as the number M of underlying loci tends to infinity of a model with Mendelian inheritance, mutation and environmental noise, when the genetic component of the trait is purely additive. We also show how the model generalises to include epistatic effects. We prove in particular that, within each family, the genetic components of the individual trait values in the current generation are indeed normally distributed with a variance independent of ancestral traits, up to an error of order 1∕M. Simulations suggest that in some cases the convergence may be as fast as 1∕M.</description><subject>Biological Evolution</subject><subject>Diploidy</subject><subject>Epistasis</subject><subject>Epistasis, Genetic</subject><subject>Genetics</subject><subject>Haploidy</subject><subject>Humans</subject><subject>Infinitesimal model</subject><subject>Life Sciences</subject><subject>Mathematics</subject><subject>Models, Genetic</subject><subject>Mutation</subject><subject>Populations and Evolution</subject><subject>Probability</subject><subject>Quantitative genetics</subject><subject>Selection</subject><subject>Selection, Genetic</subject><subject>Wills</subject><issn>0040-5809</issn><issn>1096-0325</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kE1LxDAQhoMoun78AC_So4KtM03bNHpa_IYFL3oOaTLBLP1Ym-6C_96uVY-eZnh55mV4GDtFSBCwuFomw6pKUkCRQJEA4A6bIcgiBp7mu2wGkEGclyAP2GEISwAokfN9dpCWAqRM8xmbv75T5FvnWz9Q8I2uo6azVF9Hd_Qd-q69jCz1fqOnXbc28s2q9uY7CMdsz-k60MnPPGJvD_evt0_x4uXx-Xa-iE3GYYgrzQElCUKurZU81XmKuUZtgLB0QmQ801g5YfNKyKLkRjgLoB0WIneO8yN2MfW-61qt-vHV_lN12qun-UJtM0gROeblBkf2fGJXffexpjCoxgdDda1b6tZBoRylyUwW21qcUNN3IfTk_roR1NayWqrRstpaVlCo0fJ4c_ZTv64asn8Xv1pH4GYCaBSy8dSrYDy1hqzvyQzKdv6f-i-S5YuM</recordid><startdate>20171201</startdate><enddate>20171201</enddate><creator>Barton, N.H.</creator><creator>Etheridge, A.M.</creator><creator>Véber, A.</creator><general>Elsevier Inc</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope><orcidid>https://orcid.org/0000-0003-4464-015X</orcidid></search><sort><creationdate>20171201</creationdate><title>The infinitesimal model: Definition, derivation, and implications</title><author>Barton, N.H. ; Etheridge, A.M. ; Véber, A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c430t-ba3019e7e13add932a5215a1ac0e18f77434a1bf7d5b79683c7fd00af1675ff33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Biological Evolution</topic><topic>Diploidy</topic><topic>Epistasis</topic><topic>Epistasis, Genetic</topic><topic>Genetics</topic><topic>Haploidy</topic><topic>Humans</topic><topic>Infinitesimal model</topic><topic>Life Sciences</topic><topic>Mathematics</topic><topic>Models, Genetic</topic><topic>Mutation</topic><topic>Populations and Evolution</topic><topic>Probability</topic><topic>Quantitative genetics</topic><topic>Selection</topic><topic>Selection, Genetic</topic><topic>Wills</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Barton, N.H.</creatorcontrib><creatorcontrib>Etheridge, A.M.</creatorcontrib><creatorcontrib>Véber, A.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><jtitle>Theoretical population biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Barton, N.H.</au><au>Etheridge, A.M.</au><au>Véber, A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The infinitesimal model: Definition, derivation, and implications</atitle><jtitle>Theoretical population biology</jtitle><addtitle>Theor Popul Biol</addtitle><date>2017-12-01</date><risdate>2017</risdate><volume>118</volume><spage>50</spage><epage>73</epage><pages>50-73</pages><issn>0040-5809</issn><eissn>1096-0325</eissn><abstract>Our focus here is on the infinitesimal model. In this model, one or several quantitative traits are described as the sum of a genetic and a non-genetic component, the first being distributed within families as a normal random variable centred at the average of the parental genetic components, and with a variance independent of the parental traits. Thus, the variance that segregates within families is not perturbed by selection, and can be predicted from the variance components. This does not necessarily imply that the trait distribution across the whole population should be Gaussian, and indeed selection or population structure may have a substantial effect on the overall trait distribution. One of our main aims is to identify some general conditions on the allelic effects for the infinitesimal model to be accurate. We first review the long history of the infinitesimal model in quantitative genetics. Then we formulate the model at the phenotypic level in terms of individual trait values and relationships between individuals, but including different evolutionary processes: genetic drift, recombination, selection, mutation, population structure, …. We give a range of examples of its application to evolutionary questions related to stabilising selection, assortative mating, effective population size and response to selection, habitat preference and speciation. We provide a mathematical justification of the model as the limit as the number M of underlying loci tends to infinity of a model with Mendelian inheritance, mutation and environmental noise, when the genetic component of the trait is purely additive. We also show how the model generalises to include epistatic effects. We prove in particular that, within each family, the genetic components of the individual trait values in the current generation are indeed normally distributed with a variance independent of ancestral traits, up to an error of order 1∕M. Simulations suggest that in some cases the convergence may be as fast as 1∕M.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>28709925</pmid><doi>10.1016/j.tpb.2017.06.001</doi><tpages>24</tpages><orcidid>https://orcid.org/0000-0003-4464-015X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Biological Evolution Diploidy Epistasis Epistasis, Genetic Genetics Haploidy Humans Infinitesimal model Life Sciences Mathematics Models, Genetic Mutation Populations and Evolution Probability Quantitative genetics Selection Selection, Genetic Wills |
title | The infinitesimal model: Definition, derivation, and implications |
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