Use of Biocides for the Control of Fungal Outbreaks in Subterranean Environments: The Case of the Lascaux Cave in France
The Lascaux Cave in France suffered an outbreak of the fungus Fusarium solani in 2001. Biocides were applied for three years to control this outbreak. Four months after the initial biocide application, a new outbreak appeared in the form of black stains that progressively invaded the cave. The black...
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description | The Lascaux Cave in France suffered an outbreak of the fungus Fusarium solani in 2001. Biocides were applied for three years to control this outbreak. Four months after the initial biocide application, a new outbreak appeared in the form of black stains that progressively invaded the cave. The black stains on the ceiling and passage banks were so evident by 2007 that they became one of the cave’s major problems. Therefore, biocides were used again in 2008. The present study investigated the fungal communities associated with the black stains and the effectiveness of the biocides applied, by using cloning, denaturing gradient gel electrophoresis, and culture-dependent methods. A novel species, Ochroconis lascauxensis, was the most abundant fungus in samples collected between 2007 and 2008, and the biocides applied were not effective in eliminating this fungus; on the contrary, they appeared to increase the fungal diversity. The fungal communities represented in the samples collected in 2010 were quite different from those collected in 2008 and 2009: the major OTUs corresponded to black yeasts belonging to the Herpotrichiellaceae family. The origin and evolution of these microorganisms are probably linked to the intensive biocide treatments and to the anthropogenic changes introduced by cave management. |
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Biocides were applied for three years to control this outbreak. Four months after the initial biocide application, a new outbreak appeared in the form of black stains that progressively invaded the cave. The black stains on the ceiling and passage banks were so evident by 2007 that they became one of the cave’s major problems. Therefore, biocides were used again in 2008. The present study investigated the fungal communities associated with the black stains and the effectiveness of the biocides applied, by using cloning, denaturing gradient gel electrophoresis, and culture-dependent methods. A novel species, Ochroconis lascauxensis, was the most abundant fungus in samples collected between 2007 and 2008, and the biocides applied were not effective in eliminating this fungus; on the contrary, they appeared to increase the fungal diversity. The fungal communities represented in the samples collected in 2010 were quite different from those collected in 2008 and 2009: the major OTUs corresponded to black yeasts belonging to the Herpotrichiellaceae family. The origin and evolution of these microorganisms are probably linked to the intensive biocide treatments and to the anthropogenic changes introduced by cave management.</description><identifier>ISSN: 0013-936X</identifier><identifier>EISSN: 1520-5851</identifier><identifier>DOI: 10.1021/es2040625</identifier><identifier>PMID: 22380699</identifier><identifier>CODEN: ESTHAG</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Caves ; Caves - microbiology ; Denaturing Gradient Gel Electrophoresis ; Disease Outbreaks - prevention & control ; Disinfectants - pharmacology ; DNA, Ribosomal Spacer - genetics ; Epidemics ; France - epidemiology ; Fungi ; Fusarium - drug effects ; Fusarium - genetics ; Fusarium - isolation & purification ; Fusarium - metabolism ; Life Sciences ; Microbiology and Parasitology ; Molecular Sequence Data ; Mycology ; Mycoses - epidemiology ; Mycoses - microbiology ; Mycoses - prevention & control ; Phylogeny ; RNA, Ribosomal - genetics ; Studies ; Yeast</subject><ispartof>Environmental science & technology, 2012-04, Vol.46 (7), p.3762-3770</ispartof><rights>Copyright © 2012 American Chemical Society</rights><rights>Copyright American Chemical Society Apr 3, 2012</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a441t-8f85327d8c5e4c6145a682ebbfc429ab5d50c6bb6082798a8ca5ad6afed632833</citedby><cites>FETCH-LOGICAL-a441t-8f85327d8c5e4c6145a682ebbfc429ab5d50c6bb6082798a8ca5ad6afed632833</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/es2040625$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/es2040625$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>230,314,780,784,885,2765,27076,27924,27925,56738,56788</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22380699$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-01943043$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Martin-Sanchez, Pedro M</creatorcontrib><creatorcontrib>Nováková, Alena</creatorcontrib><creatorcontrib>Bastian, Fabiola</creatorcontrib><creatorcontrib>Alabouvette, Claude</creatorcontrib><creatorcontrib>Saiz-Jimenez, Cesareo</creatorcontrib><title>Use of Biocides for the Control of Fungal Outbreaks in Subterranean Environments: The Case of the Lascaux Cave in France</title><title>Environmental science & technology</title><addtitle>Environ. Sci. Technol</addtitle><description>The Lascaux Cave in France suffered an outbreak of the fungus Fusarium solani in 2001. Biocides were applied for three years to control this outbreak. Four months after the initial biocide application, a new outbreak appeared in the form of black stains that progressively invaded the cave. The black stains on the ceiling and passage banks were so evident by 2007 that they became one of the cave’s major problems. Therefore, biocides were used again in 2008. The present study investigated the fungal communities associated with the black stains and the effectiveness of the biocides applied, by using cloning, denaturing gradient gel electrophoresis, and culture-dependent methods. A novel species, Ochroconis lascauxensis, was the most abundant fungus in samples collected between 2007 and 2008, and the biocides applied were not effective in eliminating this fungus; on the contrary, they appeared to increase the fungal diversity. The fungal communities represented in the samples collected in 2010 were quite different from those collected in 2008 and 2009: the major OTUs corresponded to black yeasts belonging to the Herpotrichiellaceae family. The origin and evolution of these microorganisms are probably linked to the intensive biocide treatments and to the anthropogenic changes introduced by cave management.</description><subject>Caves</subject><subject>Caves - microbiology</subject><subject>Denaturing Gradient Gel Electrophoresis</subject><subject>Disease Outbreaks - prevention & control</subject><subject>Disinfectants - pharmacology</subject><subject>DNA, Ribosomal Spacer - genetics</subject><subject>Epidemics</subject><subject>France - epidemiology</subject><subject>Fungi</subject><subject>Fusarium - drug effects</subject><subject>Fusarium - genetics</subject><subject>Fusarium - isolation & purification</subject><subject>Fusarium - metabolism</subject><subject>Life Sciences</subject><subject>Microbiology and Parasitology</subject><subject>Molecular Sequence Data</subject><subject>Mycology</subject><subject>Mycoses - epidemiology</subject><subject>Mycoses - microbiology</subject><subject>Mycoses - prevention & control</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal - genetics</subject><subject>Studies</subject><subject>Yeast</subject><issn>0013-936X</issn><issn>1520-5851</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNplkV9rFDEUxYModlt98AtIEKT4MHrzdxPf6tK1wkIfbMG3cCeTsVNnkzaZWeq3d4atW9CnwM3vnHMvh5A3DD4y4OxTKBwkaK6ekQVTHCplFHtOFgBMVFboH0fkuJRbAOACzEtyxLkwoK1dkIfrEmhq6Zcu-a4JhbYp0-Em0FWKQ079_Lce40_s6eU41Dngr0K7SL-P9RByxhgw0vO463KK2xCH8plezWrc285OGywex4dptguzdD2pfHhFXrTYl_D68T0h1-vzq9VFtbn8-m11tqlQSjZUpjVK8GVjvArSayYVasNDXbdecou1ahR4XdcaDF9ag8ajwkZjGxotuBHihHzY-95g7-5yt8X82yXs3MXZxs0zYFYKkGLHJvZ0z97ldD-GMrhtV3zo--nMNBZnteSgYDm7vvuHvE1jjtMhzlo1ba44e4r2OZWSQ3vIZ-Dm4tyhuIl9-2g41tvQHMi_TU3A-z2AvjyF_W_0B3qknNM</recordid><startdate>20120403</startdate><enddate>20120403</enddate><creator>Martin-Sanchez, Pedro M</creator><creator>Nováková, Alena</creator><creator>Bastian, Fabiola</creator><creator>Alabouvette, Claude</creator><creator>Saiz-Jimenez, Cesareo</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7ST</scope><scope>7T7</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>SOI</scope><scope>7X8</scope><scope>1XC</scope></search><sort><creationdate>20120403</creationdate><title>Use of Biocides for the Control of Fungal Outbreaks in Subterranean Environments: The Case of the Lascaux Cave in France</title><author>Martin-Sanchez, Pedro M ; Nováková, Alena ; Bastian, Fabiola ; Alabouvette, Claude ; Saiz-Jimenez, Cesareo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a441t-8f85327d8c5e4c6145a682ebbfc429ab5d50c6bb6082798a8ca5ad6afed632833</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Caves</topic><topic>Caves - microbiology</topic><topic>Denaturing Gradient Gel Electrophoresis</topic><topic>Disease Outbreaks - prevention & control</topic><topic>Disinfectants - pharmacology</topic><topic>DNA, Ribosomal Spacer - genetics</topic><topic>Epidemics</topic><topic>France - epidemiology</topic><topic>Fungi</topic><topic>Fusarium - drug effects</topic><topic>Fusarium - genetics</topic><topic>Fusarium - isolation & purification</topic><topic>Fusarium - metabolism</topic><topic>Life Sciences</topic><topic>Microbiology and Parasitology</topic><topic>Molecular Sequence Data</topic><topic>Mycology</topic><topic>Mycoses - epidemiology</topic><topic>Mycoses - microbiology</topic><topic>Mycoses - prevention & control</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal - genetics</topic><topic>Studies</topic><topic>Yeast</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Martin-Sanchez, Pedro M</creatorcontrib><creatorcontrib>Nováková, Alena</creatorcontrib><creatorcontrib>Bastian, Fabiola</creatorcontrib><creatorcontrib>Alabouvette, Claude</creatorcontrib><creatorcontrib>Saiz-Jimenez, Cesareo</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Environmental science & technology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Martin-Sanchez, Pedro M</au><au>Nováková, Alena</au><au>Bastian, Fabiola</au><au>Alabouvette, Claude</au><au>Saiz-Jimenez, Cesareo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Use of Biocides for the Control of Fungal Outbreaks in Subterranean Environments: The Case of the Lascaux Cave in France</atitle><jtitle>Environmental science & technology</jtitle><addtitle>Environ. Sci. Technol</addtitle><date>2012-04-03</date><risdate>2012</risdate><volume>46</volume><issue>7</issue><spage>3762</spage><epage>3770</epage><pages>3762-3770</pages><issn>0013-936X</issn><eissn>1520-5851</eissn><coden>ESTHAG</coden><abstract>The Lascaux Cave in France suffered an outbreak of the fungus Fusarium solani in 2001. Biocides were applied for three years to control this outbreak. Four months after the initial biocide application, a new outbreak appeared in the form of black stains that progressively invaded the cave. The black stains on the ceiling and passage banks were so evident by 2007 that they became one of the cave’s major problems. Therefore, biocides were used again in 2008. The present study investigated the fungal communities associated with the black stains and the effectiveness of the biocides applied, by using cloning, denaturing gradient gel electrophoresis, and culture-dependent methods. A novel species, Ochroconis lascauxensis, was the most abundant fungus in samples collected between 2007 and 2008, and the biocides applied were not effective in eliminating this fungus; on the contrary, they appeared to increase the fungal diversity. The fungal communities represented in the samples collected in 2010 were quite different from those collected in 2008 and 2009: the major OTUs corresponded to black yeasts belonging to the Herpotrichiellaceae family. The origin and evolution of these microorganisms are probably linked to the intensive biocide treatments and to the anthropogenic changes introduced by cave management.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>22380699</pmid><doi>10.1021/es2040625</doi><tpages>9</tpages></addata></record> |
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subjects | Caves Caves - microbiology Denaturing Gradient Gel Electrophoresis Disease Outbreaks - prevention & control Disinfectants - pharmacology DNA, Ribosomal Spacer - genetics Epidemics France - epidemiology Fungi Fusarium - drug effects Fusarium - genetics Fusarium - isolation & purification Fusarium - metabolism Life Sciences Microbiology and Parasitology Molecular Sequence Data Mycology Mycoses - epidemiology Mycoses - microbiology Mycoses - prevention & control Phylogeny RNA, Ribosomal - genetics Studies Yeast |
title | Use of Biocides for the Control of Fungal Outbreaks in Subterranean Environments: The Case of the Lascaux Cave in France |
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