The multicatalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite

Cells must cope with toxic or reactive intermediates formed during metabolism. One coping strategy is to sequester reactions that produce such intermediates within specialized compartments or tunnels connecting different active sites. Here, we show that propionyl-CoA synthase (PCS), an ∼ 400-kDa hom...

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Veröffentlicht in:Nature chemical biology 2018-12, Vol.14 (12), p.1127-1132
Hauptverfasser: Bernhardsgrütter, Iria, Vögeli, Bastian, Wagner, Tristan, Peter, Dominik M., Cortina, Niña Socorro, Kahnt, Jörg, Bange, Gert, Engilberge, Sylvain, Girard, Eric, Riobé, François, Maury, Olivier, Shima, Seigo, Zarzycki, Jan, Erb, Tobias J.
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container_issue 12
container_start_page 1127
container_title Nature chemical biology
container_volume 14
creator Bernhardsgrütter, Iria
Vögeli, Bastian
Wagner, Tristan
Peter, Dominik M.
Cortina, Niña Socorro
Kahnt, Jörg
Bange, Gert
Engilberge, Sylvain
Girard, Eric
Riobé, François
Maury, Olivier
Shima, Seigo
Zarzycki, Jan
Erb, Tobias J.
description Cells must cope with toxic or reactive intermediates formed during metabolism. One coping strategy is to sequester reactions that produce such intermediates within specialized compartments or tunnels connecting different active sites. Here, we show that propionyl-CoA synthase (PCS), an ∼ 400-kDa homodimer, three-domain fusion protein and the key enzyme of the 3-hydroxypropionate bi-cycle for CO 2 fixation, sequesters its reactive intermediate acrylyl-CoA. Structural analysis showed that PCS forms a multicatalytic reaction chamber. Kinetic analysis suggested that access to the reaction chamber and catalysis are synchronized by interdomain communication. The reaction chamber of PCS features three active sites and has a volume of only 33 nm 3 . As one of the smallest multireaction chambers described in biology, PCS may inspire the engineering of a new class of dynamically regulated nanoreactors. Structural and biochemical analysis of propionyl-CoA synthase reveals that it forms a reaction chamber containing three active sites, which sequesters the reactive intermediate acrylyl-CoA during the conversion of 3-hydroxypropionate to propionyl-CoA.
doi_str_mv 10.1038/s41589-018-0153-x
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subjects 631/535/1266
631/92/173
631/92/607
Acyl Coenzyme A - metabolism
Binding sites
Biochemical Engineering
Biochemistry
Biochemistry, Molecular Biology
Biology
Bioorganic Chemistry
Carbon dioxide
Carbon dioxide fixation
Carbon sequestration
Catalysis
Cell Biology
Chemistry
Chemistry and Materials Science
Chemistry/Food Science
Coenzyme A Ligases - chemistry
Coenzyme A Ligases - genetics
Coenzyme A Ligases - metabolism
Crystallography, X-Ray
Cytoplasm
Enzymes
Fusion protein
Intermediates
Kinetics
Life Sciences
Metabolism
Metabolites
Propionyl-CoA synthase
Protein Domains
Proteins
Recombinant Fusion Proteins - chemistry
Recombinant Fusion Proteins - genetics
Recombinant Fusion Proteins - metabolism
Scattering, Small Angle
Sphingomonadaceae - enzymology
Sphingomonadaceae - genetics
Structural analysis
Structural Biology
Tunnels
X-Ray Diffraction
title The multicatalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite
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