Asystasia mosaic Madagascar virus: a novel bipartite begomovirus infecting the weed Asystasia gangetica in Madagascar
Here, we describe for the first time the complete genome sequence of a new bipartite begomovirus in Madagascar isolated from the weed Asystasia gangetica (Acanthaceae), for which we propose the tentative name asystasia mosaic Madagascar virus (AMMGV). DNA-A and -B nucleotide sequences of AMMGV were...
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| Veröffentlicht in: | Archives of virology 2015-06, Vol.160 (6), p.1589-1591 |
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| creator | De Bruyn, Alexandre Harimalala, Mireille Hoareau, Murielle Ranomenjanahary, Sahondramalala Reynaud, Bernard Lefeuvre, Pierre Lett, Jean-Michel |
| description | Here, we describe for the first time the complete genome sequence of a new bipartite begomovirus in Madagascar isolated from the weed
Asystasia gangetica
(Acanthaceae), for which we propose the tentative name asystasia mosaic Madagascar virus (AMMGV). DNA-A and -B nucleotide sequences of AMMGV were only distantly related to known begomovirus sequence and shared highest nucleotide sequence identity of 72.9 % (DNA-A) and 66.9 % (DNA-B) with a recently described bipartite begomovirus infecting
Asystasia
sp. in West Africa. Phylogenetic analysis demonstrated that this novel virus from Madagascar belongs to a new lineage of Old World bipartite begomoviruses. |
| doi_str_mv | 10.1007/s00705-015-2413-3 |
| format | Article |
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Asystasia gangetica
(Acanthaceae), for which we propose the tentative name asystasia mosaic Madagascar virus (AMMGV). DNA-A and -B nucleotide sequences of AMMGV were only distantly related to known begomovirus sequence and shared highest nucleotide sequence identity of 72.9 % (DNA-A) and 66.9 % (DNA-B) with a recently described bipartite begomovirus infecting
Asystasia
sp. in West Africa. Phylogenetic analysis demonstrated that this novel virus from Madagascar belongs to a new lineage of Old World bipartite begomoviruses.</description><identifier>ISSN: 0304-8608</identifier><identifier>EISSN: 1432-8798</identifier><identifier>DOI: 10.1007/s00705-015-2413-3</identifier><identifier>PMID: 25900620</identifier><language>eng</language><publisher>Vienna: Springer Vienna</publisher><subject>Acanthaceae - virology ; Annotated Sequence Record ; Base Sequence ; Begomovirus - genetics ; Biomedical and Life Sciences ; Biomedicine ; Cassava ; Cloning ; Genomes ; Infectious Diseases ; Life Sciences ; Madagascar - epidemiology ; Medical Microbiology ; Molecular Sequence Data ; Phylogenetics ; Phylogeny ; Plant Diseases - virology ; Sequence Alignment ; Virology ; Viruses</subject><ispartof>Archives of virology, 2015-06, Vol.160 (6), p.1589-1591</ispartof><rights>Springer-Verlag Wien 2015</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c476t-1a3c8687821d2b15e29418e1ad007a6999152d0d90f8495f5b7530aa1ca71e083</citedby><cites>FETCH-LOGICAL-c476t-1a3c8687821d2b15e29418e1ad007a6999152d0d90f8495f5b7530aa1ca71e083</cites><orcidid>0000-0003-2645-8098</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00705-015-2413-3$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00705-015-2413-3$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,780,784,885,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25900620$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.univ-reunion.fr/hal-01456716$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>De Bruyn, Alexandre</creatorcontrib><creatorcontrib>Harimalala, Mireille</creatorcontrib><creatorcontrib>Hoareau, Murielle</creatorcontrib><creatorcontrib>Ranomenjanahary, Sahondramalala</creatorcontrib><creatorcontrib>Reynaud, Bernard</creatorcontrib><creatorcontrib>Lefeuvre, Pierre</creatorcontrib><creatorcontrib>Lett, Jean-Michel</creatorcontrib><title>Asystasia mosaic Madagascar virus: a novel bipartite begomovirus infecting the weed Asystasia gangetica in Madagascar</title><title>Archives of virology</title><addtitle>Arch Virol</addtitle><addtitle>Arch Virol</addtitle><description>Here, we describe for the first time the complete genome sequence of a new bipartite begomovirus in Madagascar isolated from the weed
Asystasia gangetica
(Acanthaceae), for which we propose the tentative name asystasia mosaic Madagascar virus (AMMGV). DNA-A and -B nucleotide sequences of AMMGV were only distantly related to known begomovirus sequence and shared highest nucleotide sequence identity of 72.9 % (DNA-A) and 66.9 % (DNA-B) with a recently described bipartite begomovirus infecting
Asystasia
sp. in West Africa. Phylogenetic analysis demonstrated that this novel virus from Madagascar belongs to a new lineage of Old World bipartite begomoviruses.</description><subject>Acanthaceae - virology</subject><subject>Annotated Sequence Record</subject><subject>Base Sequence</subject><subject>Begomovirus - genetics</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Cassava</subject><subject>Cloning</subject><subject>Genomes</subject><subject>Infectious Diseases</subject><subject>Life Sciences</subject><subject>Madagascar - epidemiology</subject><subject>Medical Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Plant Diseases - virology</subject><subject>Sequence Alignment</subject><subject>Virology</subject><subject>Viruses</subject><issn>0304-8608</issn><issn>1432-8798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kU1v1DAQhi0EokvhB3BBlrjAITBjx4nNbVUVirRVL3C2JomTusrHYieL-u_rbUqpkLjY0swz73y8jL1F-IQA5eeYHlAZoMpEjjKTz9gGcykyXRr9nG1AQp7pAvQJexXjDUAKSPWSnQhlAAoBG7Zs422cKXriwxTJ1_ySGuoo1hT4wYclfuHEx-ngel75PYXZz45XrpuG6T7N_di6evZjx-drx3871_C_mh2NnZt9TQl7ovyavWipj-7Nw3_Kfn49_3F2ke2uvn0_2-6yOi-LOUOStS50qQU2okLlhMlRO6QmLU6FMQaVaKAx0OrcqFZVpZJAhDWV6EDLU_Zx1b2m3u6DHyjc2om8vdju7DEGmKuixOKAif2wsvsw_VpcnO3gY-36nkY3LdFiocEUKFAl9P0_6M20hDFtck9JbUAfm-NK1WGKMbj2cQIEe_TPrv6lIZQ9-mdlqnn3oLxUg2seK_4YlgCxAjGl0m3Dk9b_Vb0DDZGkIA</recordid><startdate>20150601</startdate><enddate>20150601</enddate><creator>De Bruyn, Alexandre</creator><creator>Harimalala, Mireille</creator><creator>Hoareau, Murielle</creator><creator>Ranomenjanahary, Sahondramalala</creator><creator>Reynaud, Bernard</creator><creator>Lefeuvre, Pierre</creator><creator>Lett, Jean-Michel</creator><general>Springer Vienna</general><general>Springer Nature B.V</general><general>Springer Verlag</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope><scope>1XC</scope><orcidid>https://orcid.org/0000-0003-2645-8098</orcidid></search><sort><creationdate>20150601</creationdate><title>Asystasia mosaic Madagascar virus: a novel bipartite begomovirus infecting the weed Asystasia gangetica in Madagascar</title><author>De Bruyn, Alexandre ; Harimalala, Mireille ; Hoareau, Murielle ; Ranomenjanahary, Sahondramalala ; Reynaud, Bernard ; Lefeuvre, Pierre ; Lett, Jean-Michel</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c476t-1a3c8687821d2b15e29418e1ad007a6999152d0d90f8495f5b7530aa1ca71e083</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Acanthaceae - virology</topic><topic>Annotated Sequence Record</topic><topic>Base Sequence</topic><topic>Begomovirus - genetics</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Cassava</topic><topic>Cloning</topic><topic>Genomes</topic><topic>Infectious Diseases</topic><topic>Life Sciences</topic><topic>Madagascar - epidemiology</topic><topic>Medical Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Plant Diseases - virology</topic><topic>Sequence Alignment</topic><topic>Virology</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>De Bruyn, Alexandre</creatorcontrib><creatorcontrib>Harimalala, Mireille</creatorcontrib><creatorcontrib>Hoareau, Murielle</creatorcontrib><creatorcontrib>Ranomenjanahary, Sahondramalala</creatorcontrib><creatorcontrib>Reynaud, Bernard</creatorcontrib><creatorcontrib>Lefeuvre, Pierre</creatorcontrib><creatorcontrib>Lett, Jean-Michel</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Archives of virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>De Bruyn, Alexandre</au><au>Harimalala, Mireille</au><au>Hoareau, Murielle</au><au>Ranomenjanahary, Sahondramalala</au><au>Reynaud, Bernard</au><au>Lefeuvre, Pierre</au><au>Lett, Jean-Michel</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Asystasia mosaic Madagascar virus: a novel bipartite begomovirus infecting the weed Asystasia gangetica in Madagascar</atitle><jtitle>Archives of virology</jtitle><stitle>Arch Virol</stitle><addtitle>Arch Virol</addtitle><date>2015-06-01</date><risdate>2015</risdate><volume>160</volume><issue>6</issue><spage>1589</spage><epage>1591</epage><pages>1589-1591</pages><issn>0304-8608</issn><eissn>1432-8798</eissn><abstract>Here, we describe for the first time the complete genome sequence of a new bipartite begomovirus in Madagascar isolated from the weed
Asystasia gangetica
(Acanthaceae), for which we propose the tentative name asystasia mosaic Madagascar virus (AMMGV). DNA-A and -B nucleotide sequences of AMMGV were only distantly related to known begomovirus sequence and shared highest nucleotide sequence identity of 72.9 % (DNA-A) and 66.9 % (DNA-B) with a recently described bipartite begomovirus infecting
Asystasia
sp. in West Africa. Phylogenetic analysis demonstrated that this novel virus from Madagascar belongs to a new lineage of Old World bipartite begomoviruses.</abstract><cop>Vienna</cop><pub>Springer Vienna</pub><pmid>25900620</pmid><doi>10.1007/s00705-015-2413-3</doi><tpages>3</tpages><orcidid>https://orcid.org/0000-0003-2645-8098</orcidid></addata></record> |
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| ispartof | Archives of virology, 2015-06, Vol.160 (6), p.1589-1591 |
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| subjects | Acanthaceae - virology Annotated Sequence Record Base Sequence Begomovirus - genetics Biomedical and Life Sciences Biomedicine Cassava Cloning Genomes Infectious Diseases Life Sciences Madagascar - epidemiology Medical Microbiology Molecular Sequence Data Phylogenetics Phylogeny Plant Diseases - virology Sequence Alignment Virology Viruses |
| title | Asystasia mosaic Madagascar virus: a novel bipartite begomovirus infecting the weed Asystasia gangetica in Madagascar |
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