Radiation damage of biomolecules (RADAM) database development: current status
Ion beam therapy offers the possibility of excellent dose localization for treatment of malignant tumours, minimizing radiation damage in normal tissue, while maximizing cell killing within the tumour. However, as the underlying dependent physical, chemical and biological processes are too complex t...
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Veröffentlicht in: | Journal of physics. Conference series 2013-01, Vol.438 (1), p.12016-8 |
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description | Ion beam therapy offers the possibility of excellent dose localization for treatment of malignant tumours, minimizing radiation damage in normal tissue, while maximizing cell killing within the tumour. However, as the underlying dependent physical, chemical and biological processes are too complex to treat them on a purely analytical level, most of our current and future understanding will rely on computer simulations, based on mathematical equations, algorithms and last, but not least, on the available atomic and molecular data. The viability of the simulated output and the success of any computer simulation will be determined by these data, which are treated as the input variables in each computer simulation performed. The radiation research community lacks a complete database for the cross sections of all the different processes involved in ion beam induced damage: ionization and excitation cross sections for ions with liquid water and biological molecules, all the possible electron – medium interactions, dielectric response data, electron attachment to biomolecules etc. In this paper we discuss current progress in the creation of such a database, outline the roadmap of the project and review plans for the exploitation of such a database in future simulations. |
doi_str_mv | 10.1088/1742-6596/438/1/012016 |
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The radiation research community lacks a complete database for the cross sections of all the different processes involved in ion beam induced damage: ionization and excitation cross sections for ions with liquid water and biological molecules, all the possible electron – medium interactions, dielectric response data, electron attachment to biomolecules etc. In this paper we discuss current progress in the creation of such a database, outline the roadmap of the project and review plans for the exploitation of such a database in future simulations.</description><identifier>ISSN: 1742-6596</identifier><identifier>ISSN: 1742-6588</identifier><identifier>EISSN: 1742-6596</identifier><identifier>DOI: 10.1088/1742-6596/438/1/012016</identifier><language>eng</language><publisher>Bristol: IOP Publishing</publisher><subject>Algorithms ; Biological ; Biological activity ; Biomolecules ; Computer simulation ; Damage localization ; Electron attachment ; Ion beams ; Ionization cross sections ; Mathematical analysis ; Mathematical models ; Physics ; Radiation ; Radiation damage ; Tumors ; Tumours ; Water</subject><ispartof>Journal of physics. Conference series, 2013-01, Vol.438 (1), p.12016-8</ispartof><rights>2013. This work is published under http://creativecommons.org/licenses/by/3.0/ (the “License”). 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Conference series</title><description>Ion beam therapy offers the possibility of excellent dose localization for treatment of malignant tumours, minimizing radiation damage in normal tissue, while maximizing cell killing within the tumour. However, as the underlying dependent physical, chemical and biological processes are too complex to treat them on a purely analytical level, most of our current and future understanding will rely on computer simulations, based on mathematical equations, algorithms and last, but not least, on the available atomic and molecular data. The viability of the simulated output and the success of any computer simulation will be determined by these data, which are treated as the input variables in each computer simulation performed. The radiation research community lacks a complete database for the cross sections of all the different processes involved in ion beam induced damage: ionization and excitation cross sections for ions with liquid water and biological molecules, all the possible electron – medium interactions, dielectric response data, electron attachment to biomolecules etc. In this paper we discuss current progress in the creation of such a database, outline the roadmap of the project and review plans for the exploitation of such a database in future simulations.</description><subject>Algorithms</subject><subject>Biological</subject><subject>Biological activity</subject><subject>Biomolecules</subject><subject>Computer simulation</subject><subject>Damage localization</subject><subject>Electron attachment</subject><subject>Ion beams</subject><subject>Ionization cross sections</subject><subject>Mathematical analysis</subject><subject>Mathematical models</subject><subject>Physics</subject><subject>Radiation</subject><subject>Radiation damage</subject><subject>Tumors</subject><subject>Tumours</subject><subject>Water</subject><issn>1742-6596</issn><issn>1742-6588</issn><issn>1742-6596</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><recordid>eNpdkV1LwzAUhoMoOKd_QQrebBd1-WjaxLvi14QNYeh1SNsT7WiXmbQD_70plSHmJu_JeXg5OS9C1wTfEizEgmQJjVMu00XCQrXAhGKSnqDJsXH6R5-jC--3GLNwsglab3RV6662u6jSrf6AyJqoqG1rGyj7Bnw02-QP-Xoe2p0utIeoggM0dt_CrruLyt65ICLf6a73l-jM6MbD1e89Re9Pj2_3y3j1-vxyn6_ikknRxVIK4FgAhozqIqVGGJ0QbNKiKgpOMRNBE-BGM4xNIqBgSUUqA4ICL1PJpmg--n7qRu1d3Wr3rayu1TJfqeENYylxxpIDCexsZPfOfvXgO9XWvoSm0TuwvVckI0JSLsRge_MP3dre7cJPFOVZlmQp5TxQ6UiVznrvwBwnIFgNiahh2WpYtgqJKKLGRNgP1xV8pQ</recordid><startdate>20130101</startdate><enddate>20130101</enddate><creator>Denifl, S</creator><creator>Garcia, G</creator><creator>Huber, B A</creator><creator>Marinković, B P</creator><creator>Mason, N</creator><creator>Postler, J</creator><creator>Rabus, H</creator><creator>Rixon, G</creator><creator>Solov'yov, A V</creator><creator>Suraud, E</creator><creator>Yakubovich, A V</creator><general>IOP Publishing</general><general>IOP Science</general><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>H8D</scope><scope>HCIFZ</scope><scope>L7M</scope><scope>P5Z</scope><scope>P62</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7U5</scope><scope>8BQ</scope><scope>JG9</scope><scope>1XC</scope></search><sort><creationdate>20130101</creationdate><title>Radiation damage of biomolecules (RADAM) database development: current status</title><author>Denifl, S ; Garcia, G ; Huber, B A ; Marinković, B P ; Mason, N ; Postler, J ; Rabus, H ; Rixon, G ; Solov'yov, A V ; Suraud, E ; Yakubovich, A V</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c398t-998e508e0e72ab62f8fa410f6bdbb520380f61e5fa300f48eb34d1dfe82e5c693</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Algorithms</topic><topic>Biological</topic><topic>Biological activity</topic><topic>Biomolecules</topic><topic>Computer simulation</topic><topic>Damage localization</topic><topic>Electron attachment</topic><topic>Ion beams</topic><topic>Ionization cross sections</topic><topic>Mathematical analysis</topic><topic>Mathematical models</topic><topic>Physics</topic><topic>Radiation</topic><topic>Radiation damage</topic><topic>Tumors</topic><topic>Tumours</topic><topic>Water</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Denifl, S</creatorcontrib><creatorcontrib>Garcia, G</creatorcontrib><creatorcontrib>Huber, B A</creatorcontrib><creatorcontrib>Marinković, B P</creatorcontrib><creatorcontrib>Mason, N</creatorcontrib><creatorcontrib>Postler, J</creatorcontrib><creatorcontrib>Rabus, H</creatorcontrib><creatorcontrib>Rixon, G</creatorcontrib><creatorcontrib>Solov'yov, A V</creatorcontrib><creatorcontrib>Suraud, E</creatorcontrib><creatorcontrib>Yakubovich, A V</creatorcontrib><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies & Aerospace Collection</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Aerospace Database</collection><collection>SciTech Premium Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Advanced Technologies & Aerospace Database</collection><collection>ProQuest Advanced Technologies & Aerospace Collection</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Materials Research Database</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Journal of physics. 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subjects | Algorithms Biological Biological activity Biomolecules Computer simulation Damage localization Electron attachment Ion beams Ionization cross sections Mathematical analysis Mathematical models Physics Radiation Radiation damage Tumors Tumours Water |
title | Radiation damage of biomolecules (RADAM) database development: current status |
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