Regional appearance modeling based on the clustering of intensity profiles
► Regional clustering with no requirement for accurate pointwise registration. ► Propose multimodal assignment: each vertex may have several appearance modes. ► First use of spectral clustering on intensity profiles with selection of number of classes. ► New boosted clustering method with localizati...
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Veröffentlicht in: | Computer vision and image understanding 2013-06, Vol.117 (6), p.705-717 |
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description | ► Regional clustering with no requirement for accurate pointwise registration. ► Propose multimodal assignment: each vertex may have several appearance modes. ► First use of spectral clustering on intensity profiles with selection of number of classes. ► New boosted clustering method with localization criterion to optimize segmentation. ► Comparison with PCA-based appearance prior on a database of 35 liver CT data.
Model-based image segmentation is a popular approach for the segmentation of anatomical structures from medical images because it includes prior knowledge about the shape and appearance of structures of interest. This paper focuses on the formulation of a novel appearance prior that can cope with large variability between subjects, for instance due to the presence of pathologies. Instead of relying on Principal Component Analysis such as in Statistical Appearance Models, our approach relies on a multimodal intensity profile atlas from which a point may be assigned to several profile modes consisting of a mean profile and its covariance matrix. These profile modes are first estimated without any intra-subject registration through a boosted EM classification based on spectral clustering. Then, they are projected on a reference mesh whose role is to store the appearance information in a common geometric representation. We show that this prior leads to better performance than the classical monomodal Principal Component Analysis approach while relying on fewer profile modes. |
doi_str_mv | 10.1016/j.cviu.2013.01.011 |
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Model-based image segmentation is a popular approach for the segmentation of anatomical structures from medical images because it includes prior knowledge about the shape and appearance of structures of interest. This paper focuses on the formulation of a novel appearance prior that can cope with large variability between subjects, for instance due to the presence of pathologies. Instead of relying on Principal Component Analysis such as in Statistical Appearance Models, our approach relies on a multimodal intensity profile atlas from which a point may be assigned to several profile modes consisting of a mean profile and its covariance matrix. These profile modes are first estimated without any intra-subject registration through a boosted EM classification based on spectral clustering. Then, they are projected on a reference mesh whose role is to store the appearance information in a common geometric representation. We show that this prior leads to better performance than the classical monomodal Principal Component Analysis approach while relying on fewer profile modes.</description><identifier>ISSN: 1077-3142</identifier><identifier>EISSN: 1090-235X</identifier><identifier>DOI: 10.1016/j.cviu.2013.01.011</identifier><identifier>CODEN: CVIUF4</identifier><language>eng</language><publisher>Amsterdam: Elsevier Inc</publisher><subject>Appearance modeling ; Applied sciences ; Artificial intelligence ; Biological and medical sciences ; Classification ; Clustering ; Computer Science ; Computer science; control theory; systems ; Data processing. List processing. Character string processing ; Engineering Sciences ; Exact sciences and technology ; Image Processing ; Image segmentation ; Investigative techniques, diagnostic techniques (general aspects) ; Medical Imaging ; Medical sciences ; Memory organisation. Data processing ; Model-based image segmentation ; Modeling and Simulation ; Pathology ; Pattern recognition. Digital image processing. Computational geometry ; Principal component analysis ; Signal and Image Processing ; Software ; Spectra ; Stores ; Unsupervised clustering</subject><ispartof>Computer vision and image understanding, 2013-06, Vol.117 (6), p.705-717</ispartof><rights>2013 Elsevier Inc.</rights><rights>2014 INIST-CNRS</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c441t-5ed3199c800fce2e6055471df1eab448ca27563ce642550621f2f5e10f3570333</citedby><cites>FETCH-LOGICAL-c441t-5ed3199c800fce2e6055471df1eab448ca27563ce642550621f2f5e10f3570333</cites><orcidid>0000-0001-6050-5949</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1077314213000271$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,314,776,780,881,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=27364624$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://inria.hal.science/hal-00813880$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Chung, François</creatorcontrib><creatorcontrib>Delingette, Hervé</creatorcontrib><title>Regional appearance modeling based on the clustering of intensity profiles</title><title>Computer vision and image understanding</title><description>► Regional clustering with no requirement for accurate pointwise registration. ► Propose multimodal assignment: each vertex may have several appearance modes. ► First use of spectral clustering on intensity profiles with selection of number of classes. ► New boosted clustering method with localization criterion to optimize segmentation. ► Comparison with PCA-based appearance prior on a database of 35 liver CT data.
Model-based image segmentation is a popular approach for the segmentation of anatomical structures from medical images because it includes prior knowledge about the shape and appearance of structures of interest. This paper focuses on the formulation of a novel appearance prior that can cope with large variability between subjects, for instance due to the presence of pathologies. Instead of relying on Principal Component Analysis such as in Statistical Appearance Models, our approach relies on a multimodal intensity profile atlas from which a point may be assigned to several profile modes consisting of a mean profile and its covariance matrix. These profile modes are first estimated without any intra-subject registration through a boosted EM classification based on spectral clustering. Then, they are projected on a reference mesh whose role is to store the appearance information in a common geometric representation. We show that this prior leads to better performance than the classical monomodal Principal Component Analysis approach while relying on fewer profile modes.</description><subject>Appearance modeling</subject><subject>Applied sciences</subject><subject>Artificial intelligence</subject><subject>Biological and medical sciences</subject><subject>Classification</subject><subject>Clustering</subject><subject>Computer Science</subject><subject>Computer science; control theory; systems</subject><subject>Data processing. List processing. Character string processing</subject><subject>Engineering Sciences</subject><subject>Exact sciences and technology</subject><subject>Image Processing</subject><subject>Image segmentation</subject><subject>Investigative techniques, diagnostic techniques (general aspects)</subject><subject>Medical Imaging</subject><subject>Medical sciences</subject><subject>Memory organisation. Data processing</subject><subject>Model-based image segmentation</subject><subject>Modeling and Simulation</subject><subject>Pathology</subject><subject>Pattern recognition. Digital image processing. Computational geometry</subject><subject>Principal component analysis</subject><subject>Signal and Image Processing</subject><subject>Software</subject><subject>Spectra</subject><subject>Stores</subject><subject>Unsupervised clustering</subject><issn>1077-3142</issn><issn>1090-235X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNp9kE1rGzEQhpeSQhO3f6CnvRSawzoz-tgP6MWEtE4wBEoLvQlZO3Jk5JUrrQ3-99Hi4GNgYMTw6J3hKYqvCHMErO-2c3N0hzkD5HPAXPihuEbooGJc_rua3k1TcRTsU3GT0hYyITq8Lp5-08aFQftS7_ekox4MlbvQk3fDplzrRH0ZhnJ8odL4QxopTvNgSzeMNCQ3nsp9DNZ5Sp-Lj1b7RF_e-qz4-_Phz_2yWj3_erxfrCojBI6VpJ5j15kWwBpiVIOUosHeIum1EK3RrJE1N1QLJiXUDC2zkhAslw1wzmfF7Tn3RXu1j26n40kF7dRysVLTDKBF3rZwxMx-P7P5yP8HSqPauWTIez1QOCSFXHRC1tC0GWVn1MSQUiR7yUZQk2S1VZNkNUlWgLmm_G9v-ToZ7e3kz6XLT9bwWtRMZO7HmaMs5ugoqmQcZde9i2RG1Qf33ppXHuaQ9g</recordid><startdate>20130601</startdate><enddate>20130601</enddate><creator>Chung, François</creator><creator>Delingette, Hervé</creator><general>Elsevier Inc</general><general>Elsevier</general><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SC</scope><scope>8FD</scope><scope>JQ2</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>1XC</scope><scope>VOOES</scope><orcidid>https://orcid.org/0000-0001-6050-5949</orcidid></search><sort><creationdate>20130601</creationdate><title>Regional appearance modeling based on the clustering of intensity profiles</title><author>Chung, François ; Delingette, Hervé</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c441t-5ed3199c800fce2e6055471df1eab448ca27563ce642550621f2f5e10f3570333</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Appearance modeling</topic><topic>Applied sciences</topic><topic>Artificial intelligence</topic><topic>Biological and medical sciences</topic><topic>Classification</topic><topic>Clustering</topic><topic>Computer Science</topic><topic>Computer science; control theory; systems</topic><topic>Data processing. List processing. Character string processing</topic><topic>Engineering Sciences</topic><topic>Exact sciences and technology</topic><topic>Image Processing</topic><topic>Image segmentation</topic><topic>Investigative techniques, diagnostic techniques (general aspects)</topic><topic>Medical Imaging</topic><topic>Medical sciences</topic><topic>Memory organisation. Data processing</topic><topic>Model-based image segmentation</topic><topic>Modeling and Simulation</topic><topic>Pathology</topic><topic>Pattern recognition. Digital image processing. Computational geometry</topic><topic>Principal component analysis</topic><topic>Signal and Image Processing</topic><topic>Software</topic><topic>Spectra</topic><topic>Stores</topic><topic>Unsupervised clustering</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chung, François</creatorcontrib><creatorcontrib>Delingette, Hervé</creatorcontrib><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Computer and Information Systems Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><jtitle>Computer vision and image understanding</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chung, François</au><au>Delingette, Hervé</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Regional appearance modeling based on the clustering of intensity profiles</atitle><jtitle>Computer vision and image understanding</jtitle><date>2013-06-01</date><risdate>2013</risdate><volume>117</volume><issue>6</issue><spage>705</spage><epage>717</epage><pages>705-717</pages><issn>1077-3142</issn><eissn>1090-235X</eissn><coden>CVIUF4</coden><abstract>► Regional clustering with no requirement for accurate pointwise registration. ► Propose multimodal assignment: each vertex may have several appearance modes. ► First use of spectral clustering on intensity profiles with selection of number of classes. ► New boosted clustering method with localization criterion to optimize segmentation. ► Comparison with PCA-based appearance prior on a database of 35 liver CT data.
Model-based image segmentation is a popular approach for the segmentation of anatomical structures from medical images because it includes prior knowledge about the shape and appearance of structures of interest. This paper focuses on the formulation of a novel appearance prior that can cope with large variability between subjects, for instance due to the presence of pathologies. Instead of relying on Principal Component Analysis such as in Statistical Appearance Models, our approach relies on a multimodal intensity profile atlas from which a point may be assigned to several profile modes consisting of a mean profile and its covariance matrix. These profile modes are first estimated without any intra-subject registration through a boosted EM classification based on spectral clustering. Then, they are projected on a reference mesh whose role is to store the appearance information in a common geometric representation. We show that this prior leads to better performance than the classical monomodal Principal Component Analysis approach while relying on fewer profile modes.</abstract><cop>Amsterdam</cop><pub>Elsevier Inc</pub><doi>10.1016/j.cviu.2013.01.011</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0001-6050-5949</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Appearance modeling Applied sciences Artificial intelligence Biological and medical sciences Classification Clustering Computer Science Computer science control theory systems Data processing. List processing. Character string processing Engineering Sciences Exact sciences and technology Image Processing Image segmentation Investigative techniques, diagnostic techniques (general aspects) Medical Imaging Medical sciences Memory organisation. Data processing Model-based image segmentation Modeling and Simulation Pathology Pattern recognition. Digital image processing. Computational geometry Principal component analysis Signal and Image Processing Software Spectra Stores Unsupervised clustering |
title | Regional appearance modeling based on the clustering of intensity profiles |
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