Marine culturable yeasts in deep-sea hydrothermal vents: species richness and association with fauna
Investigations of the diversity of culturable yeasts at deep-sea hydrothermal sites have suggested possible interactions with endemic fauna. Samples were collected during various oceanographic cruises at the Mid-Atlantic Ridge, South Pacific Basins and East Pacific Rise. Cultures of 32 isolates, mos...
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| Veröffentlicht in: | FEMS microbiology ecology 2010-07, Vol.73 (1), p.121-133 |
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| creator | Burgaud, Gaëtan Arzur, Danielle Durand, Lucile Cambon-Bonavita, Marie-Anne Barbier, Georges |
| description | Investigations of the diversity of culturable yeasts at deep-sea hydrothermal sites have suggested possible interactions with endemic fauna. Samples were collected during various oceanographic cruises at the Mid-Atlantic Ridge, South Pacific Basins and East Pacific Rise. Cultures of 32 isolates, mostly associated with animals, were collected. Phylogenetic analyses of 26S rRNA gene sequences revealed that the yeasts belonged to Ascomycota and Basidiomycota phyla, with the identification of several genera: Rhodotorula, Rhodosporidium, Candida, Debaryomyces and Cryptococcus. Those genera are usually isolated from deep-sea environments. To our knowledge, this is the first report of yeasts associated with deep-sea hydrothermal animals. |
| doi_str_mv | 10.1111/j.1574-6941.2010.00881.x |
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Samples were collected during various oceanographic cruises at the Mid-Atlantic Ridge, South Pacific Basins and East Pacific Rise. Cultures of 32 isolates, mostly associated with animals, were collected. Phylogenetic analyses of 26S rRNA gene sequences revealed that the yeasts belonged to Ascomycota and Basidiomycota phyla, with the identification of several genera: Rhodotorula, Rhodosporidium, Candida, Debaryomyces and Cryptococcus. Those genera are usually isolated from deep-sea environments. To our knowledge, this is the first report of yeasts associated with deep-sea hydrothermal animals.</description><identifier>ISSN: 0168-6496</identifier><identifier>EISSN: 1574-6941</identifier><identifier>DOI: 10.1111/j.1574-6941.2010.00881.x</identifier><identifier>PMID: 20455940</identifier><language>eng</language><publisher>Oxford, UK: Oxford, UK : Blackwell Publishing Ltd</publisher><subject>26S rRNA gene ; Animal and plant ecology ; Animal, plant and microbial ecology ; Animals ; Ascomycota ; Ascomycota - classification ; Ascomycota - genetics ; Ascomycota - isolation & purification ; Basidiomycota ; Basidiomycota - classification ; Basidiomycota - genetics ; Basidiomycota - isolation & purification ; Basins ; Biodiversity ; Biological and medical sciences ; Candida ; Cryptococcus ; Debaryomyces ; Deep sea ; Deep sea environments ; DNA, Fungal ; DNA, Fungal - genetics ; Ecology ; Fauna ; FISH ; Fundamental and applied biological sciences. Psychology ; Gene sequencing ; Hydrothermal plumes ; Hydrothermal vents ; In Situ Hybridization, Fluorescence ; Life Sciences ; Marine ; Microbial ecology ; Microbiology ; Microbiology and Parasitology ; Ocean basins ; Oceans and Seas ; Phylogeny ; Rhodosporidium ; Rhodotorula ; RNA, Ribosomal ; RNA, Ribosomal - genetics ; rRNA ; rRNA 26S ; Sea water ecosystems ; Seawater ; Seawater - microbiology ; Sequence Analysis, DNA ; Species richness ; Synecology ; Vents ; Water Microbiology ; Yeast ; Yeasts</subject><ispartof>FEMS microbiology ecology, 2010-07, Vol.73 (1), p.121-133</ispartof><rights>2010 Federation of European Microbiological Societies 2010</rights><rights>Journal compilation © 2010 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. No claim to original French government works</rights><rights>2015 INIST-CNRS</rights><rights>2010 Federation of European Microbiological Societies</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5601-a7851bf805c27c764c215771ee5c4efa2bb60d2476c5670ffb679146212a60643</citedby><orcidid>0000-0002-4076-0472 ; 0000-0001-7741-4429</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1574-6941.2010.00881.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1574-6941.2010.00881.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>230,314,776,780,881,1411,27903,27904,45553,45554</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=22861995$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20455940$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.univ-brest.fr/hal-00609796$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Burgaud, Gaëtan</creatorcontrib><creatorcontrib>Arzur, Danielle</creatorcontrib><creatorcontrib>Durand, Lucile</creatorcontrib><creatorcontrib>Cambon-Bonavita, Marie-Anne</creatorcontrib><creatorcontrib>Barbier, Georges</creatorcontrib><title>Marine culturable yeasts in deep-sea hydrothermal vents: species richness and association with fauna</title><title>FEMS microbiology ecology</title><addtitle>FEMS Microbiol Ecol</addtitle><description>Investigations of the diversity of culturable yeasts at deep-sea hydrothermal sites have suggested possible interactions with endemic fauna. Samples were collected during various oceanographic cruises at the Mid-Atlantic Ridge, South Pacific Basins and East Pacific Rise. Cultures of 32 isolates, mostly associated with animals, were collected. Phylogenetic analyses of 26S rRNA gene sequences revealed that the yeasts belonged to Ascomycota and Basidiomycota phyla, with the identification of several genera: Rhodotorula, Rhodosporidium, Candida, Debaryomyces and Cryptococcus. Those genera are usually isolated from deep-sea environments. To our knowledge, this is the first report of yeasts associated with deep-sea hydrothermal animals.</description><subject>26S rRNA gene</subject><subject>Animal and plant ecology</subject><subject>Animal, plant and microbial ecology</subject><subject>Animals</subject><subject>Ascomycota</subject><subject>Ascomycota - classification</subject><subject>Ascomycota - genetics</subject><subject>Ascomycota - isolation & purification</subject><subject>Basidiomycota</subject><subject>Basidiomycota - classification</subject><subject>Basidiomycota - genetics</subject><subject>Basidiomycota - isolation & purification</subject><subject>Basins</subject><subject>Biodiversity</subject><subject>Biological and medical sciences</subject><subject>Candida</subject><subject>Cryptococcus</subject><subject>Debaryomyces</subject><subject>Deep sea</subject><subject>Deep sea environments</subject><subject>DNA, Fungal</subject><subject>DNA, Fungal - genetics</subject><subject>Ecology</subject><subject>Fauna</subject><subject>FISH</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene sequencing</subject><subject>Hydrothermal plumes</subject><subject>Hydrothermal vents</subject><subject>In Situ Hybridization, Fluorescence</subject><subject>Life Sciences</subject><subject>Marine</subject><subject>Microbial ecology</subject><subject>Microbiology</subject><subject>Microbiology and Parasitology</subject><subject>Ocean basins</subject><subject>Oceans and Seas</subject><subject>Phylogeny</subject><subject>Rhodosporidium</subject><subject>Rhodotorula</subject><subject>RNA, Ribosomal</subject><subject>RNA, Ribosomal - genetics</subject><subject>rRNA</subject><subject>rRNA 26S</subject><subject>Sea water ecosystems</subject><subject>Seawater</subject><subject>Seawater - microbiology</subject><subject>Sequence Analysis, DNA</subject><subject>Species richness</subject><subject>Synecology</subject><subject>Vents</subject><subject>Water Microbiology</subject><subject>Yeast</subject><subject>Yeasts</subject><issn>0168-6496</issn><issn>1574-6941</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqFkk1v1DAQhiMEokvhL4AlhBCHLOPPJBWXqmop0lYcoGdr4jjEq2wS7KTt_nscsiwSCGEfPJp53tGM_CYJobCm8bzfrqnMRKoKQdcMYhYgz-n64VGyOhYeJyugKk-VKNRJ8iyELQCVXMDT5ISBkLIQsEqqG_Sus8RM7Th5LFtL9hbDGIjrSGXtkAaLpNlXvh8b63fYkjvbjeGMhMEaZwPxzjSdDYFgVxEMoTcOR9d35N6NDalx6vB58qTGNtgXh_c0ub26_HpxnW4-f_x0cb5JjVRAU8xyScs6B2lYZjIlDIvbZNRaaYStkZWlgoqJTEU-g7ouVVZQoRhlqEAJfpq8W_o22OrBux36ve7R6evzjZ5zAAqKrFB3NLJvF3bw_ffJhlHvXDC2bbGz_RR0JmJjwSj8n-RcFvHySL7-g9z2k-_iyppxUJzlADJSLw_UVO5sdRz016dE4M0BwGCwrT12xoXfHMsVLYq50YeFu3et3R_rFPRsEr3Vsxf07AU9m0T_NIl-0FeXNzGIcr7I-2n4hzj9SxxVrxZVjb3Gbz4OdvslEhxoLopccf4DOvvEwg</recordid><startdate>201007</startdate><enddate>201007</enddate><creator>Burgaud, Gaëtan</creator><creator>Arzur, Danielle</creator><creator>Durand, Lucile</creator><creator>Cambon-Bonavita, Marie-Anne</creator><creator>Barbier, Georges</creator><general>Oxford, UK : Blackwell Publishing Ltd</general><general>Blackwell Publishing Ltd</general><general>Blackwell</general><general>Oxford University Press</general><general>Wiley-Blackwell</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>3V.</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>7ST</scope><scope>7TN</scope><scope>7U6</scope><scope>F1W</scope><scope>H95</scope><scope>H98</scope><scope>L.G</scope><scope>1XC</scope><scope>VOOES</scope><orcidid>https://orcid.org/0000-0002-4076-0472</orcidid><orcidid>https://orcid.org/0000-0001-7741-4429</orcidid></search><sort><creationdate>201007</creationdate><title>Marine culturable yeasts in deep-sea hydrothermal vents: species richness and association with fauna</title><author>Burgaud, Gaëtan ; Arzur, Danielle ; Durand, Lucile ; Cambon-Bonavita, Marie-Anne ; Barbier, Georges</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5601-a7851bf805c27c764c215771ee5c4efa2bb60d2476c5670ffb679146212a60643</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>26S rRNA gene</topic><topic>Animal and plant ecology</topic><topic>Animal, plant and microbial ecology</topic><topic>Animals</topic><topic>Ascomycota</topic><topic>Ascomycota - classification</topic><topic>Ascomycota - genetics</topic><topic>Ascomycota - isolation & purification</topic><topic>Basidiomycota</topic><topic>Basidiomycota - classification</topic><topic>Basidiomycota - genetics</topic><topic>Basidiomycota - isolation & purification</topic><topic>Basins</topic><topic>Biodiversity</topic><topic>Biological and medical sciences</topic><topic>Candida</topic><topic>Cryptococcus</topic><topic>Debaryomyces</topic><topic>Deep sea</topic><topic>Deep sea environments</topic><topic>DNA, Fungal</topic><topic>DNA, Fungal - genetics</topic><topic>Ecology</topic><topic>Fauna</topic><topic>FISH</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene sequencing</topic><topic>Hydrothermal plumes</topic><topic>Hydrothermal vents</topic><topic>In Situ Hybridization, Fluorescence</topic><topic>Life Sciences</topic><topic>Marine</topic><topic>Microbial ecology</topic><topic>Microbiology</topic><topic>Microbiology and Parasitology</topic><topic>Ocean basins</topic><topic>Oceans and Seas</topic><topic>Phylogeny</topic><topic>Rhodosporidium</topic><topic>Rhodotorula</topic><topic>RNA, Ribosomal</topic><topic>RNA, Ribosomal - genetics</topic><topic>rRNA</topic><topic>rRNA 26S</topic><topic>Sea water ecosystems</topic><topic>Seawater</topic><topic>Seawater - microbiology</topic><topic>Sequence Analysis, DNA</topic><topic>Species richness</topic><topic>Synecology</topic><topic>Vents</topic><topic>Water Microbiology</topic><topic>Yeast</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Burgaud, Gaëtan</creatorcontrib><creatorcontrib>Arzur, Danielle</creatorcontrib><creatorcontrib>Durand, Lucile</creatorcontrib><creatorcontrib>Cambon-Bonavita, Marie-Anne</creatorcontrib><creatorcontrib>Barbier, Georges</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Ecology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - 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Samples were collected during various oceanographic cruises at the Mid-Atlantic Ridge, South Pacific Basins and East Pacific Rise. Cultures of 32 isolates, mostly associated with animals, were collected. Phylogenetic analyses of 26S rRNA gene sequences revealed that the yeasts belonged to Ascomycota and Basidiomycota phyla, with the identification of several genera: Rhodotorula, Rhodosporidium, Candida, Debaryomyces and Cryptococcus. Those genera are usually isolated from deep-sea environments. To our knowledge, this is the first report of yeasts associated with deep-sea hydrothermal animals.</abstract><cop>Oxford, UK</cop><pub>Oxford, UK : Blackwell Publishing Ltd</pub><pmid>20455940</pmid><doi>10.1111/j.1574-6941.2010.00881.x</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0002-4076-0472</orcidid><orcidid>https://orcid.org/0000-0001-7741-4429</orcidid><oa>free_for_read</oa></addata></record> |
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| source | MEDLINE; Wiley Online Library Journals Frontfile Complete; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Oxford Journals Open Access Collection |
| subjects | 26S rRNA gene Animal and plant ecology Animal, plant and microbial ecology Animals Ascomycota Ascomycota - classification Ascomycota - genetics Ascomycota - isolation & purification Basidiomycota Basidiomycota - classification Basidiomycota - genetics Basidiomycota - isolation & purification Basins Biodiversity Biological and medical sciences Candida Cryptococcus Debaryomyces Deep sea Deep sea environments DNA, Fungal DNA, Fungal - genetics Ecology Fauna FISH Fundamental and applied biological sciences. Psychology Gene sequencing Hydrothermal plumes Hydrothermal vents In Situ Hybridization, Fluorescence Life Sciences Marine Microbial ecology Microbiology Microbiology and Parasitology Ocean basins Oceans and Seas Phylogeny Rhodosporidium Rhodotorula RNA, Ribosomal RNA, Ribosomal - genetics rRNA rRNA 26S Sea water ecosystems Seawater Seawater - microbiology Sequence Analysis, DNA Species richness Synecology Vents Water Microbiology Yeast Yeasts |
| title | Marine culturable yeasts in deep-sea hydrothermal vents: species richness and association with fauna |
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