The utility of existing passerine microsatellite markers for genetic studies in endangered species: as demonstrated for a critically endangered forest bird endemic to Réunion Island, the Réunion cuckooshrike (Coracina newtoni)
Genetic data are increasingly recognized for their utility in conservation programs. However, many endangered species belong to families that have been understudied. Due to the urgency of their conservation status it is important to quickly identify polymorphic microsatellite loci from available res...
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| Veröffentlicht in: | Conservation genetics resources 2010-09, Vol.2 (Suppl 1), p.361-364 |
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| container_issue | Suppl 1 |
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| container_title | Conservation genetics resources |
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| creator | Salmona, Jordi Dawson, Deborah A. Fouillot, Damien Ghestemme, Thomas Thebaud, Christophe Chikhi, Lounès Salamolard, Marc |
| description | Genetic data are increasingly recognized for their utility in conservation programs. However, many endangered species belong to families that have been understudied. Due to the urgency of their conservation status it is important to quickly identify polymorphic microsatellite loci from available resources. We show for the Réunion Cuckoo shrike
Coracina newtoni
, that this strategy can be very useful. Using 110 passerine microsatellite primer sets we identified eighteen polymorphic loci and tested them in 25
C
.
newtoni
individuals. Following a Bonferroni correction one pair of loci displayed linkage disequilibrium (
P
-value |
| doi_str_mv | 10.1007/s12686-010-9254-x |
| format | Article |
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Coracina newtoni
, that this strategy can be very useful. Using 110 passerine microsatellite primer sets we identified eighteen polymorphic loci and tested them in 25
C
.
newtoni
individuals. Following a Bonferroni correction one pair of loci displayed linkage disequilibrium (
P
-value < 0.0001).</description><identifier>ISSN: 1877-7252</identifier><identifier>EISSN: 1877-7260</identifier><identifier>DOI: 10.1007/s12686-010-9254-x</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Animal Genetics and Genomics ; Biodiversity ; Biomedical and Life Sciences ; Conservation ; Conservation Biology/Ecology ; Conservation status ; Coracina newtoni ; Ecology ; Endangered & extinct species ; Endangered species ; Evolutionary Biology ; Genetic markers ; Life Sciences ; Linkage disequilibrium ; Microsatellites ; Plant Genetics and Genomics ; Technical Note ; Wildlife conservation</subject><ispartof>Conservation genetics resources, 2010-09, Vol.2 (Suppl 1), p.361-364</ispartof><rights>Springer Science+Business Media B.V. 2010</rights><rights>Springer Science+Business Media B.V. 2010.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c393t-8b23878ed2084f0caf5c46576be05b05dca736d364c10e2691e2fb39a02a46753</citedby><cites>FETCH-LOGICAL-c393t-8b23878ed2084f0caf5c46576be05b05dca736d364c10e2691e2fb39a02a46753</cites><orcidid>0000-0002-1140-0718</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s12686-010-9254-x$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s12686-010-9254-x$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://hal.science/hal-00602003$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Salmona, Jordi</creatorcontrib><creatorcontrib>Dawson, Deborah A.</creatorcontrib><creatorcontrib>Fouillot, Damien</creatorcontrib><creatorcontrib>Ghestemme, Thomas</creatorcontrib><creatorcontrib>Thebaud, Christophe</creatorcontrib><creatorcontrib>Chikhi, Lounès</creatorcontrib><creatorcontrib>Salamolard, Marc</creatorcontrib><title>The utility of existing passerine microsatellite markers for genetic studies in endangered species: as demonstrated for a critically endangered forest bird endemic to Réunion Island, the Réunion cuckooshrike (Coracina newtoni)</title><title>Conservation genetics resources</title><addtitle>Conservation Genet Resour</addtitle><description>Genetic data are increasingly recognized for their utility in conservation programs. However, many endangered species belong to families that have been understudied. Due to the urgency of their conservation status it is important to quickly identify polymorphic microsatellite loci from available resources. We show for the Réunion Cuckoo shrike
Coracina newtoni
, that this strategy can be very useful. Using 110 passerine microsatellite primer sets we identified eighteen polymorphic loci and tested them in 25
C
.
newtoni
individuals. Following a Bonferroni correction one pair of loci displayed linkage disequilibrium (
P
-value < 0.0001).</description><subject>Animal Genetics and Genomics</subject><subject>Biodiversity</subject><subject>Biomedical and Life Sciences</subject><subject>Conservation</subject><subject>Conservation Biology/Ecology</subject><subject>Conservation status</subject><subject>Coracina newtoni</subject><subject>Ecology</subject><subject>Endangered & extinct species</subject><subject>Endangered species</subject><subject>Evolutionary Biology</subject><subject>Genetic markers</subject><subject>Life Sciences</subject><subject>Linkage disequilibrium</subject><subject>Microsatellites</subject><subject>Plant Genetics and Genomics</subject><subject>Technical Note</subject><subject>Wildlife conservation</subject><issn>1877-7252</issn><issn>1877-7260</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNp1Uc1u1DAYjBBIlMIDcPskLlQi4J_ESbhVK6CVVkJC5Ww59pddd1N7sR3YfSSeo6_SB8EhaOHCyfZ4Zvx5piheUvKWEtK8i5SJVpSEkrJjdVUeHhVntG2asmGCPD7ta_a0eBbjLSGi5YydFQ83W4Qp2dGmI_gB8GBjsm4DexUjBusQ7qwOPqqEYyblowo7DBEGH2CDDpPVENNkLEawDtAZ5TYY0EDco87oe1ARDN55F1PINua3VIEONmvVOB7_FeU7jAl6G8wMY34dkocv9z8nZ72D6zgqZ95AynOfQD3pnfdxG-wO4fXKB6WtU-DwR_LOXjwvngxqjPjiz3pefP344WZ1Va4_f7peXa5LzTueyrZnvG1aNIy01UC0GmpdiboRPZK6J7XRquHCcFFpSpCJjiIbet4pwlQlmpqfFxeL71aNch9sjuoovbLy6nItZyzHThgh_DvN3FcLdx_8tyl_Wd76Kbg8nmQVEV3uqpod6cKaK4gBh5MtJXIuXi7Fy1y8nIuXh6xhiyZm7pzqX-f_i34BvqS3og</recordid><startdate>20100901</startdate><enddate>20100901</enddate><creator>Salmona, Jordi</creator><creator>Dawson, Deborah A.</creator><creator>Fouillot, Damien</creator><creator>Ghestemme, Thomas</creator><creator>Thebaud, Christophe</creator><creator>Chikhi, Lounès</creator><creator>Salamolard, Marc</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><general>Springer</general><scope>AAYXX</scope><scope>CITATION</scope><scope>8FE</scope><scope>8FH</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>PHGZM</scope><scope>PHGZT</scope><scope>PKEHL</scope><scope>PQEST</scope><scope>PQGLB</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>1XC</scope><orcidid>https://orcid.org/0000-0002-1140-0718</orcidid></search><sort><creationdate>20100901</creationdate><title>The utility of existing passerine microsatellite markers for genetic studies in endangered species: as demonstrated for a critically endangered forest bird endemic to Réunion Island, the Réunion cuckooshrike (Coracina newtoni)</title><author>Salmona, Jordi ; Dawson, Deborah A. ; Fouillot, Damien ; Ghestemme, Thomas ; Thebaud, Christophe ; Chikhi, Lounès ; Salamolard, Marc</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c393t-8b23878ed2084f0caf5c46576be05b05dca736d364c10e2691e2fb39a02a46753</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Animal Genetics and Genomics</topic><topic>Biodiversity</topic><topic>Biomedical and Life Sciences</topic><topic>Conservation</topic><topic>Conservation Biology/Ecology</topic><topic>Conservation status</topic><topic>Coracina newtoni</topic><topic>Ecology</topic><topic>Endangered & extinct species</topic><topic>Endangered species</topic><topic>Evolutionary Biology</topic><topic>Genetic markers</topic><topic>Life Sciences</topic><topic>Linkage disequilibrium</topic><topic>Microsatellites</topic><topic>Plant Genetics and Genomics</topic><topic>Technical Note</topic><topic>Wildlife conservation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Salmona, Jordi</creatorcontrib><creatorcontrib>Dawson, Deborah A.</creatorcontrib><creatorcontrib>Fouillot, Damien</creatorcontrib><creatorcontrib>Ghestemme, Thomas</creatorcontrib><creatorcontrib>Thebaud, Christophe</creatorcontrib><creatorcontrib>Chikhi, Lounès</creatorcontrib><creatorcontrib>Salamolard, Marc</creatorcontrib><collection>CrossRef</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>ProQuest Central (New)</collection><collection>ProQuest One Academic (New)</collection><collection>ProQuest One Academic Middle East (New)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Applied & Life Sciences</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Conservation genetics resources</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Salmona, Jordi</au><au>Dawson, Deborah A.</au><au>Fouillot, Damien</au><au>Ghestemme, Thomas</au><au>Thebaud, Christophe</au><au>Chikhi, Lounès</au><au>Salamolard, Marc</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The utility of existing passerine microsatellite markers for genetic studies in endangered species: as demonstrated for a critically endangered forest bird endemic to Réunion Island, the Réunion cuckooshrike (Coracina newtoni)</atitle><jtitle>Conservation genetics resources</jtitle><stitle>Conservation Genet Resour</stitle><date>2010-09-01</date><risdate>2010</risdate><volume>2</volume><issue>Suppl 1</issue><spage>361</spage><epage>364</epage><pages>361-364</pages><issn>1877-7252</issn><eissn>1877-7260</eissn><abstract>Genetic data are increasingly recognized for their utility in conservation programs. However, many endangered species belong to families that have been understudied. Due to the urgency of their conservation status it is important to quickly identify polymorphic microsatellite loci from available resources. We show for the Réunion Cuckoo shrike
Coracina newtoni
, that this strategy can be very useful. Using 110 passerine microsatellite primer sets we identified eighteen polymorphic loci and tested them in 25
C
.
newtoni
individuals. Following a Bonferroni correction one pair of loci displayed linkage disequilibrium (
P
-value < 0.0001).</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s12686-010-9254-x</doi><tpages>4</tpages><orcidid>https://orcid.org/0000-0002-1140-0718</orcidid><oa>free_for_read</oa></addata></record> |
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| identifier | ISSN: 1877-7252 |
| ispartof | Conservation genetics resources, 2010-09, Vol.2 (Suppl 1), p.361-364 |
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| source | SpringerLink Journals |
| subjects | Animal Genetics and Genomics Biodiversity Biomedical and Life Sciences Conservation Conservation Biology/Ecology Conservation status Coracina newtoni Ecology Endangered & extinct species Endangered species Evolutionary Biology Genetic markers Life Sciences Linkage disequilibrium Microsatellites Plant Genetics and Genomics Technical Note Wildlife conservation |
| title | The utility of existing passerine microsatellite markers for genetic studies in endangered species: as demonstrated for a critically endangered forest bird endemic to Réunion Island, the Réunion cuckooshrike (Coracina newtoni) |
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