Lack of correlation between growth rate and sequence type among Cronobacter sakazakii
Species identification and growth rates for a collection of Cronobacter strains from clinical and non-clinical sources have been previously reported. However, advancements in DNA sequencing-based identification methods now allow for more accurate identification. Here we report the sequence types (ST...
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Veröffentlicht in: | Food microbiology 2023-05, Vol.111, p.104191, Article 104191 |
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description | Species identification and growth rates for a collection of Cronobacter strains from clinical and non-clinical sources have been previously reported. However, advancements in DNA sequencing-based identification methods now allow for more accurate identification. Here we report the sequence types (STs) for 24 strains of Cronobacter sakazakii and examine any possible correlation between sequence type and growth rate, which could influence risk through greater pathogen multiplication and reach of infectious doses during time between formula preparation and feeding.
The most common clonal complexes (CCs) identified were C. sakazakii CC1 and CC4. CC1 strains belonged to ST1 (n = 8) and ST391 (n = 1), while CC4 included ST4 (n = 4), ST255 (n = 1) and ST295 (n = 1). Three strains were found to belong to CC100 and two were found to belong to ST64. The remaining STs identified were represented by single strains. CC4 strains have a slightly not significant tendency for faster growth rates at 25 °C; however, the small sample size suggests that more strains need to be analysed to determine if this is a true result. In conclusion, the growth rates of C. sakazakii strains do not appear to be strongly correlated to ST.
•Growth rates of C. sakazakii strains do not appear to be strongly correlated to ST.•CC4 strains have a slightly not significant tendency for faster growth rate at 25 °C.•“Potential virulence” character did not impact growth rates. |
doi_str_mv | 10.1016/j.fm.2022.104191 |
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The most common clonal complexes (CCs) identified were C. sakazakii CC1 and CC4. CC1 strains belonged to ST1 (n = 8) and ST391 (n = 1), while CC4 included ST4 (n = 4), ST255 (n = 1) and ST295 (n = 1). Three strains were found to belong to CC100 and two were found to belong to ST64. The remaining STs identified were represented by single strains. CC4 strains have a slightly not significant tendency for faster growth rates at 25 °C; however, the small sample size suggests that more strains need to be analysed to determine if this is a true result. In conclusion, the growth rates of C. sakazakii strains do not appear to be strongly correlated to ST.
•Growth rates of C. sakazakii strains do not appear to be strongly correlated to ST.•CC4 strains have a slightly not significant tendency for faster growth rate at 25 °C.•“Potential virulence” character did not impact growth rates.</description><identifier>ISSN: 0740-0020</identifier><identifier>EISSN: 1095-9998</identifier><identifier>DOI: 10.1016/j.fm.2022.104191</identifier><identifier>PMID: 36681390</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Bacteriology ; Clonal complex ; Cronobacter sakazakii ; Cronobacter sakazakii - genetics ; Cronobacter sakazakii - growth & development ; DNA ; food microbiology ; Growth rate ; Infant formula ; Infant Formula - microbiology ; Life Sciences ; Microbiology and Parasitology ; MLST ; pathogens ; risk ; sample size ; Sequence Analysis, DNA ; species identification</subject><ispartof>Food microbiology, 2023-05, Vol.111, p.104191, Article 104191</ispartof><rights>2022 Elsevier Ltd</rights><rights>Copyright © 2022 Elsevier Ltd. All rights reserved.</rights><rights>Copyright</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c302t-d2dd40be81741e42f6d5eb1eee9f33fdde8e221cf62107007b9e523f0e171133</cites><orcidid>0000-0001-7062-2487</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0740002022002155$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,314,776,780,881,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36681390$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://anses.hal.science/anses-03921368$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Jackson, Emily E.</creatorcontrib><creatorcontrib>Gnanou Besse, Nathalie</creatorcontrib><creatorcontrib>Bennour Hennekinne, Rabeb</creatorcontrib><creatorcontrib>Ells, Timothy</creatorcontrib><creatorcontrib>Laurentie, Michel</creatorcontrib><creatorcontrib>Meheut, Thomas</creatorcontrib><creatorcontrib>Forsythe, Stephen J.</creatorcontrib><title>Lack of correlation between growth rate and sequence type among Cronobacter sakazakii</title><title>Food microbiology</title><addtitle>Food Microbiol</addtitle><description>Species identification and growth rates for a collection of Cronobacter strains from clinical and non-clinical sources have been previously reported. However, advancements in DNA sequencing-based identification methods now allow for more accurate identification. Here we report the sequence types (STs) for 24 strains of Cronobacter sakazakii and examine any possible correlation between sequence type and growth rate, which could influence risk through greater pathogen multiplication and reach of infectious doses during time between formula preparation and feeding.
The most common clonal complexes (CCs) identified were C. sakazakii CC1 and CC4. CC1 strains belonged to ST1 (n = 8) and ST391 (n = 1), while CC4 included ST4 (n = 4), ST255 (n = 1) and ST295 (n = 1). Three strains were found to belong to CC100 and two were found to belong to ST64. The remaining STs identified were represented by single strains. CC4 strains have a slightly not significant tendency for faster growth rates at 25 °C; however, the small sample size suggests that more strains need to be analysed to determine if this is a true result. In conclusion, the growth rates of C. sakazakii strains do not appear to be strongly correlated to ST.
•Growth rates of C. sakazakii strains do not appear to be strongly correlated to ST.•CC4 strains have a slightly not significant tendency for faster growth rate at 25 °C.•“Potential virulence” character did not impact growth rates.</description><subject>Bacteriology</subject><subject>Clonal complex</subject><subject>Cronobacter sakazakii</subject><subject>Cronobacter sakazakii - genetics</subject><subject>Cronobacter sakazakii - growth & development</subject><subject>DNA</subject><subject>food microbiology</subject><subject>Growth rate</subject><subject>Infant formula</subject><subject>Infant Formula - microbiology</subject><subject>Life Sciences</subject><subject>Microbiology and Parasitology</subject><subject>MLST</subject><subject>pathogens</subject><subject>risk</subject><subject>sample size</subject><subject>Sequence Analysis, DNA</subject><subject>species identification</subject><issn>0740-0020</issn><issn>1095-9998</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kEFv1DAQRi0Eokvhzgn5iISyzNhJNuZWrYAircSlnC3HHrfeTeLFzrYqvx6vUnrjNJrR-z5pHmPvEdYI2H7er_24FiBEWWtU-IKtEFRTKaW6l2wFmxoqAAEX7E3OewDERqrX7EK2bYdSwYr92hl74NFzG1OiwcwhTryn-YFo4rcpPsx3PJmZuJkcz_T7RJMlPj8ey2WM0y3fpjjF3tiZEs_mYP6YQwhv2StvhkzvnuYlu_n29WZ7Xe1-fv-xvdpVVoKYKyecq6GnDjc1Ui186xrqkYiUl9I7Rx0Jgda3AmEDsOkVNUJ6INwgSnnJPi21d2bQxxRGkx51NEFfX-20mTJlDVIJlG13j4X-uNDHFMsfedZjyJaGwUwUT1nLIqcryuqmoLCgNsWcE_nndgR9Nq_32o_6bF4v5kvkw1P7qR_JPQf-qS7AlwWgIuQ-UNLZhrNNFxLZWbsY_t_-FwrNkk8</recordid><startdate>20230501</startdate><enddate>20230501</enddate><creator>Jackson, Emily E.</creator><creator>Gnanou Besse, Nathalie</creator><creator>Bennour Hennekinne, Rabeb</creator><creator>Ells, Timothy</creator><creator>Laurentie, Michel</creator><creator>Meheut, Thomas</creator><creator>Forsythe, Stephen J.</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7S9</scope><scope>L.6</scope><scope>1XC</scope><orcidid>https://orcid.org/0000-0001-7062-2487</orcidid></search><sort><creationdate>20230501</creationdate><title>Lack of correlation between growth rate and sequence type among Cronobacter sakazakii</title><author>Jackson, Emily E. ; Gnanou Besse, Nathalie ; Bennour Hennekinne, Rabeb ; Ells, Timothy ; Laurentie, Michel ; Meheut, Thomas ; Forsythe, Stephen J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c302t-d2dd40be81741e42f6d5eb1eee9f33fdde8e221cf62107007b9e523f0e171133</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Bacteriology</topic><topic>Clonal complex</topic><topic>Cronobacter sakazakii</topic><topic>Cronobacter sakazakii - genetics</topic><topic>Cronobacter sakazakii - growth & development</topic><topic>DNA</topic><topic>food microbiology</topic><topic>Growth rate</topic><topic>Infant formula</topic><topic>Infant Formula - microbiology</topic><topic>Life Sciences</topic><topic>Microbiology and Parasitology</topic><topic>MLST</topic><topic>pathogens</topic><topic>risk</topic><topic>sample size</topic><topic>Sequence Analysis, DNA</topic><topic>species identification</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jackson, Emily E.</creatorcontrib><creatorcontrib>Gnanou Besse, Nathalie</creatorcontrib><creatorcontrib>Bennour Hennekinne, Rabeb</creatorcontrib><creatorcontrib>Ells, Timothy</creatorcontrib><creatorcontrib>Laurentie, Michel</creatorcontrib><creatorcontrib>Meheut, Thomas</creatorcontrib><creatorcontrib>Forsythe, Stephen J.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Food microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jackson, Emily E.</au><au>Gnanou Besse, Nathalie</au><au>Bennour Hennekinne, Rabeb</au><au>Ells, Timothy</au><au>Laurentie, Michel</au><au>Meheut, Thomas</au><au>Forsythe, Stephen J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Lack of correlation between growth rate and sequence type among Cronobacter sakazakii</atitle><jtitle>Food microbiology</jtitle><addtitle>Food Microbiol</addtitle><date>2023-05-01</date><risdate>2023</risdate><volume>111</volume><spage>104191</spage><pages>104191-</pages><artnum>104191</artnum><issn>0740-0020</issn><eissn>1095-9998</eissn><abstract>Species identification and growth rates for a collection of Cronobacter strains from clinical and non-clinical sources have been previously reported. However, advancements in DNA sequencing-based identification methods now allow for more accurate identification. Here we report the sequence types (STs) for 24 strains of Cronobacter sakazakii and examine any possible correlation between sequence type and growth rate, which could influence risk through greater pathogen multiplication and reach of infectious doses during time between formula preparation and feeding.
The most common clonal complexes (CCs) identified were C. sakazakii CC1 and CC4. CC1 strains belonged to ST1 (n = 8) and ST391 (n = 1), while CC4 included ST4 (n = 4), ST255 (n = 1) and ST295 (n = 1). Three strains were found to belong to CC100 and two were found to belong to ST64. The remaining STs identified were represented by single strains. CC4 strains have a slightly not significant tendency for faster growth rates at 25 °C; however, the small sample size suggests that more strains need to be analysed to determine if this is a true result. In conclusion, the growth rates of C. sakazakii strains do not appear to be strongly correlated to ST.
•Growth rates of C. sakazakii strains do not appear to be strongly correlated to ST.•CC4 strains have a slightly not significant tendency for faster growth rate at 25 °C.•“Potential virulence” character did not impact growth rates.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>36681390</pmid><doi>10.1016/j.fm.2022.104191</doi><orcidid>https://orcid.org/0000-0001-7062-2487</orcidid></addata></record> |
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subjects | Bacteriology Clonal complex Cronobacter sakazakii Cronobacter sakazakii - genetics Cronobacter sakazakii - growth & development DNA food microbiology Growth rate Infant formula Infant Formula - microbiology Life Sciences Microbiology and Parasitology MLST pathogens risk sample size Sequence Analysis, DNA species identification |
title | Lack of correlation between growth rate and sequence type among Cronobacter sakazakii |
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