Structural, Antioxidant, and Protein/DNA-Binding Properties of Sulfate-Coordinated Ni Ligand
The pyridoxal-semicarbazone (PLSC) ligand and its transition metal complexes have shown significant biological activity. In this contribution, a novel nickel(II)-PLSC complex, [Ni(PLSC)(SO[sub.4])(H[sub.2]O)[sub.2]], was obtained, and its structure was determined by X-ray crystallographic analysis,...
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creator | Jevtovic, Violeta Golubović, Luka Alshammari, Odeh A. O Alhar, Munirah Sulaiman Alanazi, Tahani Y. A Radulović, Aleksandra Nakarada, Đura Dimitrić Marković, Jasmina Rakić, Aleksandra Dimić, Dušan |
description | The pyridoxal-semicarbazone (PLSC) ligand and its transition metal complexes have shown significant biological activity. In this contribution, a novel nickel(II)-PLSC complex, [Ni(PLSC)(SO[sub.4])(H[sub.2]O)[sub.2]], was obtained, and its structure was determined by X-ray crystallographic analysis, FTIR, and UV-VIS spectroscopy. The sulfate ion is directly coordinated to the central metal ion. The intermolecular stabilization interactions were examined using Hirshfeld surface analysis. The crystal structure was optimized by a B3LYP functional using two pseudopotentials for nickel(II) (LanL2DZ and def2-TZVP) together with a 6-311++G(d,p) basis set for non-metallic atoms. The experimental and theoretical bond lengths and angles were compared, and the appropriate level of theory was determined. The stabilization interactions within the coordination sphere were investigated by the Quantum Theory of Atoms in Molecules (QTAIM). The antioxidant activity towards hydroxyl and ascorbyl radicals was measured by EPR spectroscopy. The interactions between Human Serum Albumin (HSA) and the complex were examined by spectrofluorimetric titration and a molecular docking study. The mechanism of binding to DNA was analyzed by complex fluorescence quenching, potassium iodide quenching, and ethidium bromide displacement studies in conjunction with molecular docking simulations. |
doi_str_mv | 10.3390/inorganics12110280 |
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O ; Alhar, Munirah Sulaiman ; Alanazi, Tahani Y. A ; Radulović, Aleksandra ; Nakarada, Đura ; Dimitrić Marković, Jasmina ; Rakić, Aleksandra ; Dimić, Dušan</creator><creatorcontrib>Jevtovic, Violeta ; Golubović, Luka ; Alshammari, Odeh A. O ; Alhar, Munirah Sulaiman ; Alanazi, Tahani Y. A ; Radulović, Aleksandra ; Nakarada, Đura ; Dimitrić Marković, Jasmina ; Rakić, Aleksandra ; Dimić, Dušan</creatorcontrib><description>The pyridoxal-semicarbazone (PLSC) ligand and its transition metal complexes have shown significant biological activity. In this contribution, a novel nickel(II)-PLSC complex, [Ni(PLSC)(SO[sub.4])(H[sub.2]O)[sub.2]], was obtained, and its structure was determined by X-ray crystallographic analysis, FTIR, and UV-VIS spectroscopy. The sulfate ion is directly coordinated to the central metal ion. The intermolecular stabilization interactions were examined using Hirshfeld surface analysis. The crystal structure was optimized by a B3LYP functional using two pseudopotentials for nickel(II) (LanL2DZ and def2-TZVP) together with a 6-311++G(d,p) basis set for non-metallic atoms. The experimental and theoretical bond lengths and angles were compared, and the appropriate level of theory was determined. The stabilization interactions within the coordination sphere were investigated by the Quantum Theory of Atoms in Molecules (QTAIM). The antioxidant activity towards hydroxyl and ascorbyl radicals was measured by EPR spectroscopy. The interactions between Human Serum Albumin (HSA) and the complex were examined by spectrofluorimetric titration and a molecular docking study. The mechanism of binding to DNA was analyzed by complex fluorescence quenching, potassium iodide quenching, and ethidium bromide displacement studies in conjunction with molecular docking simulations.</description><identifier>ISSN: 2304-6740</identifier><identifier>DOI: 10.3390/inorganics12110280</identifier><language>eng</language><publisher>MDPI AG</publisher><subject>Antioxidants ; Comparative analysis ; Crystals ; Diflunisal ; Hydrogen bonding ; Potassium iodide ; Spectrum analysis ; Structure ; Sulfates ; Transition metal compounds</subject><ispartof>Inorganics, 2024-11, Vol.12 (11)</ispartof><rights>COPYRIGHT 2024 MDPI AG</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,864,27924,27925</link.rule.ids></links><search><creatorcontrib>Jevtovic, Violeta</creatorcontrib><creatorcontrib>Golubović, Luka</creatorcontrib><creatorcontrib>Alshammari, Odeh A. 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The intermolecular stabilization interactions were examined using Hirshfeld surface analysis. The crystal structure was optimized by a B3LYP functional using two pseudopotentials for nickel(II) (LanL2DZ and def2-TZVP) together with a 6-311++G(d,p) basis set for non-metallic atoms. The experimental and theoretical bond lengths and angles were compared, and the appropriate level of theory was determined. The stabilization interactions within the coordination sphere were investigated by the Quantum Theory of Atoms in Molecules (QTAIM). The antioxidant activity towards hydroxyl and ascorbyl radicals was measured by EPR spectroscopy. The interactions between Human Serum Albumin (HSA) and the complex were examined by spectrofluorimetric titration and a molecular docking study. The mechanism of binding to DNA was analyzed by complex fluorescence quenching, potassium iodide quenching, and ethidium bromide displacement studies in conjunction with molecular docking simulations.</description><subject>Antioxidants</subject><subject>Comparative analysis</subject><subject>Crystals</subject><subject>Diflunisal</subject><subject>Hydrogen bonding</subject><subject>Potassium iodide</subject><subject>Spectrum analysis</subject><subject>Structure</subject><subject>Sulfates</subject><subject>Transition metal compounds</subject><issn>2304-6740</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid/><recordid>eNptTk1LAzEUzEHBUvsHPAW8dtuXvOxuelyrVqFUoT0KJeRjiWwTyabgzzeiBw--d3jDzLxhCLlhsEBcwdKHmHoVvB4ZZwy4hAsy4QiialoBV2Q2ju9QZsVQopyQt31OZ53PSQ1z2oXs46c3KuQ5VcHQ1xSz9WF5v-uqOx-MD_0392FT9nak0dH9eXAq22odYypygYbuPN36UsJck0unhtHOfu-UHB4fDuunavuyeV5326pvWlY1jcJaCmm4sLxtOWhRAyDXtZCcIVNcI6Bs6xaZtmjBaulQW8mFA84cTsntT2yvBnv0wcWclD75UR87ySQiCmDFtfjHVdbYk9cxWOcL_-fhC4Z1Y44</recordid><startdate>20241101</startdate><enddate>20241101</enddate><creator>Jevtovic, Violeta</creator><creator>Golubović, Luka</creator><creator>Alshammari, Odeh A. 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A</creatorcontrib><creatorcontrib>Radulović, Aleksandra</creatorcontrib><creatorcontrib>Nakarada, Đura</creatorcontrib><creatorcontrib>Dimitrić Marković, Jasmina</creatorcontrib><creatorcontrib>Rakić, Aleksandra</creatorcontrib><creatorcontrib>Dimić, Dušan</creatorcontrib><jtitle>Inorganics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jevtovic, Violeta</au><au>Golubović, Luka</au><au>Alshammari, Odeh A. O</au><au>Alhar, Munirah Sulaiman</au><au>Alanazi, Tahani Y. A</au><au>Radulović, Aleksandra</au><au>Nakarada, Đura</au><au>Dimitrić Marković, Jasmina</au><au>Rakić, Aleksandra</au><au>Dimić, Dušan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structural, Antioxidant, and Protein/DNA-Binding Properties of Sulfate-Coordinated Ni Ligand</atitle><jtitle>Inorganics</jtitle><date>2024-11-01</date><risdate>2024</risdate><volume>12</volume><issue>11</issue><issn>2304-6740</issn><abstract>The pyridoxal-semicarbazone (PLSC) ligand and its transition metal complexes have shown significant biological activity. In this contribution, a novel nickel(II)-PLSC complex, [Ni(PLSC)(SO[sub.4])(H[sub.2]O)[sub.2]], was obtained, and its structure was determined by X-ray crystallographic analysis, FTIR, and UV-VIS spectroscopy. The sulfate ion is directly coordinated to the central metal ion. The intermolecular stabilization interactions were examined using Hirshfeld surface analysis. The crystal structure was optimized by a B3LYP functional using two pseudopotentials for nickel(II) (LanL2DZ and def2-TZVP) together with a 6-311++G(d,p) basis set for non-metallic atoms. The experimental and theoretical bond lengths and angles were compared, and the appropriate level of theory was determined. The stabilization interactions within the coordination sphere were investigated by the Quantum Theory of Atoms in Molecules (QTAIM). The antioxidant activity towards hydroxyl and ascorbyl radicals was measured by EPR spectroscopy. The interactions between Human Serum Albumin (HSA) and the complex were examined by spectrofluorimetric titration and a molecular docking study. The mechanism of binding to DNA was analyzed by complex fluorescence quenching, potassium iodide quenching, and ethidium bromide displacement studies in conjunction with molecular docking simulations.</abstract><pub>MDPI AG</pub><doi>10.3390/inorganics12110280</doi></addata></record> |
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subjects | Antioxidants Comparative analysis Crystals Diflunisal Hydrogen bonding Potassium iodide Spectrum analysis Structure Sulfates Transition metal compounds |
title | Structural, Antioxidant, and Protein/DNA-Binding Properties of Sulfate-Coordinated Ni Ligand |
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