1,25-Dihydroxyvitamin D[sub.3] Suppresses Prognostic Survival Biomarkers Associated with Cell Cycle and Actin Organization in a Non-Malignant African American Prostate Cell Line
Vitamin D[sub.3] is a steroid hormone that has been shown to prevent tumor growth in prostate cells. Not having enough vitamin D[sub.3] in the blood has been linked to advanced prostate cancer and mortality, especially in African American men. We wanted to understand how vitamin D affected pathways...
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creator | Johnson, Jabril R Ma Yuan, Yate-Ching Woods-Burnham, Leanne Walker, Mya O Kobeissy, Firas Galloway, Dorothy Gaddy, Amani Oguejiofor, Chidinma Allen, Blake Lewis, Deyana Davis, Melissa B Kimbro, K. Sean Yates, Clayton C Murphy, Adam B Kittles, Rick A |
description | Vitamin D[sub.3] is a steroid hormone that has been shown to prevent tumor growth in prostate cells. Not having enough vitamin D[sub.3] in the blood has been linked to advanced prostate cancer and mortality, especially in African American men. We wanted to understand how vitamin D affected pathways that keep prostate cells from becoming cancerous, which could lead to new therapeutic targets and treatments, especially for African American men who tend to be more prone to being vitamin D deficient compared to European men. Here, we studied a non-cancerous African American prostate cell line treated with the active form of vitamin D with a concentration similar to what is found in the body for 24 h. Using RNA whole-transcriptome sequencing, we compared these treated cells with untreated cells to assess genes and pathways significantly changed due to treatment. We found that vitamin D affected the activity of 1601 genes, mainly suppressing pathways linked to prostate cell movement, growth, and viability. Only two genes, ANLN and ECT2, were strongly correlated with prostate cancer prognosis and patients tended to have better survival rates when these genes were less active. Furthermore, downregulation of ANLN and ECT2 was also shown to repress signaling pathways involved in prostate cell movement, growth, malignant transformation, and viability. Our results suggest that vitamin D decreases the activity of these genes and could be important for preventing prostate cancer, especially for African American men. This could lead to the development of new treatments targeting specific genes and pathways involved in prostate cancer growth. Vitamin D[sub.3] is a steroid hormone that confers anti-tumorigenic properties in prostate cells. Serum vitamin D[sub.3] deficiency has been associated with advanced prostate cancer (PCa), particularly affecting African American (AA) men. Therefore, elucidating the pleiotropic effects of vitamin D on signaling pathways, essential to maintaining non-malignancy, may provide additional drug targets to mitigate disparate outcomes for men with PCa, especially AA men. We conducted RNA sequencing on an AA non-malignant prostate cell line, RC-77N/E, comparing untreated cells to those treated with 10 nM of vitamin D[sub.3] metabolite, 1α,25(OH)[sub.2]D[sub.3], at 24 h. Differential gene expression analysis revealed 1601 significant genes affected by 1α,25(OH)[sub.2]D[sub.3] treatment. Pathway enrichment analysis predicted 1α,25(OH)[sub.2]D[su |
doi_str_mv | 10.3390/biology13050346 |
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Sean ; Yates, Clayton C ; Murphy, Adam B ; Kittles, Rick A</creator><creatorcontrib>Johnson, Jabril R ; Ma ; Yuan, Yate-Ching ; Woods-Burnham, Leanne ; Walker, Mya ; O ; Kobeissy, Firas ; Galloway, Dorothy ; Gaddy, Amani ; Oguejiofor, Chidinma ; Allen, Blake ; Lewis, Deyana ; Davis, Melissa B ; Kimbro, K. Sean ; Yates, Clayton C ; Murphy, Adam B ; Kittles, Rick A</creatorcontrib><description>Vitamin D[sub.3] is a steroid hormone that has been shown to prevent tumor growth in prostate cells. Not having enough vitamin D[sub.3] in the blood has been linked to advanced prostate cancer and mortality, especially in African American men. We wanted to understand how vitamin D affected pathways that keep prostate cells from becoming cancerous, which could lead to new therapeutic targets and treatments, especially for African American men who tend to be more prone to being vitamin D deficient compared to European men. Here, we studied a non-cancerous African American prostate cell line treated with the active form of vitamin D with a concentration similar to what is found in the body for 24 h. Using RNA whole-transcriptome sequencing, we compared these treated cells with untreated cells to assess genes and pathways significantly changed due to treatment. We found that vitamin D affected the activity of 1601 genes, mainly suppressing pathways linked to prostate cell movement, growth, and viability. Only two genes, ANLN and ECT2, were strongly correlated with prostate cancer prognosis and patients tended to have better survival rates when these genes were less active. Furthermore, downregulation of ANLN and ECT2 was also shown to repress signaling pathways involved in prostate cell movement, growth, malignant transformation, and viability. Our results suggest that vitamin D decreases the activity of these genes and could be important for preventing prostate cancer, especially for African American men. This could lead to the development of new treatments targeting specific genes and pathways involved in prostate cancer growth. Vitamin D[sub.3] is a steroid hormone that confers anti-tumorigenic properties in prostate cells. Serum vitamin D[sub.3] deficiency has been associated with advanced prostate cancer (PCa), particularly affecting African American (AA) men. Therefore, elucidating the pleiotropic effects of vitamin D on signaling pathways, essential to maintaining non-malignancy, may provide additional drug targets to mitigate disparate outcomes for men with PCa, especially AA men. We conducted RNA sequencing on an AA non-malignant prostate cell line, RC-77N/E, comparing untreated cells to those treated with 10 nM of vitamin D[sub.3] metabolite, 1α,25(OH)[sub.2]D[sub.3], at 24 h. Differential gene expression analysis revealed 1601 significant genes affected by 1α,25(OH)[sub.2]D[sub.3] treatment. Pathway enrichment analysis predicted 1α,25(OH)[sub.2]D[sub.3-] mediated repression of prostate cancer, cell proliferation, actin cytoskeletal, and actin-related signaling pathways (p < 0.05). Prioritizing genes with vitamin D response elements and associating expression levels with overall survival (OS) in The Cancer Genome Atlas Prostate Adenocarcinoma (TCGA PRAD) cohort, we identified ANLN (Anillin) and ECT2 (Epithelial Cell Transforming 2) as potential prognostic PCa biomarkers. Both genes were strongly correlated and significantly downregulated by 1α,25(OH)[sub.2]D[sub.3] treatment, where low expression was statistically associated with better overall survival outcomes in the TCGA PRAD public cohort. Increased ANLN and ECT2 mRNA gene expression was significantly associated with PCa, and Gleason scores using both the TCGA cohort (p < 0.05) and an AA non-malignant/tumor-matched cohort. Our findings suggest 1α,25(OH)[sub.2]D[sub.3] regulation of these biomarkers may be significant for PCa prevention. In addition, 1α,25(OH)[sub.2]D[sub.3] could be used as an adjuvant treatment targeting actin cytoskeleton signaling and actin cytoskeleton-related signaling pathways, particularly among AA men.</description><identifier>ISSN: 2079-7737</identifier><identifier>EISSN: 2079-7737</identifier><identifier>DOI: 10.3390/biology13050346</identifier><language>eng</language><publisher>MDPI AG</publisher><subject>Adjuvant treatment ; African Americans ; Alfacalcidol ; Calcifediol ; Cancer ; Development and progression ; Genes ; Medical colleges ; Muscle proteins ; Prevention ; Prostate cancer ; Scientific equipment and supplies industry ; Vitamin D</subject><ispartof>Biology (Basel, Switzerland), 2024-05, Vol.13 (5)</ispartof><rights>COPYRIGHT 2024 MDPI AG</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,860,27903,27904</link.rule.ids></links><search><creatorcontrib>Johnson, Jabril R</creatorcontrib><creatorcontrib>Ma</creatorcontrib><creatorcontrib>Yuan, Yate-Ching</creatorcontrib><creatorcontrib>Woods-Burnham, Leanne</creatorcontrib><creatorcontrib>Walker, Mya</creatorcontrib><creatorcontrib>O</creatorcontrib><creatorcontrib>Kobeissy, Firas</creatorcontrib><creatorcontrib>Galloway, Dorothy</creatorcontrib><creatorcontrib>Gaddy, Amani</creatorcontrib><creatorcontrib>Oguejiofor, Chidinma</creatorcontrib><creatorcontrib>Allen, Blake</creatorcontrib><creatorcontrib>Lewis, Deyana</creatorcontrib><creatorcontrib>Davis, Melissa B</creatorcontrib><creatorcontrib>Kimbro, K. Sean</creatorcontrib><creatorcontrib>Yates, Clayton C</creatorcontrib><creatorcontrib>Murphy, Adam B</creatorcontrib><creatorcontrib>Kittles, Rick A</creatorcontrib><title>1,25-Dihydroxyvitamin D[sub.3] Suppresses Prognostic Survival Biomarkers Associated with Cell Cycle and Actin Organization in a Non-Malignant African American Prostate Cell Line</title><title>Biology (Basel, Switzerland)</title><description>Vitamin D[sub.3] is a steroid hormone that has been shown to prevent tumor growth in prostate cells. Not having enough vitamin D[sub.3] in the blood has been linked to advanced prostate cancer and mortality, especially in African American men. We wanted to understand how vitamin D affected pathways that keep prostate cells from becoming cancerous, which could lead to new therapeutic targets and treatments, especially for African American men who tend to be more prone to being vitamin D deficient compared to European men. Here, we studied a non-cancerous African American prostate cell line treated with the active form of vitamin D with a concentration similar to what is found in the body for 24 h. Using RNA whole-transcriptome sequencing, we compared these treated cells with untreated cells to assess genes and pathways significantly changed due to treatment. We found that vitamin D affected the activity of 1601 genes, mainly suppressing pathways linked to prostate cell movement, growth, and viability. Only two genes, ANLN and ECT2, were strongly correlated with prostate cancer prognosis and patients tended to have better survival rates when these genes were less active. Furthermore, downregulation of ANLN and ECT2 was also shown to repress signaling pathways involved in prostate cell movement, growth, malignant transformation, and viability. Our results suggest that vitamin D decreases the activity of these genes and could be important for preventing prostate cancer, especially for African American men. This could lead to the development of new treatments targeting specific genes and pathways involved in prostate cancer growth. Vitamin D[sub.3] is a steroid hormone that confers anti-tumorigenic properties in prostate cells. Serum vitamin D[sub.3] deficiency has been associated with advanced prostate cancer (PCa), particularly affecting African American (AA) men. Therefore, elucidating the pleiotropic effects of vitamin D on signaling pathways, essential to maintaining non-malignancy, may provide additional drug targets to mitigate disparate outcomes for men with PCa, especially AA men. We conducted RNA sequencing on an AA non-malignant prostate cell line, RC-77N/E, comparing untreated cells to those treated with 10 nM of vitamin D[sub.3] metabolite, 1α,25(OH)[sub.2]D[sub.3], at 24 h. Differential gene expression analysis revealed 1601 significant genes affected by 1α,25(OH)[sub.2]D[sub.3] treatment. Pathway enrichment analysis predicted 1α,25(OH)[sub.2]D[sub.3-] mediated repression of prostate cancer, cell proliferation, actin cytoskeletal, and actin-related signaling pathways (p < 0.05). Prioritizing genes with vitamin D response elements and associating expression levels with overall survival (OS) in The Cancer Genome Atlas Prostate Adenocarcinoma (TCGA PRAD) cohort, we identified ANLN (Anillin) and ECT2 (Epithelial Cell Transforming 2) as potential prognostic PCa biomarkers. Both genes were strongly correlated and significantly downregulated by 1α,25(OH)[sub.2]D[sub.3] treatment, where low expression was statistically associated with better overall survival outcomes in the TCGA PRAD public cohort. Increased ANLN and ECT2 mRNA gene expression was significantly associated with PCa, and Gleason scores using both the TCGA cohort (p < 0.05) and an AA non-malignant/tumor-matched cohort. Our findings suggest 1α,25(OH)[sub.2]D[sub.3] regulation of these biomarkers may be significant for PCa prevention. In addition, 1α,25(OH)[sub.2]D[sub.3] could be used as an adjuvant treatment targeting actin cytoskeleton signaling and actin cytoskeleton-related signaling pathways, particularly among AA men.</description><subject>Adjuvant treatment</subject><subject>African Americans</subject><subject>Alfacalcidol</subject><subject>Calcifediol</subject><subject>Cancer</subject><subject>Development and progression</subject><subject>Genes</subject><subject>Medical colleges</subject><subject>Muscle proteins</subject><subject>Prevention</subject><subject>Prostate cancer</subject><subject>Scientific equipment and supplies industry</subject><subject>Vitamin D</subject><issn>2079-7737</issn><issn>2079-7737</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid/><recordid>eNptj01P3DAQhqOqSEXAuVdLvTaLYztxckyX8iFtAQluVYVmnXGYNrGR7d12-Vf8QyxtDxyYOcw7r2ae0RTF54ovpOz46Zr85MddJXnNpWo-FIeC667UWuqPb_Sn4iTG3zyH5qKRzWHxUn0VdXlGj7sh-H-7LSWYybGzn3GzXshf7G7z9BQwRozsNvjR-ZjIZDdsaQsT-0Z-hvAHQ2R9jN4QJBzYX0qPbInTxJY7MyEDN7DepMy9CSM4eoZE3rHcA7v2rvwBE40OXGK9DWTAsX7GvchHY8rQPW5FDo-LAwtTxJP_9ai4P_9-v7wsVzcXV8t-VY6NbstKdKgHKzuhamxq3oqKY5P_FtJaVFraegAr1hJa2SijrKoHsQbNu061KJU8Kr7ssSNM-EDO-hTAzBTNQ6-7WraVVG2eWrwzlXPAmYx3aCn7bxZeAR9mhCk</recordid><startdate>20240501</startdate><enddate>20240501</enddate><creator>Johnson, Jabril R</creator><creator>Ma</creator><creator>Yuan, Yate-Ching</creator><creator>Woods-Burnham, Leanne</creator><creator>Walker, Mya</creator><creator>O</creator><creator>Kobeissy, Firas</creator><creator>Galloway, Dorothy</creator><creator>Gaddy, Amani</creator><creator>Oguejiofor, Chidinma</creator><creator>Allen, Blake</creator><creator>Lewis, Deyana</creator><creator>Davis, Melissa B</creator><creator>Kimbro, K. Sean</creator><creator>Yates, Clayton C</creator><creator>Murphy, Adam B</creator><creator>Kittles, Rick A</creator><general>MDPI AG</general><scope/></search><sort><creationdate>20240501</creationdate><title>1,25-Dihydroxyvitamin D[sub.3] Suppresses Prognostic Survival Biomarkers Associated with Cell Cycle and Actin Organization in a Non-Malignant African American Prostate Cell Line</title><author>Johnson, Jabril R ; Ma ; Yuan, Yate-Ching ; Woods-Burnham, Leanne ; Walker, Mya ; O ; Kobeissy, Firas ; Galloway, Dorothy ; Gaddy, Amani ; Oguejiofor, Chidinma ; Allen, Blake ; Lewis, Deyana ; Davis, Melissa B ; Kimbro, K. Sean ; Yates, Clayton C ; Murphy, Adam B ; Kittles, Rick A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-g678-129e7df39245e6508210e600723ffe473f5daf2b3a8364c4f45d2ba709948e343</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Adjuvant treatment</topic><topic>African Americans</topic><topic>Alfacalcidol</topic><topic>Calcifediol</topic><topic>Cancer</topic><topic>Development and progression</topic><topic>Genes</topic><topic>Medical colleges</topic><topic>Muscle proteins</topic><topic>Prevention</topic><topic>Prostate cancer</topic><topic>Scientific equipment and supplies industry</topic><topic>Vitamin D</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Johnson, Jabril R</creatorcontrib><creatorcontrib>Ma</creatorcontrib><creatorcontrib>Yuan, Yate-Ching</creatorcontrib><creatorcontrib>Woods-Burnham, Leanne</creatorcontrib><creatorcontrib>Walker, Mya</creatorcontrib><creatorcontrib>O</creatorcontrib><creatorcontrib>Kobeissy, Firas</creatorcontrib><creatorcontrib>Galloway, Dorothy</creatorcontrib><creatorcontrib>Gaddy, Amani</creatorcontrib><creatorcontrib>Oguejiofor, Chidinma</creatorcontrib><creatorcontrib>Allen, Blake</creatorcontrib><creatorcontrib>Lewis, Deyana</creatorcontrib><creatorcontrib>Davis, Melissa B</creatorcontrib><creatorcontrib>Kimbro, K. Sean</creatorcontrib><creatorcontrib>Yates, Clayton C</creatorcontrib><creatorcontrib>Murphy, Adam B</creatorcontrib><creatorcontrib>Kittles, Rick A</creatorcontrib><jtitle>Biology (Basel, Switzerland)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Johnson, Jabril R</au><au>Ma</au><au>Yuan, Yate-Ching</au><au>Woods-Burnham, Leanne</au><au>Walker, Mya</au><au>O</au><au>Kobeissy, Firas</au><au>Galloway, Dorothy</au><au>Gaddy, Amani</au><au>Oguejiofor, Chidinma</au><au>Allen, Blake</au><au>Lewis, Deyana</au><au>Davis, Melissa B</au><au>Kimbro, K. Sean</au><au>Yates, Clayton C</au><au>Murphy, Adam B</au><au>Kittles, Rick A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>1,25-Dihydroxyvitamin D[sub.3] Suppresses Prognostic Survival Biomarkers Associated with Cell Cycle and Actin Organization in a Non-Malignant African American Prostate Cell Line</atitle><jtitle>Biology (Basel, Switzerland)</jtitle><date>2024-05-01</date><risdate>2024</risdate><volume>13</volume><issue>5</issue><issn>2079-7737</issn><eissn>2079-7737</eissn><abstract>Vitamin D[sub.3] is a steroid hormone that has been shown to prevent tumor growth in prostate cells. Not having enough vitamin D[sub.3] in the blood has been linked to advanced prostate cancer and mortality, especially in African American men. We wanted to understand how vitamin D affected pathways that keep prostate cells from becoming cancerous, which could lead to new therapeutic targets and treatments, especially for African American men who tend to be more prone to being vitamin D deficient compared to European men. Here, we studied a non-cancerous African American prostate cell line treated with the active form of vitamin D with a concentration similar to what is found in the body for 24 h. Using RNA whole-transcriptome sequencing, we compared these treated cells with untreated cells to assess genes and pathways significantly changed due to treatment. We found that vitamin D affected the activity of 1601 genes, mainly suppressing pathways linked to prostate cell movement, growth, and viability. Only two genes, ANLN and ECT2, were strongly correlated with prostate cancer prognosis and patients tended to have better survival rates when these genes were less active. Furthermore, downregulation of ANLN and ECT2 was also shown to repress signaling pathways involved in prostate cell movement, growth, malignant transformation, and viability. Our results suggest that vitamin D decreases the activity of these genes and could be important for preventing prostate cancer, especially for African American men. This could lead to the development of new treatments targeting specific genes and pathways involved in prostate cancer growth. Vitamin D[sub.3] is a steroid hormone that confers anti-tumorigenic properties in prostate cells. Serum vitamin D[sub.3] deficiency has been associated with advanced prostate cancer (PCa), particularly affecting African American (AA) men. Therefore, elucidating the pleiotropic effects of vitamin D on signaling pathways, essential to maintaining non-malignancy, may provide additional drug targets to mitigate disparate outcomes for men with PCa, especially AA men. We conducted RNA sequencing on an AA non-malignant prostate cell line, RC-77N/E, comparing untreated cells to those treated with 10 nM of vitamin D[sub.3] metabolite, 1α,25(OH)[sub.2]D[sub.3], at 24 h. Differential gene expression analysis revealed 1601 significant genes affected by 1α,25(OH)[sub.2]D[sub.3] treatment. Pathway enrichment analysis predicted 1α,25(OH)[sub.2]D[sub.3-] mediated repression of prostate cancer, cell proliferation, actin cytoskeletal, and actin-related signaling pathways (p < 0.05). Prioritizing genes with vitamin D response elements and associating expression levels with overall survival (OS) in The Cancer Genome Atlas Prostate Adenocarcinoma (TCGA PRAD) cohort, we identified ANLN (Anillin) and ECT2 (Epithelial Cell Transforming 2) as potential prognostic PCa biomarkers. Both genes were strongly correlated and significantly downregulated by 1α,25(OH)[sub.2]D[sub.3] treatment, where low expression was statistically associated with better overall survival outcomes in the TCGA PRAD public cohort. Increased ANLN and ECT2 mRNA gene expression was significantly associated with PCa, and Gleason scores using both the TCGA cohort (p < 0.05) and an AA non-malignant/tumor-matched cohort. Our findings suggest 1α,25(OH)[sub.2]D[sub.3] regulation of these biomarkers may be significant for PCa prevention. In addition, 1α,25(OH)[sub.2]D[sub.3] could be used as an adjuvant treatment targeting actin cytoskeleton signaling and actin cytoskeleton-related signaling pathways, particularly among AA men.</abstract><pub>MDPI AG</pub><doi>10.3390/biology13050346</doi></addata></record> |
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subjects | Adjuvant treatment African Americans Alfacalcidol Calcifediol Cancer Development and progression Genes Medical colleges Muscle proteins Prevention Prostate cancer Scientific equipment and supplies industry Vitamin D |
title | 1,25-Dihydroxyvitamin D[sub.3] Suppresses Prognostic Survival Biomarkers Associated with Cell Cycle and Actin Organization in a Non-Malignant African American Prostate Cell Line |
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