IPLAG1/I g.8795CT Mutation Regulates Early Body Weight in Hu Sheep by Weakening miR-139 Binding

Sheep birth and weaning weights indicate their growth and survival. Thus, identifying molecular genetic markers for early body weight is important in sheep breeding. Pleomorphic adenoma gene 1 (PLAG1) is important for regulating birth weight and body length in mammals; however, its relationship with...

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Veröffentlicht in:Genes 2023-02, Vol.14 (2)
Hauptverfasser: Wang, Yue, Li, Yin-xia, Zhang, Jun, Qian, Yong, Meng, Chun-hua, Zhong, Ji-feng, Cao, Shao-xian
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container_title Genes
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creator Wang, Yue
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Zhang, Jun
Qian, Yong
Meng, Chun-hua
Zhong, Ji-feng
Cao, Shao-xian
description Sheep birth and weaning weights indicate their growth and survival. Thus, identifying molecular genetic markers for early body weight is important in sheep breeding. Pleomorphic adenoma gene 1 (PLAG1) is important for regulating birth weight and body length in mammals; however, its relationship with sheep body weight remains unknown. Here, the 3′-untranslated region (3′-UTR) of the Hu sheep PLAG1 gene was cloned, single nucleotide polymorphisms (SNPs) were screened, genotype–early body weight relationships were analyzed, and the possible molecular mechanism was explored. PLAG1 3′-UTR sequences with five forms of base sequences plus poly(A) tails were detected in Hu sheep and the g.8795C>T mutation was identified. Luciferase reporter assay indicated that the g.8795C>T mutation influenced PLAG1 post-transcriptional activity. miRBase prediction showed that the g.8795C>T mutation was located in the miR-139 seed sequence binding region, and miR-139 overexpression significantly decreased both PLAG1-CC and PLAG1-TT activities. Moreover, the luciferase activity of PLAG1-CC was significantly lower than that of the PLAG1-TT, but miR-139 inhibition substantially increased both PLAG1-CC and PLAG1-TT luciferase activities, suggesting that PLAG1 is the target gene of miR-139. Thus, the g.8795C>T mutation upregulates PLAG1 expression by weakening its binding with miR-139, promoting PLAG1 expression, and increasing Hu sheep birth and weaning weights.
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Thus, identifying molecular genetic markers for early body weight is important in sheep breeding. Pleomorphic adenoma gene 1 (PLAG1) is important for regulating birth weight and body length in mammals; however, its relationship with sheep body weight remains unknown. Here, the 3′-untranslated region (3′-UTR) of the Hu sheep PLAG1 gene was cloned, single nucleotide polymorphisms (SNPs) were screened, genotype–early body weight relationships were analyzed, and the possible molecular mechanism was explored. PLAG1 3′-UTR sequences with five forms of base sequences plus poly(A) tails were detected in Hu sheep and the g.8795C&gt;T mutation was identified. Luciferase reporter assay indicated that the g.8795C&gt;T mutation influenced PLAG1 post-transcriptional activity. miRBase prediction showed that the g.8795C&gt;T mutation was located in the miR-139 seed sequence binding region, and miR-139 overexpression significantly decreased both PLAG1-CC and PLAG1-TT activities. Moreover, the luciferase activity of PLAG1-CC was significantly lower than that of the PLAG1-TT, but miR-139 inhibition substantially increased both PLAG1-CC and PLAG1-TT luciferase activities, suggesting that PLAG1 is the target gene of miR-139. Thus, the g.8795C&gt;T mutation upregulates PLAG1 expression by weakening its binding with miR-139, promoting PLAG1 expression, and increasing Hu sheep birth and weaning weights.</description><identifier>ISSN: 2073-4425</identifier><identifier>EISSN: 2073-4425</identifier><identifier>DOI: 10.3390/genes14020467</identifier><language>eng</language><publisher>MDPI AG</publisher><subject>Analysis ; Body weight ; DNA sequencing ; Genetic aspects ; Methods ; MicroRNA ; Nucleotide sequencing ; Physiological aspects ; Sheep ; Single nucleotide polymorphisms</subject><ispartof>Genes, 2023-02, Vol.14 (2)</ispartof><rights>COPYRIGHT 2023 MDPI AG</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids></links><search><creatorcontrib>Wang, Yue</creatorcontrib><creatorcontrib>Li, Yin-xia</creatorcontrib><creatorcontrib>Zhang, Jun</creatorcontrib><creatorcontrib>Qian, Yong</creatorcontrib><creatorcontrib>Meng, Chun-hua</creatorcontrib><creatorcontrib>Zhong, Ji-feng</creatorcontrib><creatorcontrib>Cao, Shao-xian</creatorcontrib><title>IPLAG1/I g.8795CT Mutation Regulates Early Body Weight in Hu Sheep by Weakening miR-139 Binding</title><title>Genes</title><description>Sheep birth and weaning weights indicate their growth and survival. Thus, identifying molecular genetic markers for early body weight is important in sheep breeding. Pleomorphic adenoma gene 1 (PLAG1) is important for regulating birth weight and body length in mammals; however, its relationship with sheep body weight remains unknown. Here, the 3′-untranslated region (3′-UTR) of the Hu sheep PLAG1 gene was cloned, single nucleotide polymorphisms (SNPs) were screened, genotype–early body weight relationships were analyzed, and the possible molecular mechanism was explored. PLAG1 3′-UTR sequences with five forms of base sequences plus poly(A) tails were detected in Hu sheep and the g.8795C&gt;T mutation was identified. Luciferase reporter assay indicated that the g.8795C&gt;T mutation influenced PLAG1 post-transcriptional activity. miRBase prediction showed that the g.8795C&gt;T mutation was located in the miR-139 seed sequence binding region, and miR-139 overexpression significantly decreased both PLAG1-CC and PLAG1-TT activities. 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Moreover, the luciferase activity of PLAG1-CC was significantly lower than that of the PLAG1-TT, but miR-139 inhibition substantially increased both PLAG1-CC and PLAG1-TT luciferase activities, suggesting that PLAG1 is the target gene of miR-139. Thus, the g.8795C&gt;T mutation upregulates PLAG1 expression by weakening its binding with miR-139, promoting PLAG1 expression, and increasing Hu sheep birth and weaning weights.</abstract><pub>MDPI AG</pub><doi>10.3390/genes14020467</doi></addata></record>
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source MDPI - Multidisciplinary Digital Publishing Institute; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; PubMed Central Open Access
subjects Analysis
Body weight
DNA sequencing
Genetic aspects
Methods
MicroRNA
Nucleotide sequencing
Physiological aspects
Sheep
Single nucleotide polymorphisms
title IPLAG1/I g.8795CT Mutation Regulates Early Body Weight in Hu Sheep by Weakening miR-139 Binding
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