Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO[sub.2]∙∙∙CH[sub.3]YCH[sub.3] Complexes
In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-ho...
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Veröffentlicht in: | International journal of molecular sciences 2023-11, Vol.24 (22) |
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creator | Lei, Fengying Liu, Qingyu Zhong, Yeshuang Cui, Xinai Yu, Jie Hu, Zuquan Feng, Gang Zeng, Zhu Lu, Tao |
description | In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-hole-type chalcogen∙∙∙chalcogen interactions are scarcely reported in the literature. Herein, the π-hole-type intermolecular chalcogen∙∙∙chalcogen interactions in the model complexes formed between XO[sub.2] (X = S, Se, Te) and CH[sub.3]YCH[sub.3] (Y = O, S, Se, Te) were systematically studied by using quantum chemical computations. The model complexes are stabilized via one primary X∙∙∙Y chalcogen bond (ChB) and the secondary C−H∙∙∙O hydrogen bonds. The binding energies of the studied complexes are in the range of −21.6~−60.4 kJ/mol. The X∙∙∙Y distances are significantly smaller than the sum of the van der Waals radii of the corresponding two atoms. The X∙∙∙Y ChBs in all the studied complexes except for the SO[sub.2]∙∙∙CH[sub.3]OCH[sub.3] complex are strong in strength and display a partial covalent character revealed by conducting the quantum theory of atoms in molecules (QTAIM), a non-covalent interaction plot (NCIplot), and natural bond orbital (NBO) analyses. The symmetry-adapted perturbation theory (SAPT) analysis discloses that the X∙∙∙Y ChBs are primarily dominated by the electrostatic component. |
doi_str_mv | 10.3390/ijms242216193 |
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fullrecord | <record><control><sourceid>gale</sourceid><recordid>TN_cdi_gale_infotracacademiconefile_A774321269</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A774321269</galeid><sourcerecordid>A774321269</sourcerecordid><originalsourceid>FETCH-gale_infotracacademiconefile_A7743212693</originalsourceid><addsrcrecordid>eNqVTkFOwzAQ9AEkCuXIfT-Q4NglUY4oAoULHNoDqKqQSTeJK8eu4o0EN458gQ_wHf7AS3ADKme0K-1odmdmGTtLeCxlzs_1pvNiJkSSJrk8YJMk4IjzNDtix95vOBdSXOQT9lG4bjuQIu2sMnBjvW5aAm3JAbUIt4qGHkHZNcypR9tQC64eV5-vUekMwuJli1C0ylSuQfv19v7TeyaYEvaq2kX44DyK7--WfniKxervvhwZuXrYI9g9Z_AZ_ZQd1sp4PP2dJyy-vloUZdQog4_a1o5CQqg1drpyFmsd-Mssm0mRiDSX_xZ8A_iqcDo</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO[sub.2]∙∙∙CH[sub.3]YCH[sub.3] Complexes</title><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>MDPI - Multidisciplinary Digital Publishing Institute</source><source>PubMed Central</source><creator>Lei, Fengying ; Liu, Qingyu ; Zhong, Yeshuang ; Cui, Xinai ; Yu, Jie ; Hu, Zuquan ; Feng, Gang ; Zeng, Zhu ; Lu, Tao</creator><creatorcontrib>Lei, Fengying ; Liu, Qingyu ; Zhong, Yeshuang ; Cui, Xinai ; Yu, Jie ; Hu, Zuquan ; Feng, Gang ; Zeng, Zhu ; Lu, Tao</creatorcontrib><description>In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-hole-type chalcogen∙∙∙chalcogen interactions are scarcely reported in the literature. Herein, the π-hole-type intermolecular chalcogen∙∙∙chalcogen interactions in the model complexes formed between XO[sub.2] (X = S, Se, Te) and CH[sub.3]YCH[sub.3] (Y = O, S, Se, Te) were systematically studied by using quantum chemical computations. The model complexes are stabilized via one primary X∙∙∙Y chalcogen bond (ChB) and the secondary C−H∙∙∙O hydrogen bonds. The binding energies of the studied complexes are in the range of −21.6~−60.4 kJ/mol. The X∙∙∙Y distances are significantly smaller than the sum of the van der Waals radii of the corresponding two atoms. The X∙∙∙Y ChBs in all the studied complexes except for the SO[sub.2]∙∙∙CH[sub.3]OCH[sub.3] complex are strong in strength and display a partial covalent character revealed by conducting the quantum theory of atoms in molecules (QTAIM), a non-covalent interaction plot (NCIplot), and natural bond orbital (NBO) analyses. The symmetry-adapted perturbation theory (SAPT) analysis discloses that the X∙∙∙Y ChBs are primarily dominated by the electrostatic component.</description><identifier>ISSN: 1422-0067</identifier><identifier>DOI: 10.3390/ijms242216193</identifier><language>eng</language><publisher>MDPI AG</publisher><subject>Bonds</subject><ispartof>International journal of molecular sciences, 2023-11, Vol.24 (22)</ispartof><rights>COPYRIGHT 2023 MDPI AG</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids></links><search><creatorcontrib>Lei, Fengying</creatorcontrib><creatorcontrib>Liu, Qingyu</creatorcontrib><creatorcontrib>Zhong, Yeshuang</creatorcontrib><creatorcontrib>Cui, Xinai</creatorcontrib><creatorcontrib>Yu, Jie</creatorcontrib><creatorcontrib>Hu, Zuquan</creatorcontrib><creatorcontrib>Feng, Gang</creatorcontrib><creatorcontrib>Zeng, Zhu</creatorcontrib><creatorcontrib>Lu, Tao</creatorcontrib><title>Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO[sub.2]∙∙∙CH[sub.3]YCH[sub.3] Complexes</title><title>International journal of molecular sciences</title><description>In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-hole-type chalcogen∙∙∙chalcogen interactions are scarcely reported in the literature. Herein, the π-hole-type intermolecular chalcogen∙∙∙chalcogen interactions in the model complexes formed between XO[sub.2] (X = S, Se, Te) and CH[sub.3]YCH[sub.3] (Y = O, S, Se, Te) were systematically studied by using quantum chemical computations. The model complexes are stabilized via one primary X∙∙∙Y chalcogen bond (ChB) and the secondary C−H∙∙∙O hydrogen bonds. The binding energies of the studied complexes are in the range of −21.6~−60.4 kJ/mol. The X∙∙∙Y distances are significantly smaller than the sum of the van der Waals radii of the corresponding two atoms. The X∙∙∙Y ChBs in all the studied complexes except for the SO[sub.2]∙∙∙CH[sub.3]OCH[sub.3] complex are strong in strength and display a partial covalent character revealed by conducting the quantum theory of atoms in molecules (QTAIM), a non-covalent interaction plot (NCIplot), and natural bond orbital (NBO) analyses. The symmetry-adapted perturbation theory (SAPT) analysis discloses that the X∙∙∙Y ChBs are primarily dominated by the electrostatic component.</description><subject>Bonds</subject><issn>1422-0067</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid/><recordid>eNqVTkFOwzAQ9AEkCuXIfT-Q4NglUY4oAoULHNoDqKqQSTeJK8eu4o0EN458gQ_wHf7AS3ADKme0K-1odmdmGTtLeCxlzs_1pvNiJkSSJrk8YJMk4IjzNDtix95vOBdSXOQT9lG4bjuQIu2sMnBjvW5aAm3JAbUIt4qGHkHZNcypR9tQC64eV5-vUekMwuJli1C0ylSuQfv19v7TeyaYEvaq2kX44DyK7--WfniKxervvhwZuXrYI9g9Z_AZ_ZQd1sp4PP2dJyy-vloUZdQog4_a1o5CQqg1drpyFmsd-Mssm0mRiDSX_xZ8A_iqcDo</recordid><startdate>20231101</startdate><enddate>20231101</enddate><creator>Lei, Fengying</creator><creator>Liu, Qingyu</creator><creator>Zhong, Yeshuang</creator><creator>Cui, Xinai</creator><creator>Yu, Jie</creator><creator>Hu, Zuquan</creator><creator>Feng, Gang</creator><creator>Zeng, Zhu</creator><creator>Lu, Tao</creator><general>MDPI AG</general><scope/></search><sort><creationdate>20231101</creationdate><title>Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO[sub.2]∙∙∙CH[sub.3]YCH[sub.3] Complexes</title><author>Lei, Fengying ; Liu, Qingyu ; Zhong, Yeshuang ; Cui, Xinai ; Yu, Jie ; Hu, Zuquan ; Feng, Gang ; Zeng, Zhu ; Lu, Tao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-gale_infotracacademiconefile_A7743212693</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Bonds</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lei, Fengying</creatorcontrib><creatorcontrib>Liu, Qingyu</creatorcontrib><creatorcontrib>Zhong, Yeshuang</creatorcontrib><creatorcontrib>Cui, Xinai</creatorcontrib><creatorcontrib>Yu, Jie</creatorcontrib><creatorcontrib>Hu, Zuquan</creatorcontrib><creatorcontrib>Feng, Gang</creatorcontrib><creatorcontrib>Zeng, Zhu</creatorcontrib><creatorcontrib>Lu, Tao</creatorcontrib><jtitle>International journal of molecular sciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lei, Fengying</au><au>Liu, Qingyu</au><au>Zhong, Yeshuang</au><au>Cui, Xinai</au><au>Yu, Jie</au><au>Hu, Zuquan</au><au>Feng, Gang</au><au>Zeng, Zhu</au><au>Lu, Tao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO[sub.2]∙∙∙CH[sub.3]YCH[sub.3] Complexes</atitle><jtitle>International journal of molecular sciences</jtitle><date>2023-11-01</date><risdate>2023</risdate><volume>24</volume><issue>22</issue><issn>1422-0067</issn><abstract>In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-hole-type chalcogen∙∙∙chalcogen interactions are scarcely reported in the literature. Herein, the π-hole-type intermolecular chalcogen∙∙∙chalcogen interactions in the model complexes formed between XO[sub.2] (X = S, Se, Te) and CH[sub.3]YCH[sub.3] (Y = O, S, Se, Te) were systematically studied by using quantum chemical computations. The model complexes are stabilized via one primary X∙∙∙Y chalcogen bond (ChB) and the secondary C−H∙∙∙O hydrogen bonds. The binding energies of the studied complexes are in the range of −21.6~−60.4 kJ/mol. The X∙∙∙Y distances are significantly smaller than the sum of the van der Waals radii of the corresponding two atoms. The X∙∙∙Y ChBs in all the studied complexes except for the SO[sub.2]∙∙∙CH[sub.3]OCH[sub.3] complex are strong in strength and display a partial covalent character revealed by conducting the quantum theory of atoms in molecules (QTAIM), a non-covalent interaction plot (NCIplot), and natural bond orbital (NBO) analyses. The symmetry-adapted perturbation theory (SAPT) analysis discloses that the X∙∙∙Y ChBs are primarily dominated by the electrostatic component.</abstract><pub>MDPI AG</pub><doi>10.3390/ijms242216193</doi></addata></record> |
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subjects | Bonds |
title | Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO[sub.2]∙∙∙CH[sub.3]YCH[sub.3] Complexes |
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