Development and validation of a set of six adaptable prognosis prediction
We aimed to develop an adaptable prognosis prediction model that could be applied at any time point during the treatment course for patients with cancer receiving chemotherapy, by applying time-series real-world big data. Between April 2004 and September 2014, 4,997 patients with cancer who had rece...
Gespeichert in:
Veröffentlicht in: | PloS one 2017-08, Vol.12 (8), p.e0183291 |
---|---|
Hauptverfasser: | , , , , , , , , , , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | |
---|---|
container_issue | 8 |
container_start_page | e0183291 |
container_title | PloS one |
container_volume | 12 |
creator | Uneno, Yu Taneishi, Kei Kanai, Masashi Okamoto, Kazuya Yamamoto, Yosuke Yoshioka, Akira Hiramoto, Shuji Nozaki, Akira Nishikawa, Yoshitaka Yamaguchi, Daisuke Tomono, Teruko Nakatsui, Masahiko Baba, Mika Morita, Tatsuya Matsumoto, Shigemi Kuroda, Tomohiro Okuno, Yasushi Muto, Manabu |
description | We aimed to develop an adaptable prognosis prediction model that could be applied at any time point during the treatment course for patients with cancer receiving chemotherapy, by applying time-series real-world big data. Between April 2004 and September 2014, 4,997 patients with cancer who had received systemic chemotherapy were registered in a prospective cohort database at the Kyoto University Hospital. Of these, 2,693 patients with a death record were eligible for inclusion and divided into training (n = 1,341) and test (n = 1,352) cohorts. In total, 3,471,521 laboratory data at 115,738 time points, representing 40 laboratory items [e.g., white blood cell counts and albumin (Alb) levels] that were monitored for 1 year before the death event were applied for constructing prognosis prediction models. All possible prediction models comprising three different items from 40 laboratory items (.sub.40 C.sub.3 = 9,880) were generated in the training cohort, and the model selection was performed in the test cohort. The fitness of the selected models was externally validated in the validation cohort from three independent settings. A prognosis prediction model utilizing Alb, lactate dehydrogenase, and neutrophils was selected based on a strong ability to predict death events within 1-6 months and a set of six prediction models corresponding to 1,2, 3, 4, 5, and 6 months was developed. The area under the curve (AUC) ranged from 0.852 for the 1 month model to 0.713 for the 6 month model. External validation supported the performance of these models. By applying time-series real-world big data, we successfully developed a set of six adaptable prognosis prediction models for patients with cancer receiving chemotherapy. |
doi_str_mv | 10.1371/journal.pone.0183291 |
format | Article |
fullrecord | <record><control><sourceid>gale</sourceid><recordid>TN_cdi_gale_incontextgauss_ISR_A501665496</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A501665496</galeid><sourcerecordid>A501665496</sourcerecordid><originalsourceid>FETCH-LOGICAL-g996-841a35e3b36e4ee3c0f455d0d82566e6c366d5632827f9860330d3e29fb67c153</originalsourceid><addsrcrecordid>eNqFz09LAzEQh-EgCtbqN_CQk-Bha5LZTHePpf5bKBS0eC3pZna7JSZLk5Z-fC16qCdP8x4efjCM3UoxkjCWD5uw23rjRn3wNBKyAFXKMzaQJagMlYDzk75kVzFuhNBQIA5Y9Uh7cqH_JJ-48ZbvjeusSV3wPDTc8EjpGLE7cGNNn8zKEe-3ofUhdvG7yHb1kV-zi8a4SDe_d8gWz0-L6Ws2m79U08ksa8sSsyKXBjTBCpByIqhFk2tthS2URiSsAdFqBFWocVMWKACEBVJls8JxLTUM2f3PbGscLTtfB5_okFqzi3FZvb8tJ1pIRJ2X-I-df_y1dyd2TcaldQxud3wtnsIvtA5tEQ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Development and validation of a set of six adaptable prognosis prediction</title><source>DOAJ Directory of Open Access Journals</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Public Library of Science (PLoS)</source><source>PubMed Central</source><source>Free Full-Text Journals in Chemistry</source><creator>Uneno, Yu ; Taneishi, Kei ; Kanai, Masashi ; Okamoto, Kazuya ; Yamamoto, Yosuke ; Yoshioka, Akira ; Hiramoto, Shuji ; Nozaki, Akira ; Nishikawa, Yoshitaka ; Yamaguchi, Daisuke ; Tomono, Teruko ; Nakatsui, Masahiko ; Baba, Mika ; Morita, Tatsuya ; Matsumoto, Shigemi ; Kuroda, Tomohiro ; Okuno, Yasushi ; Muto, Manabu</creator><creatorcontrib>Uneno, Yu ; Taneishi, Kei ; Kanai, Masashi ; Okamoto, Kazuya ; Yamamoto, Yosuke ; Yoshioka, Akira ; Hiramoto, Shuji ; Nozaki, Akira ; Nishikawa, Yoshitaka ; Yamaguchi, Daisuke ; Tomono, Teruko ; Nakatsui, Masahiko ; Baba, Mika ; Morita, Tatsuya ; Matsumoto, Shigemi ; Kuroda, Tomohiro ; Okuno, Yasushi ; Muto, Manabu</creatorcontrib><description>We aimed to develop an adaptable prognosis prediction model that could be applied at any time point during the treatment course for patients with cancer receiving chemotherapy, by applying time-series real-world big data. Between April 2004 and September 2014, 4,997 patients with cancer who had received systemic chemotherapy were registered in a prospective cohort database at the Kyoto University Hospital. Of these, 2,693 patients with a death record were eligible for inclusion and divided into training (n = 1,341) and test (n = 1,352) cohorts. In total, 3,471,521 laboratory data at 115,738 time points, representing 40 laboratory items [e.g., white blood cell counts and albumin (Alb) levels] that were monitored for 1 year before the death event were applied for constructing prognosis prediction models. All possible prediction models comprising three different items from 40 laboratory items (.sub.40 C.sub.3 = 9,880) were generated in the training cohort, and the model selection was performed in the test cohort. The fitness of the selected models was externally validated in the validation cohort from three independent settings. A prognosis prediction model utilizing Alb, lactate dehydrogenase, and neutrophils was selected based on a strong ability to predict death events within 1-6 months and a set of six prediction models corresponding to 1,2, 3, 4, 5, and 6 months was developed. The area under the curve (AUC) ranged from 0.852 for the 1 month model to 0.713 for the 6 month model. External validation supported the performance of these models. By applying time-series real-world big data, we successfully developed a set of six adaptable prognosis prediction models for patients with cancer receiving chemotherapy.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0183291</identifier><language>eng</language><publisher>Public Library of Science</publisher><subject>Albumin ; Analysis ; Big data ; Cancer ; Care and treatment ; Chemotherapy ; Health aspects ; Prognosis ; White blood cell count</subject><ispartof>PloS one, 2017-08, Vol.12 (8), p.e0183291</ispartof><rights>COPYRIGHT 2017 Public Library of Science</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,864,27924,27925</link.rule.ids></links><search><creatorcontrib>Uneno, Yu</creatorcontrib><creatorcontrib>Taneishi, Kei</creatorcontrib><creatorcontrib>Kanai, Masashi</creatorcontrib><creatorcontrib>Okamoto, Kazuya</creatorcontrib><creatorcontrib>Yamamoto, Yosuke</creatorcontrib><creatorcontrib>Yoshioka, Akira</creatorcontrib><creatorcontrib>Hiramoto, Shuji</creatorcontrib><creatorcontrib>Nozaki, Akira</creatorcontrib><creatorcontrib>Nishikawa, Yoshitaka</creatorcontrib><creatorcontrib>Yamaguchi, Daisuke</creatorcontrib><creatorcontrib>Tomono, Teruko</creatorcontrib><creatorcontrib>Nakatsui, Masahiko</creatorcontrib><creatorcontrib>Baba, Mika</creatorcontrib><creatorcontrib>Morita, Tatsuya</creatorcontrib><creatorcontrib>Matsumoto, Shigemi</creatorcontrib><creatorcontrib>Kuroda, Tomohiro</creatorcontrib><creatorcontrib>Okuno, Yasushi</creatorcontrib><creatorcontrib>Muto, Manabu</creatorcontrib><title>Development and validation of a set of six adaptable prognosis prediction</title><title>PloS one</title><description>We aimed to develop an adaptable prognosis prediction model that could be applied at any time point during the treatment course for patients with cancer receiving chemotherapy, by applying time-series real-world big data. Between April 2004 and September 2014, 4,997 patients with cancer who had received systemic chemotherapy were registered in a prospective cohort database at the Kyoto University Hospital. Of these, 2,693 patients with a death record were eligible for inclusion and divided into training (n = 1,341) and test (n = 1,352) cohorts. In total, 3,471,521 laboratory data at 115,738 time points, representing 40 laboratory items [e.g., white blood cell counts and albumin (Alb) levels] that were monitored for 1 year before the death event were applied for constructing prognosis prediction models. All possible prediction models comprising three different items from 40 laboratory items (.sub.40 C.sub.3 = 9,880) were generated in the training cohort, and the model selection was performed in the test cohort. The fitness of the selected models was externally validated in the validation cohort from three independent settings. A prognosis prediction model utilizing Alb, lactate dehydrogenase, and neutrophils was selected based on a strong ability to predict death events within 1-6 months and a set of six prediction models corresponding to 1,2, 3, 4, 5, and 6 months was developed. The area under the curve (AUC) ranged from 0.852 for the 1 month model to 0.713 for the 6 month model. External validation supported the performance of these models. By applying time-series real-world big data, we successfully developed a set of six adaptable prognosis prediction models for patients with cancer receiving chemotherapy.</description><subject>Albumin</subject><subject>Analysis</subject><subject>Big data</subject><subject>Cancer</subject><subject>Care and treatment</subject><subject>Chemotherapy</subject><subject>Health aspects</subject><subject>Prognosis</subject><subject>White blood cell count</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNqFz09LAzEQh-EgCtbqN_CQk-Bha5LZTHePpf5bKBS0eC3pZna7JSZLk5Z-fC16qCdP8x4efjCM3UoxkjCWD5uw23rjRn3wNBKyAFXKMzaQJagMlYDzk75kVzFuhNBQIA5Y9Uh7cqH_JJ-48ZbvjeusSV3wPDTc8EjpGLE7cGNNn8zKEe-3ofUhdvG7yHb1kV-zi8a4SDe_d8gWz0-L6Ws2m79U08ksa8sSsyKXBjTBCpByIqhFk2tthS2URiSsAdFqBFWocVMWKACEBVJls8JxLTUM2f3PbGscLTtfB5_okFqzi3FZvb8tJ1pIRJ2X-I-df_y1dyd2TcaldQxud3wtnsIvtA5tEQ</recordid><startdate>20170824</startdate><enddate>20170824</enddate><creator>Uneno, Yu</creator><creator>Taneishi, Kei</creator><creator>Kanai, Masashi</creator><creator>Okamoto, Kazuya</creator><creator>Yamamoto, Yosuke</creator><creator>Yoshioka, Akira</creator><creator>Hiramoto, Shuji</creator><creator>Nozaki, Akira</creator><creator>Nishikawa, Yoshitaka</creator><creator>Yamaguchi, Daisuke</creator><creator>Tomono, Teruko</creator><creator>Nakatsui, Masahiko</creator><creator>Baba, Mika</creator><creator>Morita, Tatsuya</creator><creator>Matsumoto, Shigemi</creator><creator>Kuroda, Tomohiro</creator><creator>Okuno, Yasushi</creator><creator>Muto, Manabu</creator><general>Public Library of Science</general><scope>IOV</scope><scope>ISR</scope></search><sort><creationdate>20170824</creationdate><title>Development and validation of a set of six adaptable prognosis prediction</title><author>Uneno, Yu ; Taneishi, Kei ; Kanai, Masashi ; Okamoto, Kazuya ; Yamamoto, Yosuke ; Yoshioka, Akira ; Hiramoto, Shuji ; Nozaki, Akira ; Nishikawa, Yoshitaka ; Yamaguchi, Daisuke ; Tomono, Teruko ; Nakatsui, Masahiko ; Baba, Mika ; Morita, Tatsuya ; Matsumoto, Shigemi ; Kuroda, Tomohiro ; Okuno, Yasushi ; Muto, Manabu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-g996-841a35e3b36e4ee3c0f455d0d82566e6c366d5632827f9860330d3e29fb67c153</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Albumin</topic><topic>Analysis</topic><topic>Big data</topic><topic>Cancer</topic><topic>Care and treatment</topic><topic>Chemotherapy</topic><topic>Health aspects</topic><topic>Prognosis</topic><topic>White blood cell count</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Uneno, Yu</creatorcontrib><creatorcontrib>Taneishi, Kei</creatorcontrib><creatorcontrib>Kanai, Masashi</creatorcontrib><creatorcontrib>Okamoto, Kazuya</creatorcontrib><creatorcontrib>Yamamoto, Yosuke</creatorcontrib><creatorcontrib>Yoshioka, Akira</creatorcontrib><creatorcontrib>Hiramoto, Shuji</creatorcontrib><creatorcontrib>Nozaki, Akira</creatorcontrib><creatorcontrib>Nishikawa, Yoshitaka</creatorcontrib><creatorcontrib>Yamaguchi, Daisuke</creatorcontrib><creatorcontrib>Tomono, Teruko</creatorcontrib><creatorcontrib>Nakatsui, Masahiko</creatorcontrib><creatorcontrib>Baba, Mika</creatorcontrib><creatorcontrib>Morita, Tatsuya</creatorcontrib><creatorcontrib>Matsumoto, Shigemi</creatorcontrib><creatorcontrib>Kuroda, Tomohiro</creatorcontrib><creatorcontrib>Okuno, Yasushi</creatorcontrib><creatorcontrib>Muto, Manabu</creatorcontrib><collection>Gale In Context: Opposing Viewpoints</collection><collection>Gale In Context: Science</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Uneno, Yu</au><au>Taneishi, Kei</au><au>Kanai, Masashi</au><au>Okamoto, Kazuya</au><au>Yamamoto, Yosuke</au><au>Yoshioka, Akira</au><au>Hiramoto, Shuji</au><au>Nozaki, Akira</au><au>Nishikawa, Yoshitaka</au><au>Yamaguchi, Daisuke</au><au>Tomono, Teruko</au><au>Nakatsui, Masahiko</au><au>Baba, Mika</au><au>Morita, Tatsuya</au><au>Matsumoto, Shigemi</au><au>Kuroda, Tomohiro</au><au>Okuno, Yasushi</au><au>Muto, Manabu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Development and validation of a set of six adaptable prognosis prediction</atitle><jtitle>PloS one</jtitle><date>2017-08-24</date><risdate>2017</risdate><volume>12</volume><issue>8</issue><spage>e0183291</spage><pages>e0183291-</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>We aimed to develop an adaptable prognosis prediction model that could be applied at any time point during the treatment course for patients with cancer receiving chemotherapy, by applying time-series real-world big data. Between April 2004 and September 2014, 4,997 patients with cancer who had received systemic chemotherapy were registered in a prospective cohort database at the Kyoto University Hospital. Of these, 2,693 patients with a death record were eligible for inclusion and divided into training (n = 1,341) and test (n = 1,352) cohorts. In total, 3,471,521 laboratory data at 115,738 time points, representing 40 laboratory items [e.g., white blood cell counts and albumin (Alb) levels] that were monitored for 1 year before the death event were applied for constructing prognosis prediction models. All possible prediction models comprising three different items from 40 laboratory items (.sub.40 C.sub.3 = 9,880) were generated in the training cohort, and the model selection was performed in the test cohort. The fitness of the selected models was externally validated in the validation cohort from three independent settings. A prognosis prediction model utilizing Alb, lactate dehydrogenase, and neutrophils was selected based on a strong ability to predict death events within 1-6 months and a set of six prediction models corresponding to 1,2, 3, 4, 5, and 6 months was developed. The area under the curve (AUC) ranged from 0.852 for the 1 month model to 0.713 for the 6 month model. External validation supported the performance of these models. By applying time-series real-world big data, we successfully developed a set of six adaptable prognosis prediction models for patients with cancer receiving chemotherapy.</abstract><pub>Public Library of Science</pub><doi>10.1371/journal.pone.0183291</doi><tpages>e0183291</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1932-6203 |
ispartof | PloS one, 2017-08, Vol.12 (8), p.e0183291 |
issn | 1932-6203 1932-6203 |
language | eng |
recordid | cdi_gale_incontextgauss_ISR_A501665496 |
source | DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Public Library of Science (PLoS); PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Albumin Analysis Big data Cancer Care and treatment Chemotherapy Health aspects Prognosis White blood cell count |
title | Development and validation of a set of six adaptable prognosis prediction |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-06T16%3A47%3A29IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Development%20and%20validation%20of%20a%20set%20of%20six%20adaptable%20prognosis%20prediction&rft.jtitle=PloS%20one&rft.au=Uneno,%20Yu&rft.date=2017-08-24&rft.volume=12&rft.issue=8&rft.spage=e0183291&rft.pages=e0183291-&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0183291&rft_dat=%3Cgale%3EA501665496%3C/gale%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rft_galeid=A501665496&rfr_iscdi=true |