De novo assembly of the Brown trout
The Brown trout is a salmonid species with a high commercial value in Europe. Life history and spawning behaviour include resident (Salmo trutta m. fario) and migratory (Salmo trutta m. trutta) ecotypes. The main objective is to apply RNA-seq technology in order to obtain a reference transcriptome o...
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| Veröffentlicht in: | BMC research notes 2020-11, Vol.13 (1) |
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| creator | Fibla, J Oromi, N Pascual-Pons, M Royo, J. L Palau, A Fibla, M |
| description | The Brown trout is a salmonid species with a high commercial value in Europe. Life history and spawning behaviour include resident (Salmo trutta m. fario) and migratory (Salmo trutta m. trutta) ecotypes. The main objective is to apply RNA-seq technology in order to obtain a reference transcriptome of two key tissues, brain and muscle, of the riverine trout Salmo trutta m. fario. Having a reference transcriptome of the resident form will complement genomic resources of salmonid species. |
| doi_str_mv | 10.1186/s13104-020-05351-4 |
| format | Article |
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Having a reference transcriptome of the resident form will complement genomic resources of salmonid species.</description><subject>Analysis</subject><subject>Behavior</subject><subject>Brown trout</subject><subject>Genetic aspects</subject><subject>Physiological aspects</subject><subject>RNA sequencing</subject><subject>Single nucleotide polymorphisms</subject><issn>1756-0500</issn><issn>1756-0500</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNpjYJAyNNAzNLQw0y82NDY0MNE1MDLQNTA1NjXUNWFi4DQ0NzUDcg0MWJDYHAxcxcVZBgZmhhYWhpwMyi6pCnn5ZfkKicXFqblJOZUK-WkKJRmpCk5F-eV5CiVF-aUlPAysaYk5xam8UJqbQdPNNcTZQzc9MSc1PjMvOT-vJLWiJD2xtLg43tM_LN7RzMTIyMLS0sTcmBS1AKKvOKI</recordid><startdate>20201102</startdate><enddate>20201102</enddate><creator>Fibla, J</creator><creator>Oromi, N</creator><creator>Pascual-Pons, M</creator><creator>Royo, J. 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The main objective is to apply RNA-seq technology in order to obtain a reference transcriptome of two key tissues, brain and muscle, of the riverine trout Salmo trutta m. fario. Having a reference transcriptome of the resident form will complement genomic resources of salmonid species.</abstract><pub>BioMed Central Ltd</pub><doi>10.1186/s13104-020-05351-4</doi></addata></record> |
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| source | DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; SpringerNature Journals; PubMed Central Open Access; Springer Nature OA Free Journals; PubMed Central |
| subjects | Analysis Behavior Brown trout Genetic aspects Physiological aspects RNA sequencing Single nucleotide polymorphisms |
| title | De novo assembly of the Brown trout |
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