Phylogenetics of entomopathogenic fungi isolated from the soils of different ecosystems
The entomopathogenic fungi were isolated from the soils of diverse sources i.e., forest, agricultural and urban lands belonging to different geographical locations. The phylogenetic analysis of the ITS1, ITS2 and 5.8S-rDNA sequences of entomopathogenic Paecilomyces spp. from different countries supp...
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Veröffentlicht in: | Pakistan journal of zoology 2011, Vol.43 (3), p.417-425 |
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creator | Fareed, S. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education) Feng-Liang, J. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education) Shun-Xiang, R. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education) |
description | The entomopathogenic fungi were isolated from the soils of diverse sources i.e., forest, agricultural and urban lands belonging to different geographical locations. The phylogenetic analysis of the ITS1, ITS2 and 5.8S-rDNA sequences of entomopathogenic Paecilomyces spp. from different countries support the polyphyletic character. In Hypocreales, four key ITS subgroups were found, i.e., Isaria fumosorosea, Paecilomyces marquandii, Paecilomyces lilacinus and Paecilomyces sp. All of the four foremost subgroups of the Hypocreales showed clear identification and division. One of the main subgroup showed distinctive characteristics as it showed the majority of P. marquandii, P. lilacinus and Paecilomyces sp. distant relatedness. In addition the genetic variability among the isolates of I. fumosorosea was assessed and compared with the strains from other countries; overall genetic variability among the isolates of different countries was observed that confirms the polymorphic nature of I. fumosorosea. The majority of the isolates of I. fumosorosea belonged to one of the closely related genotypes. The utmost genetic distance of 0.169% was observed between the strains of France and USA. This information provides an enhanced perceptive concerning the isolates of diverse countries with soil source. |
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(South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education) ; Feng-Liang, J. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education) ; Shun-Xiang, R. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</creator><creatorcontrib>Fareed, S. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education) ; Feng-Liang, J. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education) ; Shun-Xiang, R. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</creatorcontrib><description>The entomopathogenic fungi were isolated from the soils of diverse sources i.e., forest, agricultural and urban lands belonging to different geographical locations. The phylogenetic analysis of the ITS1, ITS2 and 5.8S-rDNA sequences of entomopathogenic Paecilomyces spp. from different countries support the polyphyletic character. In Hypocreales, four key ITS subgroups were found, i.e., Isaria fumosorosea, Paecilomyces marquandii, Paecilomyces lilacinus and Paecilomyces sp. All of the four foremost subgroups of the Hypocreales showed clear identification and division. One of the main subgroup showed distinctive characteristics as it showed the majority of P. marquandii, P. lilacinus and Paecilomyces sp. distant relatedness. In addition the genetic variability among the isolates of I. fumosorosea was assessed and compared with the strains from other countries; overall genetic variability among the isolates of different countries was observed that confirms the polymorphic nature of I. fumosorosea. The majority of the isolates of I. fumosorosea belonged to one of the closely related genotypes. The utmost genetic distance of 0.169% was observed between the strains of France and USA. This information provides an enhanced perceptive concerning the isolates of diverse countries with soil source.</description><identifier>ISSN: 0030-9923</identifier><language>eng</language><subject>DNA ; ENTOMOGENOUS FUNGI ; FOREST SOILS ; GENETIC VARIATION ; ISARIA ; ISOLATION ; PAECILOMYCES ; PCR ; PHYLOGENY ; SOIL</subject><ispartof>Pakistan journal of zoology, 2011, Vol.43 (3), p.417-425</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,4010</link.rule.ids></links><search><creatorcontrib>Fareed, S. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</creatorcontrib><creatorcontrib>Feng-Liang, J. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</creatorcontrib><creatorcontrib>Shun-Xiang, R. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</creatorcontrib><title>Phylogenetics of entomopathogenic fungi isolated from the soils of different ecosystems</title><title>Pakistan journal of zoology</title><description>The entomopathogenic fungi were isolated from the soils of diverse sources i.e., forest, agricultural and urban lands belonging to different geographical locations. The phylogenetic analysis of the ITS1, ITS2 and 5.8S-rDNA sequences of entomopathogenic Paecilomyces spp. from different countries support the polyphyletic character. In Hypocreales, four key ITS subgroups were found, i.e., Isaria fumosorosea, Paecilomyces marquandii, Paecilomyces lilacinus and Paecilomyces sp. All of the four foremost subgroups of the Hypocreales showed clear identification and division. One of the main subgroup showed distinctive characteristics as it showed the majority of P. marquandii, P. lilacinus and Paecilomyces sp. distant relatedness. In addition the genetic variability among the isolates of I. fumosorosea was assessed and compared with the strains from other countries; overall genetic variability among the isolates of different countries was observed that confirms the polymorphic nature of I. fumosorosea. The majority of the isolates of I. fumosorosea belonged to one of the closely related genotypes. The utmost genetic distance of 0.169% was observed between the strains of France and USA. This information provides an enhanced perceptive concerning the isolates of diverse countries with soil source.</description><subject>DNA</subject><subject>ENTOMOGENOUS FUNGI</subject><subject>FOREST SOILS</subject><subject>GENETIC VARIATION</subject><subject>ISARIA</subject><subject>ISOLATION</subject><subject>PAECILOMYCES</subject><subject>PCR</subject><subject>PHYLOGENY</subject><subject>SOIL</subject><issn>0030-9923</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNotj8tqwzAURLVooSHNJxT0A4ZrydZjGUJfNNAsUroMel1bwbaKpS7y93XTzmbgwBmYG7IC4FBpzfgd2eR8hiWNaBlTK_J56C9D6sIUSnSZJqRhKmlMX6b0vzg6it9TF2nMaTAleIpzGmnpA80pDlfDR8QwLx4NLuVLLmHM9-QWzZDD5r_X5OPp8bh7qfbvz6-77b7CWspSKaWCtS3UjhkHvtYcpAArJNZeoW649AhctKa1XujArFbGLbTx2FjpgK_Jw98umnQy3Rzz6fDGoGbXj4L_AGCUS2s</recordid><startdate>2011</startdate><enddate>2011</enddate><creator>Fareed, S. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</creator><creator>Feng-Liang, J. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</creator><creator>Shun-Xiang, R. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</creator><scope>FBQ</scope></search><sort><creationdate>2011</creationdate><title>Phylogenetics of entomopathogenic fungi isolated from the soils of different ecosystems</title><author>Fareed, S. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education) ; Feng-Liang, J. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education) ; Shun-Xiang, R. (South China Agricultural Univ., Guangzhou (China). 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Engineering Research Center of Biocontrol, Ministry of Education)</creatorcontrib><creatorcontrib>Shun-Xiang, R. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</creatorcontrib><collection>AGRIS</collection><jtitle>Pakistan journal of zoology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fareed, S. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</au><au>Feng-Liang, J. (South China Agricultural Univ., Guangzhou (China). Engineering Research Center of Biocontrol, Ministry of Education)</au><au>Shun-Xiang, R. (South China Agricultural Univ., Guangzhou (China). 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All of the four foremost subgroups of the Hypocreales showed clear identification and division. One of the main subgroup showed distinctive characteristics as it showed the majority of P. marquandii, P. lilacinus and Paecilomyces sp. distant relatedness. In addition the genetic variability among the isolates of I. fumosorosea was assessed and compared with the strains from other countries; overall genetic variability among the isolates of different countries was observed that confirms the polymorphic nature of I. fumosorosea. The majority of the isolates of I. fumosorosea belonged to one of the closely related genotypes. The utmost genetic distance of 0.169% was observed between the strains of France and USA. This information provides an enhanced perceptive concerning the isolates of diverse countries with soil source.</abstract><tpages>9</tpages></addata></record> |
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subjects | DNA ENTOMOGENOUS FUNGI FOREST SOILS GENETIC VARIATION ISARIA ISOLATION PAECILOMYCES PCR PHYLOGENY SOIL |
title | Phylogenetics of entomopathogenic fungi isolated from the soils of different ecosystems |
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