TILE LOCATION AND/OR CYCLE BASED WEIGHT SET SELECTION FOR BASE CALLING
A system for base calling includes memory storing a topology of a neural network, a plurality of weights sets, and sensor data for a series of sensing cycles. Sequencing events span temporal progression of the base calling operation through subseries of sensing cycles, and spatial progression of the...
Gespeichert in:
Hauptverfasser: | , , , , |
---|---|
Format: | Patent |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext bestellen |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | |
---|---|
container_issue | |
container_start_page | |
container_title | |
container_volume | |
creator | KASHEAGHIGHI, Dorna PARNABY, Gavin Derek JAGANATHAN, Kishore DU PREEZ, Andrew Christopher HAHM, Mark David |
description | A system for base calling includes memory storing a topology of a neural network, a plurality of weights sets, and sensor data for a series of sensing cycles. Sequencing events span temporal progression of the base calling operation through subseries of sensing cycles, and spatial progression of the base calling operation through locations on a biosensor. A configurable processor is configured to load the topology on the configurable processor, select a weight set in dependence upon a subject subseries of sensing cycles and/or a subject location on the biosensor, load subject sensor data for the subject subseries of sensing cycles and the subject location on the processing elements, configure the topology using the selected weight set, and cause the neural network to process the subject sensor data to produce base call classification data for the subject subseries and the subject location. |
format | Patent |
fullrecord | <record><control><sourceid>epo_EVB</sourceid><recordid>TN_cdi_epo_espacenet_US2022301657A1</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>US2022301657A1</sourcerecordid><originalsourceid>FETCH-epo_espacenet_US2022301657A13</originalsourceid><addsrcrecordid>eNrjZHAL8fRxVfDxd3YM8fT3U3D0c9H3D1JwjnQGijo5Bru6KIS7erp7hCgEu4Kwj6szWJ0bUBFIWsHZ0cfH08-dh4E1LTGnOJUXSnMzKLu5hjh76KYW5MenFhckJqfmpZbEhwYbGRgZGRsYmpmaOxoaE6cKABlnLKg</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>patent</recordtype></control><display><type>patent</type><title>TILE LOCATION AND/OR CYCLE BASED WEIGHT SET SELECTION FOR BASE CALLING</title><source>esp@cenet</source><creator>KASHEAGHIGHI, Dorna ; PARNABY, Gavin Derek ; JAGANATHAN, Kishore ; DU PREEZ, Andrew Christopher ; HAHM, Mark David</creator><creatorcontrib>KASHEAGHIGHI, Dorna ; PARNABY, Gavin Derek ; JAGANATHAN, Kishore ; DU PREEZ, Andrew Christopher ; HAHM, Mark David</creatorcontrib><description>A system for base calling includes memory storing a topology of a neural network, a plurality of weights sets, and sensor data for a series of sensing cycles. Sequencing events span temporal progression of the base calling operation through subseries of sensing cycles, and spatial progression of the base calling operation through locations on a biosensor. A configurable processor is configured to load the topology on the configurable processor, select a weight set in dependence upon a subject subseries of sensing cycles and/or a subject location on the biosensor, load subject sensor data for the subject subseries of sensing cycles and the subject location on the processing elements, configure the topology using the selected weight set, and cause the neural network to process the subject sensor data to produce base call classification data for the subject subseries and the subject location.</description><language>eng</language><subject>CALCULATING ; COMPUTER SYSTEMS BASED ON SPECIFIC COMPUTATIONAL MODELS ; COMPUTING ; COUNTING ; INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTEDFOR SPECIFIC APPLICATION FIELDS ; PHYSICS</subject><creationdate>2022</creationdate><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://worldwide.espacenet.com/publicationDetails/biblio?FT=D&date=20220922&DB=EPODOC&CC=US&NR=2022301657A1$$EHTML$$P50$$Gepo$$Hfree_for_read</linktohtml><link.rule.ids>230,308,780,885,25564,76547</link.rule.ids><linktorsrc>$$Uhttps://worldwide.espacenet.com/publicationDetails/biblio?FT=D&date=20220922&DB=EPODOC&CC=US&NR=2022301657A1$$EView_record_in_European_Patent_Office$$FView_record_in_$$GEuropean_Patent_Office$$Hfree_for_read</linktorsrc></links><search><creatorcontrib>KASHEAGHIGHI, Dorna</creatorcontrib><creatorcontrib>PARNABY, Gavin Derek</creatorcontrib><creatorcontrib>JAGANATHAN, Kishore</creatorcontrib><creatorcontrib>DU PREEZ, Andrew Christopher</creatorcontrib><creatorcontrib>HAHM, Mark David</creatorcontrib><title>TILE LOCATION AND/OR CYCLE BASED WEIGHT SET SELECTION FOR BASE CALLING</title><description>A system for base calling includes memory storing a topology of a neural network, a plurality of weights sets, and sensor data for a series of sensing cycles. Sequencing events span temporal progression of the base calling operation through subseries of sensing cycles, and spatial progression of the base calling operation through locations on a biosensor. A configurable processor is configured to load the topology on the configurable processor, select a weight set in dependence upon a subject subseries of sensing cycles and/or a subject location on the biosensor, load subject sensor data for the subject subseries of sensing cycles and the subject location on the processing elements, configure the topology using the selected weight set, and cause the neural network to process the subject sensor data to produce base call classification data for the subject subseries and the subject location.</description><subject>CALCULATING</subject><subject>COMPUTER SYSTEMS BASED ON SPECIFIC COMPUTATIONAL MODELS</subject><subject>COMPUTING</subject><subject>COUNTING</subject><subject>INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTEDFOR SPECIFIC APPLICATION FIELDS</subject><subject>PHYSICS</subject><fulltext>true</fulltext><rsrctype>patent</rsrctype><creationdate>2022</creationdate><recordtype>patent</recordtype><sourceid>EVB</sourceid><recordid>eNrjZHAL8fRxVfDxd3YM8fT3U3D0c9H3D1JwjnQGijo5Bru6KIS7erp7hCgEu4Kwj6szWJ0bUBFIWsHZ0cfH08-dh4E1LTGnOJUXSnMzKLu5hjh76KYW5MenFhckJqfmpZbEhwYbGRgZGRsYmpmaOxoaE6cKABlnLKg</recordid><startdate>20220922</startdate><enddate>20220922</enddate><creator>KASHEAGHIGHI, Dorna</creator><creator>PARNABY, Gavin Derek</creator><creator>JAGANATHAN, Kishore</creator><creator>DU PREEZ, Andrew Christopher</creator><creator>HAHM, Mark David</creator><scope>EVB</scope></search><sort><creationdate>20220922</creationdate><title>TILE LOCATION AND/OR CYCLE BASED WEIGHT SET SELECTION FOR BASE CALLING</title><author>KASHEAGHIGHI, Dorna ; PARNABY, Gavin Derek ; JAGANATHAN, Kishore ; DU PREEZ, Andrew Christopher ; HAHM, Mark David</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-epo_espacenet_US2022301657A13</frbrgroupid><rsrctype>patents</rsrctype><prefilter>patents</prefilter><language>eng</language><creationdate>2022</creationdate><topic>CALCULATING</topic><topic>COMPUTER SYSTEMS BASED ON SPECIFIC COMPUTATIONAL MODELS</topic><topic>COMPUTING</topic><topic>COUNTING</topic><topic>INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTEDFOR SPECIFIC APPLICATION FIELDS</topic><topic>PHYSICS</topic><toplevel>online_resources</toplevel><creatorcontrib>KASHEAGHIGHI, Dorna</creatorcontrib><creatorcontrib>PARNABY, Gavin Derek</creatorcontrib><creatorcontrib>JAGANATHAN, Kishore</creatorcontrib><creatorcontrib>DU PREEZ, Andrew Christopher</creatorcontrib><creatorcontrib>HAHM, Mark David</creatorcontrib><collection>esp@cenet</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>KASHEAGHIGHI, Dorna</au><au>PARNABY, Gavin Derek</au><au>JAGANATHAN, Kishore</au><au>DU PREEZ, Andrew Christopher</au><au>HAHM, Mark David</au><format>patent</format><genre>patent</genre><ristype>GEN</ristype><title>TILE LOCATION AND/OR CYCLE BASED WEIGHT SET SELECTION FOR BASE CALLING</title><date>2022-09-22</date><risdate>2022</risdate><abstract>A system for base calling includes memory storing a topology of a neural network, a plurality of weights sets, and sensor data for a series of sensing cycles. Sequencing events span temporal progression of the base calling operation through subseries of sensing cycles, and spatial progression of the base calling operation through locations on a biosensor. A configurable processor is configured to load the topology on the configurable processor, select a weight set in dependence upon a subject subseries of sensing cycles and/or a subject location on the biosensor, load subject sensor data for the subject subseries of sensing cycles and the subject location on the processing elements, configure the topology using the selected weight set, and cause the neural network to process the subject sensor data to produce base call classification data for the subject subseries and the subject location.</abstract><oa>free_for_read</oa></addata></record> |
fulltext | fulltext_linktorsrc |
identifier | |
ispartof | |
issn | |
language | eng |
recordid | cdi_epo_espacenet_US2022301657A1 |
source | esp@cenet |
subjects | CALCULATING COMPUTER SYSTEMS BASED ON SPECIFIC COMPUTATIONAL MODELS COMPUTING COUNTING INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTEDFOR SPECIFIC APPLICATION FIELDS PHYSICS |
title | TILE LOCATION AND/OR CYCLE BASED WEIGHT SET SELECTION FOR BASE CALLING |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-03T10%3A55%3A05IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-epo_EVB&rft_val_fmt=info:ofi/fmt:kev:mtx:patent&rft.genre=patent&rft.au=KASHEAGHIGHI,%20Dorna&rft.date=2022-09-22&rft_id=info:doi/&rft_dat=%3Cepo_EVB%3EUS2022301657A1%3C/epo_EVB%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true |