End-to-End Attention Pooling-Based Classification Method for Histopathology Images
The present disclosure provides an end-to-end attention pooling-based classification method for histopathological images. The method specifically includes the following steps: S1, cutting the histopathology image into patches of a specified size, removing the patches with too much background area an...
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creator | Chen, Yuqi Feng, Jing Zuo, Zhiqun Li, Zhuoyu Liu, Juan |
description | The present disclosure provides an end-to-end attention pooling-based classification method for histopathological images. The method specifically includes the following steps: S1, cutting the histopathology image into patches of a specified size, removing the patches with too much background area and packaging the remaining patches into a bag; S2, training a deep learning network by taking the bag obtained in S1 as an input using a standard multi-instance learning method; S3, scoring all the patches by using the trained deep learning network, and selecting m patches with highest and lowest scores for each whole slide image to form a new bag; S4, building a deep learning network including an attention pooling module, and training the network by using the new bag obtained in S3; and S5, after the histopathology image to be classified is processed in S1 and S3, performing classification by using the model obtained in S4. The present disclosure can obtain a better classification effect under the current situation of only a small number of samples, provide an auxiliary diagnosis mechanism for doctors, and alleviate the problem of shortage of medical resources. |
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The method specifically includes the following steps: S1, cutting the histopathology image into patches of a specified size, removing the patches with too much background area and packaging the remaining patches into a bag; S2, training a deep learning network by taking the bag obtained in S1 as an input using a standard multi-instance learning method; S3, scoring all the patches by using the trained deep learning network, and selecting m patches with highest and lowest scores for each whole slide image to form a new bag; S4, building a deep learning network including an attention pooling module, and training the network by using the new bag obtained in S3; and S5, after the histopathology image to be classified is processed in S1 and S3, performing classification by using the model obtained in S4. The present disclosure can obtain a better classification effect under the current situation of only a small number of samples, provide an auxiliary diagnosis mechanism for doctors, and alleviate the problem of shortage of medical resources.</description><language>eng</language><subject>CALCULATING ; COMPUTER SYSTEMS BASED ON SPECIFIC COMPUTATIONAL MODELS ; COMPUTING ; COUNTING ; HANDLING RECORD CARRIERS ; IMAGE DATA PROCESSING OR GENERATION, IN GENERAL ; PHYSICS ; PRESENTATION OF DATA ; RECOGNITION OF DATA ; RECORD CARRIERS</subject><creationdate>2022</creationdate><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://worldwide.espacenet.com/publicationDetails/biblio?FT=D&date=20220616&DB=EPODOC&CC=US&NR=2022188573A1$$EHTML$$P50$$Gepo$$Hfree_for_read</linktohtml><link.rule.ids>230,308,776,881,25542,76290</link.rule.ids><linktorsrc>$$Uhttps://worldwide.espacenet.com/publicationDetails/biblio?FT=D&date=20220616&DB=EPODOC&CC=US&NR=2022188573A1$$EView_record_in_European_Patent_Office$$FView_record_in_$$GEuropean_Patent_Office$$Hfree_for_read</linktorsrc></links><search><creatorcontrib>Chen, Yuqi</creatorcontrib><creatorcontrib>Feng, Jing</creatorcontrib><creatorcontrib>Zuo, Zhiqun</creatorcontrib><creatorcontrib>Li, Zhuoyu</creatorcontrib><creatorcontrib>Liu, Juan</creatorcontrib><title>End-to-End Attention Pooling-Based Classification Method for Histopathology Images</title><description>The present disclosure provides an end-to-end attention pooling-based classification method for histopathological images. The method specifically includes the following steps: S1, cutting the histopathology image into patches of a specified size, removing the patches with too much background area and packaging the remaining patches into a bag; S2, training a deep learning network by taking the bag obtained in S1 as an input using a standard multi-instance learning method; S3, scoring all the patches by using the trained deep learning network, and selecting m patches with highest and lowest scores for each whole slide image to form a new bag; S4, building a deep learning network including an attention pooling module, and training the network by using the new bag obtained in S3; and S5, after the histopathology image to be classified is processed in S1 and S3, performing classification by using the model obtained in S4. The present disclosure can obtain a better classification effect under the current situation of only a small number of samples, provide an auxiliary diagnosis mechanism for doctors, and alleviate the problem of shortage of medical resources.</description><subject>CALCULATING</subject><subject>COMPUTER SYSTEMS BASED ON SPECIFIC COMPUTATIONAL MODELS</subject><subject>COMPUTING</subject><subject>COUNTING</subject><subject>HANDLING RECORD CARRIERS</subject><subject>IMAGE DATA PROCESSING OR GENERATION, IN GENERAL</subject><subject>PHYSICS</subject><subject>PRESENTATION OF DATA</subject><subject>RECOGNITION OF DATA</subject><subject>RECORD CARRIERS</subject><fulltext>true</fulltext><rsrctype>patent</rsrctype><creationdate>2022</creationdate><recordtype>patent</recordtype><sourceid>EVB</sourceid><recordid>eNqNissKwjAQAHvxIOo_BDwHbIrYay2VehDEx7kszSYGYja4e_HvLeIHeBqGmXlx6ZLVQnqCakQwSaCkzkQxJK_3wGhVG4E5uDDCN55QHmSVo5fqAwtlmDySf6vjEzzyspg5iIyrHxfF-tDd2l5jpgE5w4gJZbhfzcaYsq63u6opq_-uD6zqOKY</recordid><startdate>20220616</startdate><enddate>20220616</enddate><creator>Chen, Yuqi</creator><creator>Feng, Jing</creator><creator>Zuo, Zhiqun</creator><creator>Li, Zhuoyu</creator><creator>Liu, Juan</creator><scope>EVB</scope></search><sort><creationdate>20220616</creationdate><title>End-to-End Attention Pooling-Based Classification Method for Histopathology Images</title><author>Chen, Yuqi ; Feng, Jing ; Zuo, Zhiqun ; Li, Zhuoyu ; Liu, Juan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-epo_espacenet_US2022188573A13</frbrgroupid><rsrctype>patents</rsrctype><prefilter>patents</prefilter><language>eng</language><creationdate>2022</creationdate><topic>CALCULATING</topic><topic>COMPUTER SYSTEMS BASED ON SPECIFIC COMPUTATIONAL MODELS</topic><topic>COMPUTING</topic><topic>COUNTING</topic><topic>HANDLING RECORD CARRIERS</topic><topic>IMAGE DATA PROCESSING OR GENERATION, IN GENERAL</topic><topic>PHYSICS</topic><topic>PRESENTATION OF DATA</topic><topic>RECOGNITION OF DATA</topic><topic>RECORD CARRIERS</topic><toplevel>online_resources</toplevel><creatorcontrib>Chen, Yuqi</creatorcontrib><creatorcontrib>Feng, Jing</creatorcontrib><creatorcontrib>Zuo, Zhiqun</creatorcontrib><creatorcontrib>Li, Zhuoyu</creatorcontrib><creatorcontrib>Liu, Juan</creatorcontrib><collection>esp@cenet</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Chen, Yuqi</au><au>Feng, Jing</au><au>Zuo, Zhiqun</au><au>Li, Zhuoyu</au><au>Liu, Juan</au><format>patent</format><genre>patent</genre><ristype>GEN</ristype><title>End-to-End Attention Pooling-Based Classification Method for Histopathology Images</title><date>2022-06-16</date><risdate>2022</risdate><abstract>The present disclosure provides an end-to-end attention pooling-based classification method for histopathological images. The method specifically includes the following steps: S1, cutting the histopathology image into patches of a specified size, removing the patches with too much background area and packaging the remaining patches into a bag; S2, training a deep learning network by taking the bag obtained in S1 as an input using a standard multi-instance learning method; S3, scoring all the patches by using the trained deep learning network, and selecting m patches with highest and lowest scores for each whole slide image to form a new bag; S4, building a deep learning network including an attention pooling module, and training the network by using the new bag obtained in S3; and S5, after the histopathology image to be classified is processed in S1 and S3, performing classification by using the model obtained in S4. The present disclosure can obtain a better classification effect under the current situation of only a small number of samples, provide an auxiliary diagnosis mechanism for doctors, and alleviate the problem of shortage of medical resources.</abstract><oa>free_for_read</oa></addata></record> |
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subjects | CALCULATING COMPUTER SYSTEMS BASED ON SPECIFIC COMPUTATIONAL MODELS COMPUTING COUNTING HANDLING RECORD CARRIERS IMAGE DATA PROCESSING OR GENERATION, IN GENERAL PHYSICS PRESENTATION OF DATA RECOGNITION OF DATA RECORD CARRIERS |
title | End-to-End Attention Pooling-Based Classification Method for Histopathology Images |
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