Additional file 2 of The dynamic landscape of chromatin accessibility and active regulatory elements in the mediobasal hypothalamus influences the seasonal activation of the reproductive axis in the male quail under long light exposure
Additional file 2: Table S1. The library information of ATAC-seq. Table S2. The library information of transcriptome sequencing. Table S3. The library information of DAP-seq. Table S4. Transcription factor enrichment analysis results at the genome-wide level at SD28. Table S5. Transcription factor e...
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| creator | Chang, Jianye Xu, Yanglong Fu, Yuting Liu, Jiaxin Jiang, Danli Pan, Jianqiu Ouyang, Hongjia Liu, Wenjun Xu, Jin Tian, Yunbo Huang, Yunmao Ruan, Jue Shen, Xu |
| description | Additional file 2: Table S1. The library information of ATAC-seq. Table S2. The library information of transcriptome sequencing. Table S3. The library information of DAP-seq. Table S4. Transcription factor enrichment analysis results at the genome-wide level at SD28. Table S5. Transcription factor enrichment analysis results at the genome-wide level at LD3. Table S6. Transcription factor enrichment analysis results at the genome-wide level at LD7. Table S7. Transcription factor enrichment analysis results at the genome-wide level at LD28. Table S8. Differential analysis of chromatin regions and region annotations in all the comparison. Table S9. The unique DEGs in the SD28 vs LD7 comparison. Table S10. The unique DEGs in the SD28 vs LD28 comparison. Table S11. The Common DEGs between two comparison SD28 vs LD7 and SD28 vs LD28. Table S12. Detection of an overlapping gene in the atacUP_rnaUP region through combined analysis of ATAC-seq and RNA-seq at LD7. Table S13. Detection of an overlapping gene in the atacUP_rnaUP region through combined analysis of ATAC-seq and RNA-seq at LD28. |
| doi_str_mv | 10.6084/m9.figshare.26992996 |
| format | Dataset |
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The library information of ATAC-seq. Table S2. The library information of transcriptome sequencing. Table S3. The library information of DAP-seq. Table S4. Transcription factor enrichment analysis results at the genome-wide level at SD28. Table S5. Transcription factor enrichment analysis results at the genome-wide level at LD3. Table S6. Transcription factor enrichment analysis results at the genome-wide level at LD7. Table S7. Transcription factor enrichment analysis results at the genome-wide level at LD28. Table S8. Differential analysis of chromatin regions and region annotations in all the comparison. Table S9. The unique DEGs in the SD28 vs LD7 comparison. Table S10. The unique DEGs in the SD28 vs LD28 comparison. Table S11. The Common DEGs between two comparison SD28 vs LD7 and SD28 vs LD28. Table S12. Detection of an overlapping gene in the atacUP_rnaUP region through combined analysis of ATAC-seq and RNA-seq at LD7. Table S13. 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The library information of ATAC-seq. Table S2. The library information of transcriptome sequencing. Table S3. The library information of DAP-seq. Table S4. Transcription factor enrichment analysis results at the genome-wide level at SD28. Table S5. Transcription factor enrichment analysis results at the genome-wide level at LD3. Table S6. Transcription factor enrichment analysis results at the genome-wide level at LD7. Table S7. Transcription factor enrichment analysis results at the genome-wide level at LD28. Table S8. Differential analysis of chromatin regions and region annotations in all the comparison. Table S9. The unique DEGs in the SD28 vs LD7 comparison. Table S10. The unique DEGs in the SD28 vs LD28 comparison. Table S11. The Common DEGs between two comparison SD28 vs LD7 and SD28 vs LD28. Table S12. Detection of an overlapping gene in the atacUP_rnaUP region through combined analysis of ATAC-seq and RNA-seq at LD7. Table S13. 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| subjects | FOS: Biological sciences Genetics |
| title | Additional file 2 of The dynamic landscape of chromatin accessibility and active regulatory elements in the mediobasal hypothalamus influences the seasonal activation of the reproductive axis in the male quail under long light exposure |
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