fastq.zip

Accumulating literature suggests that the Farnesoid-X Receptor (FXR), a nuclear bile acid receptor best known for its role in bile acid homeostasis, is also a potent context-dependent regulator of inflammation. FXR may thus be relevant to several intestinal disease states including inflammatory bowe...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Hauptverfasser: Handler, David`, O'Guinn, Makayla, Hsieh, Jonathan, Mallicote, Michael, Gayer, Christopher P., feliciano, karina
Format: Dataset
Sprache:eng
Schlagworte:
Online-Zugang:Volltext bestellen
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page
container_issue
container_start_page
container_title
container_volume
creator Handler, David`
O'Guinn, Makayla
Hsieh, Jonathan
Mallicote, Michael
Gayer, Christopher P.
feliciano, karina
description Accumulating literature suggests that the Farnesoid-X Receptor (FXR), a nuclear bile acid receptor best known for its role in bile acid homeostasis, is also a potent context-dependent regulator of inflammation. FXR may thus be relevant to several intestinal disease states including inflammatory bowel disease, necrotizing enterocolitis, and sepsis. In this study, we tested the effects of FXR deletion on acute murine intestinal inflammation. We found that FXR knockout (KO) mice were protected from intestinal injury and barrier dysfunction induced by LPS injection, dithizone/Klebsiella, and cecal ligation/puncture models. In the LPS model, RNA sequencing and qPCR analysis showed that this protection correlated with substantial reduction in LPS-induced pro-inflammatory gene expression, including lower tissue levels of Il1a, Il1b, and Tnf. Examining functional effects on the epithelium, we found that LPS-induced tight junctional disruption as assessed by internalization of ZO-1 and occludin was ameliorated in FXR KO animals. Taken together, these data suggest a role for FXR in the intestinal barrier during inflammatory injury.
doi_str_mv 10.6084/m9.figshare.25901917
format Dataset
fullrecord <record><control><sourceid>datacite_PQ8</sourceid><recordid>TN_cdi_datacite_primary_10_6084_m9_figshare_25901917</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>10_6084_m9_figshare_25901917</sourcerecordid><originalsourceid>FETCH-datacite_primary_10_6084_m9_figshare_259019173</originalsourceid><addsrcrecordid>eNpjYJAxNNAzM7Aw0c-11EvLTC_OSCxK1TMytTQwtDQ052TgTEssLinUq8os4GFgTUvMKU7lhdLcDCZuriHOHropiSWJyZklqfEFRZm5iUWV8YYG8SAT43Mt42EmxsNMNCZTGwDhvjIZ</addsrcrecordid><sourcetype>Publisher</sourcetype><iscdi>true</iscdi><recordtype>dataset</recordtype></control><display><type>dataset</type><title>fastq.zip</title><source>DataCite</source><creator>Handler, David` ; O'Guinn, Makayla ; Hsieh, Jonathan ; Mallicote, Michael ; Gayer, Christopher P. ; feliciano, karina</creator><creatorcontrib>Handler, David` ; O'Guinn, Makayla ; Hsieh, Jonathan ; Mallicote, Michael ; Gayer, Christopher P. ; feliciano, karina</creatorcontrib><description>Accumulating literature suggests that the Farnesoid-X Receptor (FXR), a nuclear bile acid receptor best known for its role in bile acid homeostasis, is also a potent context-dependent regulator of inflammation. FXR may thus be relevant to several intestinal disease states including inflammatory bowel disease, necrotizing enterocolitis, and sepsis. In this study, we tested the effects of FXR deletion on acute murine intestinal inflammation. We found that FXR knockout (KO) mice were protected from intestinal injury and barrier dysfunction induced by LPS injection, dithizone/Klebsiella, and cecal ligation/puncture models. In the LPS model, RNA sequencing and qPCR analysis showed that this protection correlated with substantial reduction in LPS-induced pro-inflammatory gene expression, including lower tissue levels of Il1a, Il1b, and Tnf. Examining functional effects on the epithelium, we found that LPS-induced tight junctional disruption as assessed by internalization of ZO-1 and occludin was ameliorated in FXR KO animals. Taken together, these data suggest a role for FXR in the intestinal barrier during inflammatory injury.</description><identifier>DOI: 10.6084/m9.figshare.25901917</identifier><language>eng</language><publisher>figshare</publisher><subject>Genomics and transcriptomics</subject><creationdate>2024</creationdate><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><orcidid>0000-0003-0865-0262</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>780,1894</link.rule.ids><linktorsrc>$$Uhttps://commons.datacite.org/doi.org/10.6084/m9.figshare.25901917$$EView_record_in_DataCite.org$$FView_record_in_$$GDataCite.org$$Hfree_for_read</linktorsrc></links><search><creatorcontrib>Handler, David`</creatorcontrib><creatorcontrib>O'Guinn, Makayla</creatorcontrib><creatorcontrib>Hsieh, Jonathan</creatorcontrib><creatorcontrib>Mallicote, Michael</creatorcontrib><creatorcontrib>Gayer, Christopher P.</creatorcontrib><creatorcontrib>feliciano, karina</creatorcontrib><title>fastq.zip</title><description>Accumulating literature suggests that the Farnesoid-X Receptor (FXR), a nuclear bile acid receptor best known for its role in bile acid homeostasis, is also a potent context-dependent regulator of inflammation. FXR may thus be relevant to several intestinal disease states including inflammatory bowel disease, necrotizing enterocolitis, and sepsis. In this study, we tested the effects of FXR deletion on acute murine intestinal inflammation. We found that FXR knockout (KO) mice were protected from intestinal injury and barrier dysfunction induced by LPS injection, dithizone/Klebsiella, and cecal ligation/puncture models. In the LPS model, RNA sequencing and qPCR analysis showed that this protection correlated with substantial reduction in LPS-induced pro-inflammatory gene expression, including lower tissue levels of Il1a, Il1b, and Tnf. Examining functional effects on the epithelium, we found that LPS-induced tight junctional disruption as assessed by internalization of ZO-1 and occludin was ameliorated in FXR KO animals. Taken together, these data suggest a role for FXR in the intestinal barrier during inflammatory injury.</description><subject>Genomics and transcriptomics</subject><fulltext>true</fulltext><rsrctype>dataset</rsrctype><creationdate>2024</creationdate><recordtype>dataset</recordtype><sourceid>PQ8</sourceid><recordid>eNpjYJAxNNAzM7Aw0c-11EvLTC_OSCxK1TMytTQwtDQ052TgTEssLinUq8os4GFgTUvMKU7lhdLcDCZuriHOHropiSWJyZklqfEFRZm5iUWV8YYG8SAT43Mt42EmxsNMNCZTGwDhvjIZ</recordid><startdate>20240524</startdate><enddate>20240524</enddate><creator>Handler, David`</creator><creator>O'Guinn, Makayla</creator><creator>Hsieh, Jonathan</creator><creator>Mallicote, Michael</creator><creator>Gayer, Christopher P.</creator><creator>feliciano, karina</creator><general>figshare</general><scope>DYCCY</scope><scope>PQ8</scope><orcidid>https://orcid.org/0000-0003-0865-0262</orcidid></search><sort><creationdate>20240524</creationdate><title>fastq.zip</title><author>Handler, David` ; O'Guinn, Makayla ; Hsieh, Jonathan ; Mallicote, Michael ; Gayer, Christopher P. ; feliciano, karina</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-datacite_primary_10_6084_m9_figshare_259019173</frbrgroupid><rsrctype>datasets</rsrctype><prefilter>datasets</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Genomics and transcriptomics</topic><toplevel>online_resources</toplevel><creatorcontrib>Handler, David`</creatorcontrib><creatorcontrib>O'Guinn, Makayla</creatorcontrib><creatorcontrib>Hsieh, Jonathan</creatorcontrib><creatorcontrib>Mallicote, Michael</creatorcontrib><creatorcontrib>Gayer, Christopher P.</creatorcontrib><creatorcontrib>feliciano, karina</creatorcontrib><collection>DataCite (Open Access)</collection><collection>DataCite</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Handler, David`</au><au>O'Guinn, Makayla</au><au>Hsieh, Jonathan</au><au>Mallicote, Michael</au><au>Gayer, Christopher P.</au><au>feliciano, karina</au><format>book</format><genre>unknown</genre><ristype>DATA</ristype><title>fastq.zip</title><date>2024-05-24</date><risdate>2024</risdate><abstract>Accumulating literature suggests that the Farnesoid-X Receptor (FXR), a nuclear bile acid receptor best known for its role in bile acid homeostasis, is also a potent context-dependent regulator of inflammation. FXR may thus be relevant to several intestinal disease states including inflammatory bowel disease, necrotizing enterocolitis, and sepsis. In this study, we tested the effects of FXR deletion on acute murine intestinal inflammation. We found that FXR knockout (KO) mice were protected from intestinal injury and barrier dysfunction induced by LPS injection, dithizone/Klebsiella, and cecal ligation/puncture models. In the LPS model, RNA sequencing and qPCR analysis showed that this protection correlated with substantial reduction in LPS-induced pro-inflammatory gene expression, including lower tissue levels of Il1a, Il1b, and Tnf. Examining functional effects on the epithelium, we found that LPS-induced tight junctional disruption as assessed by internalization of ZO-1 and occludin was ameliorated in FXR KO animals. Taken together, these data suggest a role for FXR in the intestinal barrier during inflammatory injury.</abstract><pub>figshare</pub><doi>10.6084/m9.figshare.25901917</doi><orcidid>https://orcid.org/0000-0003-0865-0262</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext_linktorsrc
identifier DOI: 10.6084/m9.figshare.25901917
ispartof
issn
language eng
recordid cdi_datacite_primary_10_6084_m9_figshare_25901917
source DataCite
subjects Genomics and transcriptomics
title fastq.zip
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-08T01%3A10%3A02IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-datacite_PQ8&rft_val_fmt=info:ofi/fmt:kev:mtx:book&rft.genre=unknown&rft.au=Handler,%20David%60&rft.date=2024-05-24&rft_id=info:doi/10.6084/m9.figshare.25901917&rft_dat=%3Cdatacite_PQ8%3E10_6084_m9_figshare_25901917%3C/datacite_PQ8%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true