Additional file 2 of H3K36 methylation reprograms gene expression to drive early gametocyte development in Plasmodium falciparum

Additional file 2 of H3K36 methylation reprograms gene expression to drive early gametocyte development in Plasmodium falciparum

Additional file 2: Table S1. Pearson correlation of genome-wide read counts binned into 1 kb for corresponding biological replicates used for ChIP-seq. Table S2. Log2-transformed ChIP/input values for H3K36me2&3 occupancy upstream of 5602 P. falciparum genes in pre-stage II, stage II and post-st...

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Hauptverfasser: Connacher, Jessica, Josling, Gabrielle A., Orchard, Lindsey M., Reader, Janette, Llinás, Manuel, Birkholtz, Lyn-Marié
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creator Connacher, Jessica
Josling, Gabrielle A.
Orchard, Lindsey M.
Reader, Janette
Llinás, Manuel
Birkholtz, Lyn-Marié
description Additional file 2: Table S1. Pearson correlation of genome-wide read counts binned into 1 kb for corresponding biological replicates used for ChIP-seq. Table S2. Log2-transformed ChIP/input values for H3K36me2&3 occupancy upstream of 5602 P. falciparum genes in pre-stage II, stage II and post-stage II gametocytes. Table S3. Sites of H3K36me2&3 enrichment that were present in both biological replicates as determined by peak calling for stage II gametocytes. Table S4. Expression values on days 0 to 10 of gametocyte development for the gene nearest to each significant peak. Table S5. Gene ontology analysis results for biological processes significantly associated with H3K36me2&3-enriched gene sets in stage II gametocytes. Table S6. H3K36me2&3-enriched genes in stage II gametocytes previously identified as commitment- or early differentiation-related or associated with HP1, AP2-G2 or AP2-G2 in other studies [27, 30, 31, 36, 50–54, 58].
doi_str_mv 10.6084/m9.figshare.14361708
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title Additional file 2 of H3K36 methylation reprograms gene expression to drive early gametocyte development in Plasmodium falciparum
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