The S1 sequence alignment of Betacoronaviruses

The S1 sequence alignment of Betacoronaviruses has been performed with the ClustalW option using the Mega X program. The following abbreviations are applied: lhc – the lab host cells, lhm – the lab host mouse; and SARS-CoV – Severe acute respiratory syndrome coronavirus, PCoV – Pangolin coronavirus, BatSARSL-CoV – Bat SARS-like coronavirus, BatCoV – Bat coronavirus, BetaCoV – Betacoronavirus, RoCoV – Rodent coronavirus, RtCoV – Rat coronavirus, RouBatCoV – Rousettus bat coronavirus, HCoV – Human coronavirus, HBetaCoV – Human betacoronavirus, HECoV – Human enteritis coronavirus, EriHedCoV – Erinaceus Hedgehog coronavirus, PipBatCoV – Pipistrellus bat coronavirus, HypBatCoV – Hypsugo bat coronavirus, MERS-CoV – Middle East respiratory syndrome coronavirus, TylBatCoV – Tylonycteris bat coronavirus, PhiaffCoV – Rhinolophus affinis coronavirus, CoV-Neo – Coronavirus Neoromocia, EqCoV – Equine coronavirus, MHV – Murine hepatitis virus, MuCoV – Murine coronavirus, PHEV – Porcine hemagglutinating encephalomyelitis virus, RbCoV – Rabbit coronavirus, DcCoV – Dromedary camel coronavirus, CamCoV – Camel coronavirus, CRCoV – Canine respiratory coronavirus, BCoV – Bovine coronavirus, WatbuCoV – Waterbuck coronavirus, GirCoV – Giraffe coronavirus. The numbers in front of sequence annotation are the unique sequence numbers for each S/S1 sequence in the batch for each BetaCoV species for more comfortable use. The stars designate protein sequences deduced from nucleotide sequences using the GeneRunner program.