Additional file 9 of Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)
Additional file 9:Summary of LD estimates. The file contains the exact test for LD, genetic distances between pairs of SNP markers and minor allele frequencies (MAF) of alleles used for LD calculation. The pair-wise LD was measured using the squared allele-frequency correlations r2 according to Weir...
Gespeichert in:
| Hauptverfasser: | , , , , , , , , , , , , , , , , , , , |
|---|---|
| Format: | Dataset |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext bestellen |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | |
|---|---|
| container_issue | |
| container_start_page | |
| container_title | |
| container_volume | |
| creator | Shiaoman Chao Dubcovsky, Jorge Dvorak, Jan Luo, Ming-Cheng Baenziger, Stephen P Matnyazov, Rustam Clark, Dale R Talbert, Luther E Anderson, James A Dreisigacker, Susanne Glover, Karl Jianli Chen Campbell, Kim Bruckner, Phil L Rudd, Jackie C Haley, Scott Carver, Brett F Perry, Sid Sorrells, Mark E Akhunov, Eduard D |
| description | Additional file 9:Summary of LD estimates. The file contains the exact test for LD, genetic distances between pairs of SNP markers and minor allele frequencies (MAF) of alleles used for LD calculation. The pair-wise LD was measured using the squared allele-frequency correlations r2 according to Weir [50]. The statistical significance of individual r2 estimates was calculated by the exact test following the procedure described by Weir [50]. The false discovery rate (FDR) was established at 0.01 using the Benjamini & Hochberg method [52]. (XLSX 3 MB) |
| doi_str_mv | 10.6084/m9.figshare.12880589 |
| format | Dataset |
| fullrecord | <record><control><sourceid>datacite_PQ8</sourceid><recordid>TN_cdi_datacite_primary_10_6084_m9_figshare_12880589</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>10_6084_m9_figshare_12880589</sourcerecordid><originalsourceid>FETCH-LOGICAL-d919-11678c07e156654f737d376b8e9a4e2a526f577fe17b5d08670955888a4c9b5f3</originalsourceid><addsrcrecordid>eNo1kL1Ow0AQhN1QoMAbUFwJhc1d7Psro4g_KYJIpLfWvj1nhX02thPEs_Cy2IFUu9rZGY2-KLoRPFHcZPeNTTxVwx56TMTSGC6NvYx-Vs7RSG2AmnmqkVnWerZtu0MN8zlmEByrMLQNxkOHJXkqWQfjiH0Y5t-awgdUyBwN-HmgmoqeDs3J9v66ZUfo6ZTEKLCh6ylUJ-2LwhTBvvYII7vd9VOJcrbhMNJxWjbJ3VV04aEe8Pp_LqLd48Nu_Rxv3p5e1qtN7KywsRBKm5JrFFIpmXmdapdqVRi0kOES5FJ5qbVHoQvpuFGaWymNMZCVtpA-XUTZX6yDEUoaMZ9aNtB_54LnM7q8sfkZXX5Gl_4Cqntseg</addsrcrecordid><sourcetype>Publisher</sourcetype><iscdi>true</iscdi><recordtype>dataset</recordtype></control><display><type>dataset</type><title>Additional file 9 of Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)</title><source>DataCite</source><creator>Shiaoman Chao ; Dubcovsky, Jorge ; Dvorak, Jan ; Luo, Ming-Cheng ; Baenziger, Stephen P ; Matnyazov, Rustam ; Clark, Dale R ; Talbert, Luther E ; Anderson, James A ; Dreisigacker, Susanne ; Glover, Karl ; Jianli Chen ; Campbell, Kim ; Bruckner, Phil L ; Rudd, Jackie C ; Haley, Scott ; Carver, Brett F ; Perry, Sid ; Sorrells, Mark E ; Akhunov, Eduard D</creator><creatorcontrib>Shiaoman Chao ; Dubcovsky, Jorge ; Dvorak, Jan ; Luo, Ming-Cheng ; Baenziger, Stephen P ; Matnyazov, Rustam ; Clark, Dale R ; Talbert, Luther E ; Anderson, James A ; Dreisigacker, Susanne ; Glover, Karl ; Jianli Chen ; Campbell, Kim ; Bruckner, Phil L ; Rudd, Jackie C ; Haley, Scott ; Carver, Brett F ; Perry, Sid ; Sorrells, Mark E ; Akhunov, Eduard D</creatorcontrib><description>Additional file 9:Summary of LD estimates. The file contains the exact test for LD, genetic distances between pairs of SNP markers and minor allele frequencies (MAF) of alleles used for LD calculation. The pair-wise LD was measured using the squared allele-frequency correlations r2 according to Weir [50]. The statistical significance of individual r2 estimates was calculated by the exact test following the procedure described by Weir [50]. The false discovery rate (FDR) was established at 0.01 using the Benjamini & Hochberg method [52]. (XLSX 3 MB)</description><identifier>DOI: 10.6084/m9.figshare.12880589</identifier><language>eng</language><publisher>figshare</publisher><subject>FOS: Biological sciences ; Genetics</subject><creationdate>2020</creationdate><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>781,1895</link.rule.ids><linktorsrc>$$Uhttps://commons.datacite.org/doi.org/10.6084/m9.figshare.12880589$$EView_record_in_DataCite.org$$FView_record_in_$$GDataCite.org$$Hfree_for_read</linktorsrc></links><search><creatorcontrib>Shiaoman Chao</creatorcontrib><creatorcontrib>Dubcovsky, Jorge</creatorcontrib><creatorcontrib>Dvorak, Jan</creatorcontrib><creatorcontrib>Luo, Ming-Cheng</creatorcontrib><creatorcontrib>Baenziger, Stephen P</creatorcontrib><creatorcontrib>Matnyazov, Rustam</creatorcontrib><creatorcontrib>Clark, Dale R</creatorcontrib><creatorcontrib>Talbert, Luther E</creatorcontrib><creatorcontrib>Anderson, James A</creatorcontrib><creatorcontrib>Dreisigacker, Susanne</creatorcontrib><creatorcontrib>Glover, Karl</creatorcontrib><creatorcontrib>Jianli Chen</creatorcontrib><creatorcontrib>Campbell, Kim</creatorcontrib><creatorcontrib>Bruckner, Phil L</creatorcontrib><creatorcontrib>Rudd, Jackie C</creatorcontrib><creatorcontrib>Haley, Scott</creatorcontrib><creatorcontrib>Carver, Brett F</creatorcontrib><creatorcontrib>Perry, Sid</creatorcontrib><creatorcontrib>Sorrells, Mark E</creatorcontrib><creatorcontrib>Akhunov, Eduard D</creatorcontrib><title>Additional file 9 of Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)</title><description>Additional file 9:Summary of LD estimates. The file contains the exact test for LD, genetic distances between pairs of SNP markers and minor allele frequencies (MAF) of alleles used for LD calculation. The pair-wise LD was measured using the squared allele-frequency correlations r2 according to Weir [50]. The statistical significance of individual r2 estimates was calculated by the exact test following the procedure described by Weir [50]. The false discovery rate (FDR) was established at 0.01 using the Benjamini & Hochberg method [52]. (XLSX 3 MB)</description><subject>FOS: Biological sciences</subject><subject>Genetics</subject><fulltext>true</fulltext><rsrctype>dataset</rsrctype><creationdate>2020</creationdate><recordtype>dataset</recordtype><sourceid>PQ8</sourceid><recordid>eNo1kL1Ow0AQhN1QoMAbUFwJhc1d7Psro4g_KYJIpLfWvj1nhX02thPEs_Cy2IFUu9rZGY2-KLoRPFHcZPeNTTxVwx56TMTSGC6NvYx-Vs7RSG2AmnmqkVnWerZtu0MN8zlmEByrMLQNxkOHJXkqWQfjiH0Y5t-awgdUyBwN-HmgmoqeDs3J9v66ZUfo6ZTEKLCh6ylUJ-2LwhTBvvYII7vd9VOJcrbhMNJxWjbJ3VV04aEe8Pp_LqLd48Nu_Rxv3p5e1qtN7KywsRBKm5JrFFIpmXmdapdqVRi0kOES5FJ5qbVHoQvpuFGaWymNMZCVtpA-XUTZX6yDEUoaMZ9aNtB_54LnM7q8sfkZXX5Gl_4Cqntseg</recordid><startdate>20200827</startdate><enddate>20200827</enddate><creator>Shiaoman Chao</creator><creator>Dubcovsky, Jorge</creator><creator>Dvorak, Jan</creator><creator>Luo, Ming-Cheng</creator><creator>Baenziger, Stephen P</creator><creator>Matnyazov, Rustam</creator><creator>Clark, Dale R</creator><creator>Talbert, Luther E</creator><creator>Anderson, James A</creator><creator>Dreisigacker, Susanne</creator><creator>Glover, Karl</creator><creator>Jianli Chen</creator><creator>Campbell, Kim</creator><creator>Bruckner, Phil L</creator><creator>Rudd, Jackie C</creator><creator>Haley, Scott</creator><creator>Carver, Brett F</creator><creator>Perry, Sid</creator><creator>Sorrells, Mark E</creator><creator>Akhunov, Eduard D</creator><general>figshare</general><scope>DYCCY</scope><scope>PQ8</scope></search><sort><creationdate>20200827</creationdate><title>Additional file 9 of Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)</title><author>Shiaoman Chao ; Dubcovsky, Jorge ; Dvorak, Jan ; Luo, Ming-Cheng ; Baenziger, Stephen P ; Matnyazov, Rustam ; Clark, Dale R ; Talbert, Luther E ; Anderson, James A ; Dreisigacker, Susanne ; Glover, Karl ; Jianli Chen ; Campbell, Kim ; Bruckner, Phil L ; Rudd, Jackie C ; Haley, Scott ; Carver, Brett F ; Perry, Sid ; Sorrells, Mark E ; Akhunov, Eduard D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-d919-11678c07e156654f737d376b8e9a4e2a526f577fe17b5d08670955888a4c9b5f3</frbrgroupid><rsrctype>datasets</rsrctype><prefilter>datasets</prefilter><language>eng</language><creationdate>2020</creationdate><topic>FOS: Biological sciences</topic><topic>Genetics</topic><toplevel>online_resources</toplevel><creatorcontrib>Shiaoman Chao</creatorcontrib><creatorcontrib>Dubcovsky, Jorge</creatorcontrib><creatorcontrib>Dvorak, Jan</creatorcontrib><creatorcontrib>Luo, Ming-Cheng</creatorcontrib><creatorcontrib>Baenziger, Stephen P</creatorcontrib><creatorcontrib>Matnyazov, Rustam</creatorcontrib><creatorcontrib>Clark, Dale R</creatorcontrib><creatorcontrib>Talbert, Luther E</creatorcontrib><creatorcontrib>Anderson, James A</creatorcontrib><creatorcontrib>Dreisigacker, Susanne</creatorcontrib><creatorcontrib>Glover, Karl</creatorcontrib><creatorcontrib>Jianli Chen</creatorcontrib><creatorcontrib>Campbell, Kim</creatorcontrib><creatorcontrib>Bruckner, Phil L</creatorcontrib><creatorcontrib>Rudd, Jackie C</creatorcontrib><creatorcontrib>Haley, Scott</creatorcontrib><creatorcontrib>Carver, Brett F</creatorcontrib><creatorcontrib>Perry, Sid</creatorcontrib><creatorcontrib>Sorrells, Mark E</creatorcontrib><creatorcontrib>Akhunov, Eduard D</creatorcontrib><collection>DataCite (Open Access)</collection><collection>DataCite</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Shiaoman Chao</au><au>Dubcovsky, Jorge</au><au>Dvorak, Jan</au><au>Luo, Ming-Cheng</au><au>Baenziger, Stephen P</au><au>Matnyazov, Rustam</au><au>Clark, Dale R</au><au>Talbert, Luther E</au><au>Anderson, James A</au><au>Dreisigacker, Susanne</au><au>Glover, Karl</au><au>Jianli Chen</au><au>Campbell, Kim</au><au>Bruckner, Phil L</au><au>Rudd, Jackie C</au><au>Haley, Scott</au><au>Carver, Brett F</au><au>Perry, Sid</au><au>Sorrells, Mark E</au><au>Akhunov, Eduard D</au><format>book</format><genre>unknown</genre><ristype>DATA</ristype><title>Additional file 9 of Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)</title><date>2020-08-27</date><risdate>2020</risdate><abstract>Additional file 9:Summary of LD estimates. The file contains the exact test for LD, genetic distances between pairs of SNP markers and minor allele frequencies (MAF) of alleles used for LD calculation. The pair-wise LD was measured using the squared allele-frequency correlations r2 according to Weir [50]. The statistical significance of individual r2 estimates was calculated by the exact test following the procedure described by Weir [50]. The false discovery rate (FDR) was established at 0.01 using the Benjamini & Hochberg method [52]. (XLSX 3 MB)</abstract><pub>figshare</pub><doi>10.6084/m9.figshare.12880589</doi><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext_linktorsrc |
| identifier | DOI: 10.6084/m9.figshare.12880589 |
| ispartof | |
| issn | |
| language | eng |
| recordid | cdi_datacite_primary_10_6084_m9_figshare_12880589 |
| source | DataCite |
| subjects | FOS: Biological sciences Genetics |
| title | Additional file 9 of Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.) |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-14T07%3A59%3A38IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-datacite_PQ8&rft_val_fmt=info:ofi/fmt:kev:mtx:book&rft.genre=unknown&rft.au=Shiaoman%20Chao&rft.date=2020-08-27&rft_id=info:doi/10.6084/m9.figshare.12880589&rft_dat=%3Cdatacite_PQ8%3E10_6084_m9_figshare_12880589%3C/datacite_PQ8%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true |