An approximation strategy to compute accurate initial density matrices for repeated self-consistent field calculations at different geometries
Repeated computations on the same molecular system, but with different geometries, are often performed in quantum chemistry, for instance, in ab-initio molecular dynamics simulations or geometry optimisations. While many efficient strategies exist to provide a good guess for the self-consistent fiel...
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creator | Polack, É. Mikhalev, A. Dusson, G. Stamm, B. Lipparini, F. |
description | Repeated computations on the same molecular system, but with different geometries, are often performed in quantum chemistry, for instance, in ab-initio molecular dynamics simulations or geometry optimisations. While many efficient strategies exist to provide a good guess for the self-consistent field procedure, little is known on how to efficiently exploit the abundance of information generated during the many computations. In this article, we present a strategy to provide an accurate initial guess for the density matrix, expanded in a set of localised basis functions, within the self-consistent field iterations for parametrised Hartree–Fock problems where the nuclear coordinates are changed along with a few user-specified collective variables, such as the molecule's normal modes. Our approach is based on an offline-stage where the Hartree–Fock eigenvalue problem is solved for some particular parameter values and an online-stage where the initial guess is computed very efficiently for any new parameter value. The method allows nonlinear approximations of density matrices, which belong to a non-linear manifold that is isomorphic to the Grassmann manifold, by mapping such a manifold onto the tangent space. Numerical tests on different amino acids show promising initial results. |
doi_str_mv | 10.6084/m9.figshare.12854508 |
format | Dataset |
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While many efficient strategies exist to provide a good guess for the self-consistent field procedure, little is known on how to efficiently exploit the abundance of information generated during the many computations. In this article, we present a strategy to provide an accurate initial guess for the density matrix, expanded in a set of localised basis functions, within the self-consistent field iterations for parametrised Hartree–Fock problems where the nuclear coordinates are changed along with a few user-specified collective variables, such as the molecule's normal modes. Our approach is based on an offline-stage where the Hartree–Fock eigenvalue problem is solved for some particular parameter values and an online-stage where the initial guess is computed very efficiently for any new parameter value. The method allows nonlinear approximations of density matrices, which belong to a non-linear manifold that is isomorphic to the Grassmann manifold, by mapping such a manifold onto the tangent space. 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While many efficient strategies exist to provide a good guess for the self-consistent field procedure, little is known on how to efficiently exploit the abundance of information generated during the many computations. In this article, we present a strategy to provide an accurate initial guess for the density matrix, expanded in a set of localised basis functions, within the self-consistent field iterations for parametrised Hartree–Fock problems where the nuclear coordinates are changed along with a few user-specified collective variables, such as the molecule's normal modes. Our approach is based on an offline-stage where the Hartree–Fock eigenvalue problem is solved for some particular parameter values and an online-stage where the initial guess is computed very efficiently for any new parameter value. The method allows nonlinear approximations of density matrices, which belong to a non-linear manifold that is isomorphic to the Grassmann manifold, by mapping such a manifold onto the tangent space. 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While many efficient strategies exist to provide a good guess for the self-consistent field procedure, little is known on how to efficiently exploit the abundance of information generated during the many computations. In this article, we present a strategy to provide an accurate initial guess for the density matrix, expanded in a set of localised basis functions, within the self-consistent field iterations for parametrised Hartree–Fock problems where the nuclear coordinates are changed along with a few user-specified collective variables, such as the molecule's normal modes. Our approach is based on an offline-stage where the Hartree–Fock eigenvalue problem is solved for some particular parameter values and an online-stage where the initial guess is computed very efficiently for any new parameter value. The method allows nonlinear approximations of density matrices, which belong to a non-linear manifold that is isomorphic to the Grassmann manifold, by mapping such a manifold onto the tangent space. Numerical tests on different amino acids show promising initial results.</abstract><pub>Taylor & Francis</pub><doi>10.6084/m9.figshare.12854508</doi><oa>free_for_read</oa></addata></record> |
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subjects | Biological Sciences not elsewhere classified Biophysics Biotechnology Chemical Sciences not elsewhere classified Computational Biology Ecology FOS: Biological sciences Genetics Information Systems not elsewhere classified Mathematical Sciences not elsewhere classified Neuroscience Physical Sciences not elsewhere classified Physiology Plant Biology |
title | An approximation strategy to compute accurate initial density matrices for repeated self-consistent field calculations at different geometries |
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