CIL:55561, Homo sapiens. In Cell Image Library
Scan 14_E_TI_E -- The dataset consists of 951 tissue section scans taken from 167 H&E-stained whole slides from 18 pediatric inflammatory bowel disease (IBD) patients. Slide section scans are provided as-is without any initial image pre-processing, normalization, or cropping. Labels are provided...
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| creator | Martin-King, Chloe Nael, Ali Ehwerhemuepha, Louis Calvo, Blake Gates, Quinn Janchoi, Jamie Ornelas, Elisa Perez, Melissa Venderby, Andrea Miklavcic, John Chang, Peter Grant, Kenneth |
| description | Scan 14_E_TI_E -- The dataset consists of 951 tissue section scans taken from 167 H&E-stained whole slides from 18 pediatric inflammatory bowel disease (IBD) patients. Slide section scans are provided as-is without any initial image pre-processing, normalization, or cropping. Labels are provided at the patient, slide (anatomic site), and section (tissue slice) levels. Each slide is labelled with biopsy site and normal or abnormal classification per the surgical pathology report. Each tissue section scan from an abnormal slide is further classified as normal or abnormal by pathologist. Files may be viewed and annotated using standard, opensource slide-viewing software, such as Aperio ImageScope, OpenSlide, TiffSlide, and QuPath. |
| doi_str_mv | 10.6075/j0dv1k3j |
| format | Dataset |
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In Cell Image Library</title><source>DataCite</source><creator>Martin-King, Chloe ; Nael, Ali ; Ehwerhemuepha, Louis ; Calvo, Blake ; Gates, Quinn ; Janchoi, Jamie ; Ornelas, Elisa ; Perez, Melissa ; Venderby, Andrea ; Miklavcic, John ; Chang, Peter ; Grant, Kenneth</creator><creatorcontrib>Martin-King, Chloe ; Nael, Ali ; Ehwerhemuepha, Louis ; Calvo, Blake ; Gates, Quinn ; Janchoi, Jamie ; Ornelas, Elisa ; Perez, Melissa ; Venderby, Andrea ; Miklavcic, John ; Chang, Peter ; Grant, Kenneth</creatorcontrib><description>Scan 14_E_TI_E -- The dataset consists of 951 tissue section scans taken from 167 H&E-stained whole slides from 18 pediatric inflammatory bowel disease (IBD) patients. Slide section scans are provided as-is without any initial image pre-processing, normalization, or cropping. Labels are provided at the patient, slide (anatomic site), and section (tissue slice) levels. Each slide is labelled with biopsy site and normal or abnormal classification per the surgical pathology report. Each tissue section scan from an abnormal slide is further classified as normal or abnormal by pathologist. Files may be viewed and annotated using standard, opensource slide-viewing software, such as Aperio ImageScope, OpenSlide, TiffSlide, and QuPath.</description><identifier>DOI: 10.6075/j0dv1k3j</identifier><language>eng</language><publisher>UC San Diego Library Digital Collections</publisher><subject>Homo sapiens ; Pediatric inflamatory bowel disease</subject><creationdate>2024</creationdate><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>776,1888</link.rule.ids><linktorsrc>$$Uhttps://commons.datacite.org/doi.org/10.6075/j0dv1k3j$$EView_record_in_DataCite.org$$FView_record_in_$$GDataCite.org$$Hfree_for_read</linktorsrc></links><search><creatorcontrib>Martin-King, Chloe</creatorcontrib><creatorcontrib>Nael, Ali</creatorcontrib><creatorcontrib>Ehwerhemuepha, Louis</creatorcontrib><creatorcontrib>Calvo, Blake</creatorcontrib><creatorcontrib>Gates, Quinn</creatorcontrib><creatorcontrib>Janchoi, Jamie</creatorcontrib><creatorcontrib>Ornelas, Elisa</creatorcontrib><creatorcontrib>Perez, Melissa</creatorcontrib><creatorcontrib>Venderby, Andrea</creatorcontrib><creatorcontrib>Miklavcic, John</creatorcontrib><creatorcontrib>Chang, Peter</creatorcontrib><creatorcontrib>Grant, Kenneth</creatorcontrib><title>CIL:55561, Homo sapiens. In Cell Image Library</title><description>Scan 14_E_TI_E -- The dataset consists of 951 tissue section scans taken from 167 H&E-stained whole slides from 18 pediatric inflammatory bowel disease (IBD) patients. Slide section scans are provided as-is without any initial image pre-processing, normalization, or cropping. Labels are provided at the patient, slide (anatomic site), and section (tissue slice) levels. Each slide is labelled with biopsy site and normal or abnormal classification per the surgical pathology report. Each tissue section scan from an abnormal slide is further classified as normal or abnormal by pathologist. 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In Cell Image Library</title><date>2024</date><risdate>2024</risdate><abstract>Scan 14_E_TI_E -- The dataset consists of 951 tissue section scans taken from 167 H&E-stained whole slides from 18 pediatric inflammatory bowel disease (IBD) patients. Slide section scans are provided as-is without any initial image pre-processing, normalization, or cropping. Labels are provided at the patient, slide (anatomic site), and section (tissue slice) levels. Each slide is labelled with biopsy site and normal or abnormal classification per the surgical pathology report. Each tissue section scan from an abnormal slide is further classified as normal or abnormal by pathologist. Files may be viewed and annotated using standard, opensource slide-viewing software, such as Aperio ImageScope, OpenSlide, TiffSlide, and QuPath.</abstract><pub>UC San Diego Library Digital Collections</pub><doi>10.6075/j0dv1k3j</doi><oa>free_for_read</oa></addata></record> |
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| identifier | DOI: 10.6075/j0dv1k3j |
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| language | eng |
| recordid | cdi_datacite_primary_10_6075_j0dv1k3j |
| source | DataCite |
| subjects | Homo sapiens Pediatric inflamatory bowel disease |
| title | CIL:55561, Homo sapiens. In Cell Image Library |
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