Microscopy images - " Particulate matter constituents trigger the formation of extracellular amyloid β and Tau -containing plaques and neurite shortening in vitro"

This repository contains microscopy data from the manuscript "Particulate matter constituents trigger the formation of extracellular amyloid β and Tau -containing plaques and neurite shortening in vitro" by Aleksandar Sebastijanović, Laura Maria Azzurra Camassa, Vilhelm Malmborg, Slavko Kralj, Joakim Pagels, Ulla Vogel, Shan Zienolddiny-Narui, Iztok Urbančič, Tilen Koklič, and Janez Štrancar (published in Nanotoxicology, 18(4), 335–353. https://doi.org/10.1080/17435390.2024.2362367). Raw data are organized in folders named by image number, containing a subfolder with the date (year-day-month) of image acquisition. Followed by a subfolder named by a nanomaterial to which neurons were exposed. Each folder contains images from individual multi-channel, multi-position time-lapse experiments with different combinations of cells exposed to one nanomaterial. Files are named as: IMGxxxx_[ExperimentCode]_ROIxx_[Channel].tif, where each of the varying elements in [..] denotes the following:• [ExperimentCode]: a short name of the experiment• [Channel]: membrane (MEM), cytoplasm neuronal cells (NEU), nanomaterial (NANO), amyloid beta (AMY)