RicePilaf Dataset
Dataset for RicePilaf. RicePilaf is short for Rice Post-GWAS/QTL Analysis dashboard. Ok, so we are not great at acronyms; but like a flavorful rice pilaf that combines many ingredients, this RicePilaf combines information from multiple rice databases to provide insights into your QTL/GWAS loci. Mor...
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| creator | Shrestha, Anish M.S. Gonzales, Mark Edward M. Ong, Phoebe Clare L. Manlapaz, Josef Paolo A. |
| description | Dataset for RicePilaf. RicePilaf is short for Rice Post-GWAS/QTL Analysis dashboard. Ok, so we are not great at acronyms; but like a flavorful rice pilaf that combines many ingredients, this RicePilaf combines information from multiple rice databases to provide insights into your QTL/GWAS loci.
More details can be found in our paper "RicePilaf: a post-GWAS/QTL dashboard to integrate pangenomic, coexpression, regulatory, epigenomic, ontology, pathway, and text-mining information to provide functional insights into rice QTLs and GWAS loci," published in GigaScience. The project page is https://github.com/bioinfodlsu/rice-pilaf. Our paper can be accessed here: https://doi.org/10.1093/gigascience/giae013 |
| doi_str_mv | 10.5281/zenodo.13352975 |
| format | Dataset |
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More details can be found in our paper "RicePilaf: a post-GWAS/QTL dashboard to integrate pangenomic, coexpression, regulatory, epigenomic, ontology, pathway, and text-mining information to provide functional insights into rice QTLs and GWAS loci," published in GigaScience. The project page is https://github.com/bioinfodlsu/rice-pilaf. Our paper can be accessed here: https://doi.org/10.1093/gigascience/giae013</description><identifier>ISSN: 2047-217X</identifier><identifier>EISSN: 2047-217X</identifier><identifier>DOI: 10.5281/zenodo.13352975</identifier><language>eng</language><publisher>Oxford University Press</publisher><subject>Coexpression Network ; GWAS ; post-GWAS ; QTL analysis ; rice ; text mining ; transcription factor binding</subject><creationdate>2024</creationdate><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>777,781,1889,27907</link.rule.ids></links><search><creatorcontrib>Shrestha, Anish M.S.</creatorcontrib><creatorcontrib>Gonzales, Mark Edward M.</creatorcontrib><creatorcontrib>Ong, Phoebe Clare L.</creatorcontrib><creatorcontrib>Manlapaz, Josef Paolo A.</creatorcontrib><title>RicePilaf Dataset</title><description>Dataset for RicePilaf. RicePilaf is short for Rice Post-GWAS/QTL Analysis dashboard. Ok, so we are not great at acronyms; but like a flavorful rice pilaf that combines many ingredients, this RicePilaf combines information from multiple rice databases to provide insights into your QTL/GWAS loci.
More details can be found in our paper "RicePilaf: a post-GWAS/QTL dashboard to integrate pangenomic, coexpression, regulatory, epigenomic, ontology, pathway, and text-mining information to provide functional insights into rice QTLs and GWAS loci," published in GigaScience. The project page is https://github.com/bioinfodlsu/rice-pilaf. Our paper can be accessed here: https://doi.org/10.1093/gigascience/giae013</description><subject>Coexpression Network</subject><subject>GWAS</subject><subject>post-GWAS</subject><subject>QTL analysis</subject><subject>rice</subject><subject>text mining</subject><subject>transcription factor binding</subject><issn>2047-217X</issn><issn>2047-217X</issn><fulltext>true</fulltext><rsrctype>dataset</rsrctype><creationdate>2024</creationdate><recordtype>dataset</recordtype><sourceid>PQ8</sourceid><recordid>eNpjYBA3NNAzNbIw1K9KzctPydczNDY2NbI0N2Vi4DQyMDHXNTI0j2BBYnMw8BYXZxkAgbm5hYW5MSeDYFBmcmpAZk5imoJLYklicWoJDwNrWmJOcSovlOZm0HdzDXH20E0ByidnlqTGFxRl5iYWVcYbGsSDLI-HWB4Ps9yYdB0A7B43FQ</recordid><startdate>20240604</startdate><enddate>20240604</enddate><creator>Shrestha, Anish M.S.</creator><creator>Gonzales, Mark Edward M.</creator><creator>Ong, Phoebe Clare L.</creator><creator>Manlapaz, Josef Paolo A.</creator><general>Oxford University Press</general><scope>DYCCY</scope><scope>PQ8</scope></search><sort><creationdate>20240604</creationdate><title>RicePilaf Dataset</title><author>Shrestha, Anish M.S. ; Gonzales, Mark Edward M. ; Ong, Phoebe Clare L. ; Manlapaz, Josef Paolo A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-datacite_primary_10_5281_zenodo_133529753</frbrgroupid><rsrctype>datasets</rsrctype><prefilter>datasets</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Coexpression Network</topic><topic>GWAS</topic><topic>post-GWAS</topic><topic>QTL analysis</topic><topic>rice</topic><topic>text mining</topic><topic>transcription factor binding</topic><toplevel>online_resources</toplevel><creatorcontrib>Shrestha, Anish M.S.</creatorcontrib><creatorcontrib>Gonzales, Mark Edward M.</creatorcontrib><creatorcontrib>Ong, Phoebe Clare L.</creatorcontrib><creatorcontrib>Manlapaz, Josef Paolo A.</creatorcontrib><collection>DataCite (Open Access)</collection><collection>DataCite</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Shrestha, Anish M.S.</au><au>Gonzales, Mark Edward M.</au><au>Ong, Phoebe Clare L.</au><au>Manlapaz, Josef Paolo A.</au><format>book</format><genre>unknown</genre><ristype>DATA</ristype><title>RicePilaf Dataset</title><date>2024-06-04</date><risdate>2024</risdate><issn>2047-217X</issn><eissn>2047-217X</eissn><abstract>Dataset for RicePilaf. RicePilaf is short for Rice Post-GWAS/QTL Analysis dashboard. Ok, so we are not great at acronyms; but like a flavorful rice pilaf that combines many ingredients, this RicePilaf combines information from multiple rice databases to provide insights into your QTL/GWAS loci.
More details can be found in our paper "RicePilaf: a post-GWAS/QTL dashboard to integrate pangenomic, coexpression, regulatory, epigenomic, ontology, pathway, and text-mining information to provide functional insights into rice QTLs and GWAS loci," published in GigaScience. The project page is https://github.com/bioinfodlsu/rice-pilaf. Our paper can be accessed here: https://doi.org/10.1093/gigascience/giae013</abstract><pub>Oxford University Press</pub><doi>10.5281/zenodo.13352975</doi><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 2047-217X |
| ispartof | |
| issn | 2047-217X 2047-217X |
| language | eng |
| recordid | cdi_datacite_primary_10_5281_zenodo_13352975 |
| source | DataCite; Oxford Journals Open Access Collection; EZB-FREE-00999 freely available EZB journals; PubMed Central |
| subjects | Coexpression Network GWAS post-GWAS QTL analysis rice text mining transcription factor binding |
| title | RicePilaf Dataset |
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