FESNov gene families
Functionally and Evolutionarily Significant Novel (FESNov) gene family predictions. This repository includes: GTBD r202 taxonomic labels for all the genomes analyzed (genome2taxonomy.r202.tab) Plasflow and Seeker predictions for all the genomes analyzed (plasflow.json.gz and seeker.json.gz) Fasta fi...
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Format: | Dataset |
Sprache: | eng |
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Zusammenfassung: | Functionally and Evolutionarily Significant Novel (FESNov) gene family predictions. This repository includes:
GTBD r202 taxonomic labels for all the genomes analyzed (genome2taxonomy.r202.tab)
Plasflow and Seeker predictions for all the genomes analyzed (plasflow.json.gz and seeker.json.gz)
Fasta files for each FESNov gene family (FESNov_families.fasta.tar.gz)
Gene family trees for each FESNov gene family (FESNov_families.trees.tar.gz)
HMM profiles for each FESNov gene family (FESNov_families.hmm.tar.gz)
FESNov gene family statistics (FESNov_fams_stats.tab)
Functional predictions and habitat distribution of all FESNov gene families (FESNov_fams_funct_hab_info.json.gz)
FESNov gene family PDB files with structure predictions by AlphaFold (FESNov_families.pdb.tar.gz), and their associated pLDDT values (pLDDT_values.tab) |
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DOI: | 10.5281/zenodo.10219528 |