Viability Determination of Helicobacter pylori Using Propidium Monoazide Quantitative PCR

Background:  While Helicobacter pylori exists in a bacillary form in both the natural habitat and the human host, detrimental environmental circumstances have been observed to lead to the conversion of H. pylori from the bacillary to the coccoid form. However, the viability or nonviability of coccoi...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Helicobacter (Cambridge, Mass.) Mass.), 2010-10, Vol.15 (5), p.473-476
Hauptverfasser: Agustí, Gemma, Codony, Francesc, Fittipaldi, Mariana, Adrados, Bárbara, Morató, Jordi
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 476
container_issue 5
container_start_page 473
container_title Helicobacter (Cambridge, Mass.)
container_volume 15
creator Agustí, Gemma
Codony, Francesc
Fittipaldi, Mariana
Adrados, Bárbara
Morató, Jordi
description Background:  While Helicobacter pylori exists in a bacillary form in both the natural habitat and the human host, detrimental environmental circumstances have been observed to lead to the conversion of H. pylori from the bacillary to the coccoid form. However, the viability or nonviability of coccoid forms remains to be established in H. pylori. The aim of this study was to determine whether the quantitative PCR combined with propidium monoazide could be an alternative and good technique to determine H. pylori viability in environmental samples and, to contribute to understanding of the role of the H. pylori forms. Materials and Methods:  Viability, morphological distribution, and the number of live H. pylori cells were determined using a propidium monoazide‐based quantitative PCR method, at various time points. Results:  Under adverse environmental conditions was observed the conversion of H. pylori from the bacillary to the coccoid form, and the decrease in amplification signal, in samples that were treated with propidium monoazide, over the time. Conclusions:  Incorporation of propidium monoazide indicates that there is an increase in H. pylori cells with the damaged membrane over the study, leading to the manifestation of cellular degeneration and death. Consequently, quantitative PCR combined with propidium monoazide contributes to our understanding of the role of H. pylori cells, under adverse environmental conditions.
doi_str_mv 10.1111/j.1523-5378.2010.00794.x
format Article
fullrecord <record><control><sourceid>proquest_csuc_</sourceid><recordid>TN_cdi_csuc_recercat_oai_recercat_cat_2072_192527</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>860382472</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4794-4ae65d67095c9ae85d0d923e467efd8605ea9a96529c92366ed27e2efec6b29d3</originalsourceid><addsrcrecordid>eNqNkd9v0zAQxyMEYmPwLyC_8ZTiOP4RS7ygMlakMjbENsHLyXUuyCWJi51Ay1-Ps5byCJYsn---n7uTvllGCjor0nm5nhWClbkoVTVjNGUpVZrPtg-y02PhYYppVea8rPRJ9iTGNaVUlFw_zk7YVFGCn2afb51ZudYNO_IGBwyd683gfE98QxbYOutXxqY82exaHxy5ia7_Sq6C37jajR1573tvfrkayfVo-sENif6B5Gr-8Wn2qDFtxGeH9yy7eXv-ab7Ilx8u3s1fL3PL0845NyhFLRXVwmqDlahprVmJXCps6kpSgUYbLQXTNuWlxJopZNiglSum6_IsK_Z9bRwtBLQYrBnAG_f3M11GFYNCM8FUYl7smU3w30eMA3QuWmxb06MfI6SxZcW4Yv9W0opLru97Voc9go8xYAOb4DoTdlBQmFyDNUzmwGQOTK7BvWuwTejzw5Bx1WF9BP_YlASv9oKfrsXdfzeGxfkyBQnP97iLA26PuAnfQKo0AO4uL6C4W9zyL9cCLsvfxqu1Ag</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>808464927</pqid></control><display><type>article</type><title>Viability Determination of Helicobacter pylori Using Propidium Monoazide Quantitative PCR</title><source>MEDLINE</source><source>Access via Wiley Online Library</source><source>Recercat</source><creator>Agustí, Gemma ; Codony, Francesc ; Fittipaldi, Mariana ; Adrados, Bárbara ; Morató, Jordi</creator><creatorcontrib>Agustí, Gemma ; Codony, Francesc ; Fittipaldi, Mariana ; Adrados, Bárbara ; Morató, Jordi</creatorcontrib><description>Background:  While Helicobacter pylori exists in a bacillary form in both the natural habitat and the human host, detrimental environmental circumstances have been observed to lead to the conversion of H. pylori from the bacillary to the coccoid form. However, the viability or nonviability of coccoid forms remains to be established in H. pylori. The aim of this study was to determine whether the quantitative PCR combined with propidium monoazide could be an alternative and good technique to determine H. pylori viability in environmental samples and, to contribute to understanding of the role of the H. pylori forms. Materials and Methods:  Viability, morphological distribution, and the number of live H. pylori cells were determined using a propidium monoazide‐based quantitative PCR method, at various time points. Results:  Under adverse environmental conditions was observed the conversion of H. pylori from the bacillary to the coccoid form, and the decrease in amplification signal, in samples that were treated with propidium monoazide, over the time. Conclusions:  Incorporation of propidium monoazide indicates that there is an increase in H. pylori cells with the damaged membrane over the study, leading to the manifestation of cellular degeneration and death. Consequently, quantitative PCR combined with propidium monoazide contributes to our understanding of the role of H. pylori cells, under adverse environmental conditions.</description><identifier>ISSN: 1083-4389</identifier><identifier>EISSN: 1523-5378</identifier><identifier>DOI: 10.1111/j.1523-5378.2010.00794.x</identifier><identifier>PMID: 21083754</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Azides - metabolism ; Bacteriologia ; Bacteriological Techniques - methods ; Cells ; cellular viability ; Ciències de la salut ; coccoid forms ; Cèl·lules ; Degeneration ; Environmental conditions ; Environmental Microbiology ; Enzyme Inhibitors - metabolism ; Habitat ; Helicobacter ; Helicobacter pylori ; Helicobacter pylori - cytology ; Helicobacter pylori - genetics ; Helicobacter pylori - physiology ; Humans ; Medicina ; Microbial Viability ; Microscopy ; Nanotechnology ; Nanotecnologia ; Polymerase chain reaction ; Polymerase Chain Reaction - methods ; Propidium - analogs &amp; derivatives ; Propidium - metabolism ; propidium monoazide ; qPCR ; Àrees temàtiques de la UPC</subject><ispartof>Helicobacter (Cambridge, Mass.), 2010-10, Vol.15 (5), p.473-476</ispartof><rights>2010 Blackwell Publishing Ltd</rights><rights>2010 Blackwell Publishing Ltd.</rights><rights>info:eu-repo/semantics/openAccess</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4794-4ae65d67095c9ae85d0d923e467efd8605ea9a96529c92366ed27e2efec6b29d3</citedby><cites>FETCH-LOGICAL-c4794-4ae65d67095c9ae85d0d923e467efd8605ea9a96529c92366ed27e2efec6b29d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1523-5378.2010.00794.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1523-5378.2010.00794.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>230,314,780,784,885,1417,26974,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21083754$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Agustí, Gemma</creatorcontrib><creatorcontrib>Codony, Francesc</creatorcontrib><creatorcontrib>Fittipaldi, Mariana</creatorcontrib><creatorcontrib>Adrados, Bárbara</creatorcontrib><creatorcontrib>Morató, Jordi</creatorcontrib><title>Viability Determination of Helicobacter pylori Using Propidium Monoazide Quantitative PCR</title><title>Helicobacter (Cambridge, Mass.)</title><addtitle>Helicobacter</addtitle><description>Background:  While Helicobacter pylori exists in a bacillary form in both the natural habitat and the human host, detrimental environmental circumstances have been observed to lead to the conversion of H. pylori from the bacillary to the coccoid form. However, the viability or nonviability of coccoid forms remains to be established in H. pylori. The aim of this study was to determine whether the quantitative PCR combined with propidium monoazide could be an alternative and good technique to determine H. pylori viability in environmental samples and, to contribute to understanding of the role of the H. pylori forms. Materials and Methods:  Viability, morphological distribution, and the number of live H. pylori cells were determined using a propidium monoazide‐based quantitative PCR method, at various time points. Results:  Under adverse environmental conditions was observed the conversion of H. pylori from the bacillary to the coccoid form, and the decrease in amplification signal, in samples that were treated with propidium monoazide, over the time. Conclusions:  Incorporation of propidium monoazide indicates that there is an increase in H. pylori cells with the damaged membrane over the study, leading to the manifestation of cellular degeneration and death. Consequently, quantitative PCR combined with propidium monoazide contributes to our understanding of the role of H. pylori cells, under adverse environmental conditions.</description><subject>Azides - metabolism</subject><subject>Bacteriologia</subject><subject>Bacteriological Techniques - methods</subject><subject>Cells</subject><subject>cellular viability</subject><subject>Ciències de la salut</subject><subject>coccoid forms</subject><subject>Cèl·lules</subject><subject>Degeneration</subject><subject>Environmental conditions</subject><subject>Environmental Microbiology</subject><subject>Enzyme Inhibitors - metabolism</subject><subject>Habitat</subject><subject>Helicobacter</subject><subject>Helicobacter pylori</subject><subject>Helicobacter pylori - cytology</subject><subject>Helicobacter pylori - genetics</subject><subject>Helicobacter pylori - physiology</subject><subject>Humans</subject><subject>Medicina</subject><subject>Microbial Viability</subject><subject>Microscopy</subject><subject>Nanotechnology</subject><subject>Nanotecnologia</subject><subject>Polymerase chain reaction</subject><subject>Polymerase Chain Reaction - methods</subject><subject>Propidium - analogs &amp; derivatives</subject><subject>Propidium - metabolism</subject><subject>propidium monoazide</subject><subject>qPCR</subject><subject>Àrees temàtiques de la UPC</subject><issn>1083-4389</issn><issn>1523-5378</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>XX2</sourceid><recordid>eNqNkd9v0zAQxyMEYmPwLyC_8ZTiOP4RS7ygMlakMjbENsHLyXUuyCWJi51Ay1-Ps5byCJYsn---n7uTvllGCjor0nm5nhWClbkoVTVjNGUpVZrPtg-y02PhYYppVea8rPRJ9iTGNaVUlFw_zk7YVFGCn2afb51ZudYNO_IGBwyd683gfE98QxbYOutXxqY82exaHxy5ia7_Sq6C37jajR1573tvfrkayfVo-sENif6B5Gr-8Wn2qDFtxGeH9yy7eXv-ab7Ilx8u3s1fL3PL0845NyhFLRXVwmqDlahprVmJXCps6kpSgUYbLQXTNuWlxJopZNiglSum6_IsK_Z9bRwtBLQYrBnAG_f3M11GFYNCM8FUYl7smU3w30eMA3QuWmxb06MfI6SxZcW4Yv9W0opLru97Voc9go8xYAOb4DoTdlBQmFyDNUzmwGQOTK7BvWuwTejzw5Bx1WF9BP_YlASv9oKfrsXdfzeGxfkyBQnP97iLA26PuAnfQKo0AO4uL6C4W9zyL9cCLsvfxqu1Ag</recordid><startdate>201010</startdate><enddate>201010</enddate><creator>Agustí, Gemma</creator><creator>Codony, Francesc</creator><creator>Fittipaldi, Mariana</creator><creator>Adrados, Bárbara</creator><creator>Morató, Jordi</creator><general>Blackwell Publishing Ltd</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QL</scope><scope>C1K</scope><scope>XX2</scope></search><sort><creationdate>201010</creationdate><title>Viability Determination of Helicobacter pylori Using Propidium Monoazide Quantitative PCR</title><author>Agustí, Gemma ; Codony, Francesc ; Fittipaldi, Mariana ; Adrados, Bárbara ; Morató, Jordi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4794-4ae65d67095c9ae85d0d923e467efd8605ea9a96529c92366ed27e2efec6b29d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Azides - metabolism</topic><topic>Bacteriologia</topic><topic>Bacteriological Techniques - methods</topic><topic>Cells</topic><topic>cellular viability</topic><topic>Ciències de la salut</topic><topic>coccoid forms</topic><topic>Cèl·lules</topic><topic>Degeneration</topic><topic>Environmental conditions</topic><topic>Environmental Microbiology</topic><topic>Enzyme Inhibitors - metabolism</topic><topic>Habitat</topic><topic>Helicobacter</topic><topic>Helicobacter pylori</topic><topic>Helicobacter pylori - cytology</topic><topic>Helicobacter pylori - genetics</topic><topic>Helicobacter pylori - physiology</topic><topic>Humans</topic><topic>Medicina</topic><topic>Microbial Viability</topic><topic>Microscopy</topic><topic>Nanotechnology</topic><topic>Nanotecnologia</topic><topic>Polymerase chain reaction</topic><topic>Polymerase Chain Reaction - methods</topic><topic>Propidium - analogs &amp; derivatives</topic><topic>Propidium - metabolism</topic><topic>propidium monoazide</topic><topic>qPCR</topic><topic>Àrees temàtiques de la UPC</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Agustí, Gemma</creatorcontrib><creatorcontrib>Codony, Francesc</creatorcontrib><creatorcontrib>Fittipaldi, Mariana</creatorcontrib><creatorcontrib>Adrados, Bárbara</creatorcontrib><creatorcontrib>Morató, Jordi</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Recercat</collection><jtitle>Helicobacter (Cambridge, Mass.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Agustí, Gemma</au><au>Codony, Francesc</au><au>Fittipaldi, Mariana</au><au>Adrados, Bárbara</au><au>Morató, Jordi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Viability Determination of Helicobacter pylori Using Propidium Monoazide Quantitative PCR</atitle><jtitle>Helicobacter (Cambridge, Mass.)</jtitle><addtitle>Helicobacter</addtitle><date>2010-10</date><risdate>2010</risdate><volume>15</volume><issue>5</issue><spage>473</spage><epage>476</epage><pages>473-476</pages><issn>1083-4389</issn><eissn>1523-5378</eissn><abstract>Background:  While Helicobacter pylori exists in a bacillary form in both the natural habitat and the human host, detrimental environmental circumstances have been observed to lead to the conversion of H. pylori from the bacillary to the coccoid form. However, the viability or nonviability of coccoid forms remains to be established in H. pylori. The aim of this study was to determine whether the quantitative PCR combined with propidium monoazide could be an alternative and good technique to determine H. pylori viability in environmental samples and, to contribute to understanding of the role of the H. pylori forms. Materials and Methods:  Viability, morphological distribution, and the number of live H. pylori cells were determined using a propidium monoazide‐based quantitative PCR method, at various time points. Results:  Under adverse environmental conditions was observed the conversion of H. pylori from the bacillary to the coccoid form, and the decrease in amplification signal, in samples that were treated with propidium monoazide, over the time. Conclusions:  Incorporation of propidium monoazide indicates that there is an increase in H. pylori cells with the damaged membrane over the study, leading to the manifestation of cellular degeneration and death. Consequently, quantitative PCR combined with propidium monoazide contributes to our understanding of the role of H. pylori cells, under adverse environmental conditions.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>21083754</pmid><doi>10.1111/j.1523-5378.2010.00794.x</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1083-4389
ispartof Helicobacter (Cambridge, Mass.), 2010-10, Vol.15 (5), p.473-476
issn 1083-4389
1523-5378
language eng
recordid cdi_csuc_recercat_oai_recercat_cat_2072_192527
source MEDLINE; Access via Wiley Online Library; Recercat
subjects Azides - metabolism
Bacteriologia
Bacteriological Techniques - methods
Cells
cellular viability
Ciències de la salut
coccoid forms
Cèl·lules
Degeneration
Environmental conditions
Environmental Microbiology
Enzyme Inhibitors - metabolism
Habitat
Helicobacter
Helicobacter pylori
Helicobacter pylori - cytology
Helicobacter pylori - genetics
Helicobacter pylori - physiology
Humans
Medicina
Microbial Viability
Microscopy
Nanotechnology
Nanotecnologia
Polymerase chain reaction
Polymerase Chain Reaction - methods
Propidium - analogs & derivatives
Propidium - metabolism
propidium monoazide
qPCR
Àrees temàtiques de la UPC
title Viability Determination of Helicobacter pylori Using Propidium Monoazide Quantitative PCR
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-25T19%3A34%3A58IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_csuc_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Viability%20Determination%20of%20Helicobacter%20pylori%20Using%20Propidium%20Monoazide%20Quantitative%20PCR&rft.jtitle=Helicobacter%20(Cambridge,%20Mass.)&rft.au=Agust%C3%AD,%20Gemma&rft.date=2010-10&rft.volume=15&rft.issue=5&rft.spage=473&rft.epage=476&rft.pages=473-476&rft.issn=1083-4389&rft.eissn=1523-5378&rft_id=info:doi/10.1111/j.1523-5378.2010.00794.x&rft_dat=%3Cproquest_csuc_%3E860382472%3C/proquest_csuc_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=808464927&rft_id=info:pmid/21083754&rfr_iscdi=true