Detection of polymorphism in booroola gene and growth differentiation factor 9 in Lori sheep breed

Purpose: This study was carried out for detection of possible polymorphisms in Booroola gene (FecB) and growth differentiation factor 9 [GDF9] in Lori sheep breed. Methods: Blood samples were taken from the jugular vein of the sheep and their DNA content extracted using modified salting-out method....

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Veröffentlicht in:Tropical journal of pharmaceutical research 2016-09, Vol.15 (8), p.1605
Hauptverfasser: Nanekarani, Shahram, Goodarzi, Majid, Khederzadeh, Saber, Torabi, Salman, Landy, Nasir
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container_issue 8
container_start_page 1605
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creator Nanekarani, Shahram
Goodarzi, Majid
Khederzadeh, Saber
Torabi, Salman
Landy, Nasir
description Purpose: This study was carried out for detection of possible polymorphisms in Booroola gene (FecB) and growth differentiation factor 9 [GDF9] in Lori sheep breed. Methods: Blood samples were taken from the jugular vein of the sheep and their DNA content extracted using modified salting-out method. The quantity and quality of extracted DNA was examined by absorption spectrophotometry and gel electrophoresis. Using two pairs of specific primers, two DNA fragments were amplified from FecB (190 bp) and exon 1 of GDF9 (462 bp) genes. The polymerase chain reaction (PCR) products were digested using AvaII and HhaI restriction enzymes for FecB and GDF9 genes, respectively. Results: In FecB locus, two genotypes, viz, wild type (+/+) and carrier-mutants (B/+), were detected with genotype frequencies of 0.948 and 0.052, respectively. Also, at GDF9 locus, two genotypes, namely, wild type (+/+) and carrier-mutants (+/-), were detected with genotype frequencies of 0.67 and 0.33, respectively. Heterozygous genotype frequencies for both loci showed higher than homozygous genotypes. None of the sheep carried homozygous genotype for both of the FecB and GDF9 variants in this breed. Conclusion: The results of the present study reveal slight polymorphism in FecB and GDF9 loci of Lori sheep breed.
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Methods: Blood samples were taken from the jugular vein of the sheep and their DNA content extracted using modified salting-out method. The quantity and quality of extracted DNA was examined by absorption spectrophotometry and gel electrophoresis. Using two pairs of specific primers, two DNA fragments were amplified from FecB (190 bp) and exon 1 of GDF9 (462 bp) genes. The polymerase chain reaction (PCR) products were digested using AvaII and HhaI restriction enzymes for FecB and GDF9 genes, respectively. Results: In FecB locus, two genotypes, viz, wild type (+/+) and carrier-mutants (B/+), were detected with genotype frequencies of 0.948 and 0.052, respectively. Also, at GDF9 locus, two genotypes, namely, wild type (+/+) and carrier-mutants (+/-), were detected with genotype frequencies of 0.67 and 0.33, respectively. Heterozygous genotype frequencies for both loci showed higher than homozygous genotypes. None of the sheep carried homozygous genotype for both of the FecB and GDF9 variants in this breed. Conclusion: The results of the present study reveal slight polymorphism in FecB and GDF9 loci of Lori sheep breed.</description><identifier>ISSN: 1596-5996</identifier><identifier>EISSN: 1596-9827</identifier><identifier>DOI: 10.4314/tjpr.v15i8.2</identifier><language>eng</language><publisher>Pharmacotherapy Group, Faculty of Pharmacy, University of Benin, Benin City, Nigeria</publisher><subject>Booroola gene (FecB) ; Genotype ; Growth differentiation factor 9 (GDF9) ; Loci ; Lori sheep ; Mutants ; Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) ; Polymorphism</subject><ispartof>Tropical journal of pharmaceutical research, 2016-09, Vol.15 (8), p.1605</ispartof><rights>Copyright 2016 - Tropical Journal of Pharmaceutical Research</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b340t-4c535bd181f349ade7d1c5c5b33d4ff513a4df3fa3ebdfc6fe25810be35dba423</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,860,27903,27904,79172</link.rule.ids></links><search><creatorcontrib>Nanekarani, Shahram</creatorcontrib><creatorcontrib>Goodarzi, Majid</creatorcontrib><creatorcontrib>Khederzadeh, Saber</creatorcontrib><creatorcontrib>Torabi, Salman</creatorcontrib><creatorcontrib>Landy, Nasir</creatorcontrib><title>Detection of polymorphism in booroola gene and growth differentiation factor 9 in Lori sheep breed</title><title>Tropical journal of pharmaceutical research</title><description>Purpose: This study was carried out for detection of possible polymorphisms in Booroola gene (FecB) and growth differentiation factor 9 [GDF9] in Lori sheep breed. Methods: Blood samples were taken from the jugular vein of the sheep and their DNA content extracted using modified salting-out method. The quantity and quality of extracted DNA was examined by absorption spectrophotometry and gel electrophoresis. Using two pairs of specific primers, two DNA fragments were amplified from FecB (190 bp) and exon 1 of GDF9 (462 bp) genes. The polymerase chain reaction (PCR) products were digested using AvaII and HhaI restriction enzymes for FecB and GDF9 genes, respectively. Results: In FecB locus, two genotypes, viz, wild type (+/+) and carrier-mutants (B/+), were detected with genotype frequencies of 0.948 and 0.052, respectively. Also, at GDF9 locus, two genotypes, namely, wild type (+/+) and carrier-mutants (+/-), were detected with genotype frequencies of 0.67 and 0.33, respectively. Heterozygous genotype frequencies for both loci showed higher than homozygous genotypes. None of the sheep carried homozygous genotype for both of the FecB and GDF9 variants in this breed. Conclusion: The results of the present study reveal slight polymorphism in FecB and GDF9 loci of Lori sheep breed.</description><subject>Booroola gene (FecB)</subject><subject>Genotype</subject><subject>Growth differentiation factor 9 (GDF9)</subject><subject>Loci</subject><subject>Lori sheep</subject><subject>Mutants</subject><subject>Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP)</subject><subject>Polymorphism</subject><issn>1596-5996</issn><issn>1596-9827</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>RBI</sourceid><recordid>eNpFkNtKAzEQhoMoWKt3PkAewF2TTbLdXEo9QsEbvQ45TNqU7WZJgtK3122LwsAMP98_Fx9Ct5TUnFF-X7Zjqr-oCF3dnKEZFbKtZNcszk-3kLK9RFc5bwkRrZR0hswjFLAlxAFHj8fY73cxjZuQdzgM2MSYYuw1XsMAWA8Or1P8LhvsgveQYChBH7pe2xITllNpFVPAeQMwYpMA3DW68LrPcHPac_T5_PSxfK1W7y9vy4dVZRgnpeJWMGEc7ahnXGoHC0etsMIw5rj3gjLNnWdeMzDO29ZDIzpKDDDhjOYNm6O741-bYs4JvBpT2Om0V5SoyY-a_KiDHzXh9RE3IfZhgD_apqDVf_g7tG0oYT8-x24j</recordid><startdate>20160905</startdate><enddate>20160905</enddate><creator>Nanekarani, Shahram</creator><creator>Goodarzi, Majid</creator><creator>Khederzadeh, Saber</creator><creator>Torabi, Salman</creator><creator>Landy, Nasir</creator><general>Pharmacotherapy Group, Faculty of Pharmacy, University of Benin, Benin City, Nigeria</general><scope>RBI</scope><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>20160905</creationdate><title>Detection of polymorphism in booroola gene and growth differentiation factor 9 in Lori sheep breed</title><author>Nanekarani, Shahram ; Goodarzi, Majid ; Khederzadeh, Saber ; Torabi, Salman ; Landy, Nasir</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b340t-4c535bd181f349ade7d1c5c5b33d4ff513a4df3fa3ebdfc6fe25810be35dba423</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Booroola gene (FecB)</topic><topic>Genotype</topic><topic>Growth differentiation factor 9 (GDF9)</topic><topic>Loci</topic><topic>Lori sheep</topic><topic>Mutants</topic><topic>Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP)</topic><topic>Polymorphism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nanekarani, Shahram</creatorcontrib><creatorcontrib>Goodarzi, Majid</creatorcontrib><creatorcontrib>Khederzadeh, Saber</creatorcontrib><creatorcontrib>Torabi, Salman</creatorcontrib><creatorcontrib>Landy, Nasir</creatorcontrib><collection>Bioline International</collection><collection>CrossRef</collection><jtitle>Tropical journal of pharmaceutical research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nanekarani, Shahram</au><au>Goodarzi, Majid</au><au>Khederzadeh, Saber</au><au>Torabi, Salman</au><au>Landy, Nasir</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Detection of polymorphism in booroola gene and growth differentiation factor 9 in Lori sheep breed</atitle><jtitle>Tropical journal of pharmaceutical research</jtitle><date>2016-09-05</date><risdate>2016</risdate><volume>15</volume><issue>8</issue><spage>1605</spage><pages>1605-</pages><issn>1596-5996</issn><eissn>1596-9827</eissn><abstract>Purpose: This study was carried out for detection of possible polymorphisms in Booroola gene (FecB) and growth differentiation factor 9 [GDF9] in Lori sheep breed. Methods: Blood samples were taken from the jugular vein of the sheep and their DNA content extracted using modified salting-out method. The quantity and quality of extracted DNA was examined by absorption spectrophotometry and gel electrophoresis. Using two pairs of specific primers, two DNA fragments were amplified from FecB (190 bp) and exon 1 of GDF9 (462 bp) genes. The polymerase chain reaction (PCR) products were digested using AvaII and HhaI restriction enzymes for FecB and GDF9 genes, respectively. Results: In FecB locus, two genotypes, viz, wild type (+/+) and carrier-mutants (B/+), were detected with genotype frequencies of 0.948 and 0.052, respectively. Also, at GDF9 locus, two genotypes, namely, wild type (+/+) and carrier-mutants (+/-), were detected with genotype frequencies of 0.67 and 0.33, respectively. Heterozygous genotype frequencies for both loci showed higher than homozygous genotypes. None of the sheep carried homozygous genotype for both of the FecB and GDF9 variants in this breed. Conclusion: The results of the present study reveal slight polymorphism in FecB and GDF9 loci of Lori sheep breed.</abstract><pub>Pharmacotherapy Group, Faculty of Pharmacy, University of Benin, Benin City, Nigeria</pub><doi>10.4314/tjpr.v15i8.2</doi><oa>free_for_read</oa></addata></record>
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source African Journals Online (Open Access); Bioline International; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Free Full-Text Journals in Chemistry
subjects Booroola gene (FecB)
Genotype
Growth differentiation factor 9 (GDF9)
Loci
Lori sheep
Mutants
Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP)
Polymorphism
title Detection of polymorphism in booroola gene and growth differentiation factor 9 in Lori sheep breed
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